Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30041
         (346 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   4.7  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    20   6.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    20   6.2  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    20   8.2  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = -3

Query: 119 SDYANCNFAGLTFITRCYSFTVEVNREHLLSTYFIRK 9
           SDY N + A   F+ R     + +   HL     I K
Sbjct: 413 SDYQNKSLAAFDFVARNSDTPIILWTSHLTQADVIEK 449


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 202 FEGWGSRCNYTETLNLYLK 258
           F G+GS C  + +   YLK
Sbjct: 17  FPGFGSTCGGSSSSMAYLK 35


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 184 FTAEIGRAVVPT 149
           F   +GRAVVPT
Sbjct: 459 FPGGLGRAVVPT 470


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -1

Query: 208 LQTETHYCFTAEIGRAVVPTRADSQEV 128
           +QT+      + +G+  +PT  D QE+
Sbjct: 18  IQTKVREEILSVVGKEKIPTYNDLQEL 44


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,339
Number of Sequences: 336
Number of extensions: 1832
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6770240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)