Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30034
         (606 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_03_0166 - 13372878-13373031,13373487-13373528,13373590-133736...    29   3.8  
01_06_1473 - 37619415-37619561,37619649-37619723,37619800-376199...    28   6.6  
12_01_0704 + 6061461-6061873,6062149-6062891,6062994-6063451           27   8.7  
11_01_0584 - 4640982-4641439,4641541-4642273                           27   8.7  
10_03_0047 - 7358656-7359113,7359216-7359948                           27   8.7  
09_04_0293 - 16442989-16443446,16443548-16444280                       27   8.7  
07_03_0731 - 21031002-21031459,21031562-21032304,21032580-21032992     27   8.7  
03_05_0129 - 21102892-21103349,21103452-21104184                       27   8.7  
02_02_0561 - 11515641-11516145,11516290-11517005,11517204-11517824     27   8.7  

>01_03_0166 -
           13372878-13373031,13373487-13373528,13373590-13373669,
           13374513-13374593,13375032-13375115
          Length = 146

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +1

Query: 343 NMYMISHHPHNFPALLPVTWGRCNMLSPSILLYHTPFPRSLPF 471
           +M MIS+   N  +L+P+       L P++ + HTP P  +P+
Sbjct: 52  DMLMISN---NVTSLMPIGQDGLMSLGPALAMTHTPIPMIIPW 91


>01_06_1473 -
           37619415-37619561,37619649-37619723,37619800-37619919,
           37620074-37620127,37620204-37620426,37620506-37620585,
           37620675-37620764,37620847-37620960,37621192-37621272,
           37621383-37621490,37621677-37621722,37621802-37621899,
           37621975-37622148,37622456-37622548,37623229-37623285,
           37623399-37623438,37623567-37623685,37624179-37624298,
           37624723-37624815,37624940-37625251,37625325-37625444,
           37625545-37625658,37625731-37625910,37625996-37626110,
           37626195-37626358,37626584-37626769,37626888-37626978,
           37627089-37627153,37627223-37627297,37627410-37627493,
           37627575-37627742,37628160-37629293
          Length = 1579

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = +3

Query: 117 SWSQMTKVFFFDS*HIFKCCKSSIHYVDEAQPKDISFIVTSCSINQRPLLYCDVGLKIL 293
           SW  ++K     +      CK  +  VD   PKDIS ++TS ++   P++   V LK +
Sbjct: 524 SWLSISKFLACPATQRVSWCKFEVT-VDS--PKDISVLMTSTTLEVPPVVVAAVNLKTI 579


>12_01_0704 + 6061461-6061873,6062149-6062891,6062994-6063451
          Length = 537

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3

Query: 178 LQHLNMC*LSKKNTLVICDHE 116
           +QH N   ++ +N LVICDH+
Sbjct: 329 MQHRNRHHITTRNVLVICDHD 349


>11_01_0584 - 4640982-4641439,4641541-4642273
          Length = 396

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3

Query: 178 LQHLNMC*LSKKNTLVICDHE 116
           +QH N   ++ +N LVICDH+
Sbjct: 188 MQHRNRHHITTRNVLVICDHD 208


>10_03_0047 - 7358656-7359113,7359216-7359948
          Length = 396

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3

Query: 178 LQHLNMC*LSKKNTLVICDHE 116
           +QH N   ++ +N LVICDH+
Sbjct: 188 MQHRNRHHITTRNVLVICDHD 208


>09_04_0293 - 16442989-16443446,16443548-16444280
          Length = 396

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3

Query: 178 LQHLNMC*LSKKNTLVICDHE 116
           +QH N   ++ +N LVICDH+
Sbjct: 188 MQHRNRHHITTRNVLVICDHD 208


>07_03_0731 - 21031002-21031459,21031562-21032304,21032580-21032992
          Length = 537

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3

Query: 178 LQHLNMC*LSKKNTLVICDHE 116
           +QH N   ++ +N LVICDH+
Sbjct: 329 MQHRNRHHITTRNVLVICDHD 349


>03_05_0129 - 21102892-21103349,21103452-21104184
          Length = 396

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3

Query: 178 LQHLNMC*LSKKNTLVICDHE 116
           +QH N   ++ +N LVICDH+
Sbjct: 188 MQHRNRHHITTRNVLVICDHD 208


>02_02_0561 - 11515641-11516145,11516290-11517005,11517204-11517824
          Length = 613

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +1

Query: 367 PHNFPALLPVTWGRCNMLSPSILLYHTPFPRSLPFYTYRL 486
           PH     + VT G   +LSP++  YH    RS+  Y   L
Sbjct: 273 PHLAMCAIMVTVGVLTLLSPALRHYHPTHHRSIMLYDINL 312


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,308,698
Number of Sequences: 37544
Number of extensions: 305288
Number of successful extensions: 615
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 614
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1442939384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)