Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30034
         (606 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL731551-1|CAI40246.1| 3623|Homo sapiens cubilin (intrinsic fact...    30   7.3  
AL596445-1|CAH72450.1| 3623|Homo sapiens cubilin (intrinsic fact...    30   7.3  
AL365215-1|CAH73630.1| 3623|Homo sapiens cubilin (intrinsic fact...    30   7.3  
AF243129-1|AAK61830.1| 3494|Homo sapiens intrinsic factor-vitami...    30   7.3  
AF034611-1|AAC82612.1| 3623|Homo sapiens intrinsic factor-B12 re...    30   7.3  

>AL731551-1|CAI40246.1| 3623|Homo sapiens cubilin (intrinsic
            factor-cobalamin receptor) protein.
          Length = 3623

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 422  LLPYSSIIHHFLAHSPFTHIAFHAIHPF 505
            ++PYS +  HF+ +    HI FHA + F
Sbjct: 2659 VIPYSQVWIHFVTNERVEHIGFHAKYSF 2686


>AL596445-1|CAH72450.1| 3623|Homo sapiens cubilin (intrinsic
            factor-cobalamin receptor) protein.
          Length = 3623

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 422  LLPYSSIIHHFLAHSPFTHIAFHAIHPF 505
            ++PYS +  HF+ +    HI FHA + F
Sbjct: 2659 VIPYSQVWIHFVTNERVEHIGFHAKYSF 2686


>AL365215-1|CAH73630.1| 3623|Homo sapiens cubilin (intrinsic
            factor-cobalamin receptor) protein.
          Length = 3623

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 422  LLPYSSIIHHFLAHSPFTHIAFHAIHPF 505
            ++PYS +  HF+ +    HI FHA + F
Sbjct: 2659 VIPYSQVWIHFVTNERVEHIGFHAKYSF 2686


>AF243129-1|AAK61830.1| 3494|Homo sapiens intrinsic factor-vitamin B12
            receptor protein.
          Length = 3494

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 422  LLPYSSIIHHFLAHSPFTHIAFHAIHPF 505
            ++PYS +  HF+ +    HI FHA + F
Sbjct: 2530 VIPYSQVWIHFVTNERVEHIGFHAKYSF 2557


>AF034611-1|AAC82612.1| 3623|Homo sapiens intrinsic factor-B12
            receptor precursor protein.
          Length = 3623

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 422  LLPYSSIIHHFLAHSPFTHIAFHAIHPF 505
            ++PYS +  HF+ +    HI FHA + F
Sbjct: 2659 VIPYSQVWIHFVTNERVEHIGFHAKYSF 2686


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,432,738
Number of Sequences: 237096
Number of extensions: 1772746
Number of successful extensions: 2591
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2591
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)