Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30033
(638 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32676| Best HMM Match : adh_short (HMM E-Value=1.2e-05) 73 1e-13
SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34) 70 2e-12
SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32) 69 2e-12
SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 3e-12
SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34) 60 1e-09
SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 4e-08
SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11) 54 1e-07
SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15) 53 2e-07
SB_26063| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15) 50 1e-06
SB_28806| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23) 46 2e-05
SB_8042| Best HMM Match : DUF803 (HMM E-Value=0) 43 2e-04
SB_38785| Best HMM Match : adh_short (HMM E-Value=2.4e-06) 43 2e-04
SB_27289| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_5928| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_5208| Best HMM Match : adh_short (HMM E-Value=1.1e-05) 41 0.001
SB_12716| Best HMM Match : E3_binding (HMM E-Value=9.7) 40 0.001
SB_21622| Best HMM Match : adh_short (HMM E-Value=3.1e-05) 40 0.002
SB_35940| Best HMM Match : adh_short (HMM E-Value=0.00021) 40 0.002
SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10) 40 0.002
SB_50727| Best HMM Match : adh_short (HMM E-Value=8.9e-08) 38 0.005
SB_6722| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.021
SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33) 36 0.028
SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45) 36 0.028
SB_9398| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.049
SB_13156| Best HMM Match : adh_short (HMM E-Value=0.00022) 35 0.064
SB_44870| Best HMM Match : adh_short (HMM E-Value=5.4e-11) 34 0.11
SB_40186| Best HMM Match : Extensin_2 (HMM E-Value=0.0036) 34 0.11
SB_33638| Best HMM Match : adh_short (HMM E-Value=0.0014) 33 0.26
SB_52724| Best HMM Match : adh_short (HMM E-Value=5.1e-08) 32 0.34
SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) 32 0.34
SB_27292| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_47084| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.79
SB_14553| Best HMM Match : adh_short (HMM E-Value=4.2e-08) 31 1.0
SB_45640| Best HMM Match : Epimerase (HMM E-Value=9.4e-38) 29 3.2
SB_41907| Best HMM Match : Reprolysin (HMM E-Value=9.2e-05) 29 3.2
SB_7777| Best HMM Match : adh_short (HMM E-Value=0.083) 29 3.2
SB_25711| Best HMM Match : Oxidored_q1_N (HMM E-Value=3) 29 3.2
SB_53258| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_22927| Best HMM Match : SerH (HMM E-Value=1.1) 29 4.2
SB_34916| Best HMM Match : adh_short (HMM E-Value=4.8e-06) 29 4.2
SB_24597| Best HMM Match : RNA_pol_delta (HMM E-Value=0.71) 28 5.6
SB_21213| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_31088| Best HMM Match : CAP_GLY (HMM E-Value=2.2e-37) 28 7.4
SB_25250| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_19040| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_3125| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07) 28 7.4
SB_16518| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_14258| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_26678| Best HMM Match : I-set (HMM E-Value=1e-07) 27 9.7
SB_20705| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
>SB_32676| Best HMM Match : adh_short (HMM E-Value=1.2e-05)
Length = 201
Score = 73.3 bits (172), Expect = 1e-13
Identities = 47/147 (31%), Positives = 75/147 (51%), Gaps = 7/147 (4%)
Frame = +2
Query: 11 VVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYG-NKTKFYRSDV 187
V +TG GIG ++ + LLD K + +LDI E+ G L+ Y ++ F + DV
Sbjct: 7 VAIVTGGVQGIGLAISKALLDRDGK-VCMLDINEKTGNETLKLLSENYSKHRVLFIKCDV 65
Query: 188 TNEEHFLGILNAVVQEQGGIDVVINNAALM---NDSI--GIYKKAIEVNVTALITSTLKA 352
T++ G +D++ NNA + ND + G +K I++NV +I TL
Sbjct: 66 TSQPQMEAAFQRTKDVFGRLDILCNNAGIAVRENDLLRSGAWKTIIDINVKGVILGTLLG 125
Query: 353 IEIMGKHSG-GKGGTVINVSSVAALTQ 430
++ MG G GGT++NV+S+A Q
Sbjct: 126 LDHMGVSGAKGHGGTIVNVASLAESIQ 152
>SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34)
Length = 253
Score = 69.7 bits (163), Expect = 2e-12
Identities = 52/196 (26%), Positives = 94/196 (47%), Gaps = 8/196 (4%)
Frame = +2
Query: 5 DKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNKTKFYRSD 184
+KV+ ITGA+ GIG + R+ +G + A ++L E+ ++ G + ++D
Sbjct: 7 EKVMLITGASRGIGAATARLAAAQGYALCLNYQRQQAAAEALVSEI-TQAGGRAIAVQAD 65
Query: 185 VTNEEHFLGILNAVVQEQGGIDVVINNAALMNDSIGI-------YKKAIEVNVTALITST 343
V +E + + + Q G +DV++NNA ++ + + +++ NV
Sbjct: 66 VADERQVMQLFARLDQHFGRLDVLVNNAGILETQMRLEQMELARWQRVFATNVFGSFLCC 125
Query: 344 LKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPI-YFATKSAVLQFSNCVGRPEHFSKT 520
+AI+ M GG GG ++N+SS AA + I Y A K A+ S +G + +
Sbjct: 126 REAIKRMSTRQGGNGGAIVNLSSAAARLGAPGEYIDYAAVKGAI--DSMTLGLAKEVAAD 183
Query: 521 GVRVLTVCFGATDTAL 568
G+RV V G +T +
Sbjct: 184 GIRVNAVRPGVIETEI 199
>SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32)
Length = 728
Score = 69.3 bits (162), Expect = 2e-12
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 7/202 (3%)
Frame = +2
Query: 2 KDKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNKTKFYRS 181
+ + V ITGAA+GIG IL +G K + + DI EA K++ E+ G +T ++
Sbjct: 34 RGETVLITGAASGIGRLTALILAKKGCK-LVLWDINLEALKAVAQEIQD-LGAETHYFEC 91
Query: 182 DVTNEEHFLGILNAVVQEQGGIDVVINNAAL------MNDSIGIYKKAIEVNVTALITST 343
DV ++ + NAV + G + ++INNA + +N S + +VN A I +
Sbjct: 92 DVRKKDEVEKVANAVEDQAGNVTILINNAGVVTGKKFLNCSESDVMRTFQVNSLAHIWTI 151
Query: 344 LKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCVGRPEH-FSKT 520
+ I M + + G +++++SVA Y A+K A + + R H K
Sbjct: 152 QRFIPSMMEKNRGH---IVSIASVAGYFGLVGCVDYCASKFAAVGLIEALRREIHGLGKM 208
Query: 521 GVRVLTVCFGATDTALLTDEKL 586
G+ T+C T T + KL
Sbjct: 209 GIEFTTICPHFTATGMFAGVKL 230
>SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 68.9 bits (161), Expect = 3e-12
Identities = 35/89 (39%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Frame = +2
Query: 8 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNKTKFYRSDV 187
+V +TG A+GIG++ V L EG +AILDI +E G+ ++ +L S GNK KFY DV
Sbjct: 25 RVAIVTGGASGIGKATVERLAREGAS-VAILDINDELGQQVETDLRSS-GNKVKFYHVDV 82
Query: 188 TNEEHFLGILNAVVQEQG-GIDVVINNAA 271
N++ ++ V + G + +++NNAA
Sbjct: 83 ANKDMCAHVVGCVAADHGSAVHILVNNAA 111
>SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34)
Length = 527
Score = 60.5 bits (140), Expect = 1e-09
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 7/162 (4%)
Frame = +2
Query: 8 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGK--SLQVELNSKYGNKTKFYRS 181
KV ITG ++GIG + IL +G K + K SL+ + G+
Sbjct: 4 KVAVITGCSSGIGLATASILAKDGEKRFRVYATMRNLDKKGSLESACQNALGDTLFIREL 63
Query: 182 DVTNEEHFLGILNAVVQEQGGIDVVINNAALMNDSIGIYKKAIEVNVTALITSTLKAIEI 361
DV++++ LNA+ +E+G ID+++NNA + + IG+ + + V + +
Sbjct: 64 DVSSDDSVEEALNAIYEEEGRIDILVNNAGISH--IGMLETQTQSLVKETFNTNFFGVLR 121
Query: 362 MGK-----HSGGKGGTVINVSSVAALTQSHVMPIYFATKSAV 472
M K G +IN+SS A T +Y A+K AV
Sbjct: 122 MSKAVIPRMKSDHSGHIINISSTAGHTGMPFTGLYCASKFAV 163
>SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 55.2 bits (127), Expect = 4e-08
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 8/163 (4%)
Frame = +2
Query: 8 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGK--SLQVELNSKYGNKTKFYRS 181
+VV +TG ++GIG ++ +L + K + GK +L + + +
Sbjct: 35 RVVVVTGCSSGIGLALAVLLSHDADKRFKVYATMRNLGKKDALLEKCSGVVEDLLNIKEL 94
Query: 182 DVTNEEHFLGILNAVVQEQGGIDVVINNAAL------MNDSIGIYKKAIEVNVTALITST 343
DV ++E ++ +V+++G IDV++NNA + + K E NV L+ T
Sbjct: 95 DVCSDESVKAVVAEIVEKEGRIDVLVNNAGIGLFCVPECATTDAINKVFEPNVYGLMRMT 154
Query: 344 LKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAV 472
I M K + G V+N+ SV + + IY A+K AV
Sbjct: 155 NAVIPHMKKQ---RAGHVVNIGSVLGIVGTPFSEIYCASKFAV 194
>SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11)
Length = 305
Score = 53.6 bits (123), Expect = 1e-07
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 18/198 (9%)
Frame = +2
Query: 5 DKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNKTKFYRSD 184
D++V ITGA +GIG+ + G K I +DI ++A VE+ K Y+ D
Sbjct: 53 DEIVLITGAGSGIGKGMAIEFAKIGAK-IVCVDINKQANDQ-TVEVIKSLNQKAFGYKCD 110
Query: 185 VTNEEHFLGILNAVVQEQGGIDVVINNAAL------MNDSIGIYKKAIEVNVTA------ 328
++ E + + V +E G + +++NNA + ++ + +K +EVN A
Sbjct: 111 CSSREDIYRVADIVKREVGEVTILVNNAGIVSGKKFLDTEDWMIQKTMEVNTMAHFWILA 170
Query: 329 ----LITSTLKAIE-IMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCV 493
I TL+ ++ + G V+N++S A M Y ++K + F +
Sbjct: 171 LNPDYIVFTLQTVKSFLPSMLAKNHGHVVNIASSAGFFGVPGMCDYCSSKFGAVGFDESL 230
Query: 494 GRP-EHFSKTGVRVLTVC 544
KTGV+ VC
Sbjct: 231 RMELSSLGKTGVKTTVVC 248
>SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15)
Length = 355
Score = 53.2 bits (122), Expect = 2e-07
Identities = 53/199 (26%), Positives = 89/199 (44%), Gaps = 12/199 (6%)
Frame = +2
Query: 8 KVVFITGAATGIGESVVRILLDEGVKHI------AILDIAEEAGKSLQVELNSKYGNKTK 169
+V +ITGA++GIGE++ L G K + + L+ +E ++ E N+ Y
Sbjct: 43 RVCWITGASSGIGENLAYELAKFGCKLVLSARRRSELERVKEQCIAIAKEANTSYNADQD 102
Query: 170 FY--RSDVTNEEHFLGILNAVVQEQGGIDVVINNAALMNDSIGIYKKAIEVNVTALITST 343
DVT + ++ +V+ ID++INN+ + + IEV L +
Sbjct: 103 ILVLPMDVTEYDKHTELVRSVLDHFNKIDILINNSGRSQRGLAVETPGIEVEKAMLDLNF 162
Query: 344 LKAIE----IMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCVGRPEHF 511
L + ++ K G ++ SSVA + + Y ATK AV + + + R E F
Sbjct: 163 LAVVSLTKAVLPHMIERKNGHIVVTSSVAGKIGAPMSTSYNATKFAVQGYFDGL-RVELF 221
Query: 512 SKTGVRVLTVCFGATDTAL 568
K + V VC G TA+
Sbjct: 222 PK-NIHVTLVCPGPVRTAI 239
>SB_26063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 53.2 bits (122), Expect = 2e-07
Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Frame = +2
Query: 11 VVFITGAATGIGESVVRILL-DEG--VKHIAILDIAEEAGKSLQVELNSKYGNKTKFYRS 181
+V ITG +TGIG + +L D+G K A + E+ G L+ + G+ +
Sbjct: 198 IVLITGCSTGIGLAAALLLAKDDGRRFKVYATMRNLEKRG-ILEEAARRQLGDTLIVKQL 256
Query: 182 DVTNEEHFLGILNAVVQEQGGIDVVINNA------ALMNDSIGIYKKAIEVNVTALITST 343
DVT++E +L ++ + IDV++NNA L ++ + ++ VN ++ T
Sbjct: 257 DVTSDESVTEVLQSIYSAERRIDVLVNNAGVGLIGVLETHTMSLVREMFNVNFFGVVRLT 316
Query: 344 LKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAV 472
KA ++ K G G +IN+ S+ + IY ++K AV
Sbjct: 317 -KA--VIPKMKGNPSGHIINIPSIGGIRGVPFNAIYCSSKFAV 356
>SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 50.8 bits (116), Expect = 9e-07
Identities = 59/197 (29%), Positives = 95/197 (48%), Gaps = 7/197 (3%)
Frame = +2
Query: 2 KDKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNKTKFYRS 181
K+KVV ++ AA GIG++ EG K IA DI E K EL+S G +T+
Sbjct: 15 KNKVVVLSAAAQGIGKATALACAREGAKVIA-TDINAEKLK----ELHSVPGIETRVV-- 67
Query: 182 DVTNEEHFLGILNAVVQEQGGIDVVINNAALM------NDSIGIYKKAIEVNVTALITST 343
DVT+ E + E +DV+ N A L+ S + +++NV ++ T
Sbjct: 68 DVTDYE----AIKKFASEVDRVDVLFNCAGLVLGGNIEECSEKQWDLTMDLNVKSMFRMT 123
Query: 344 LKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFAT-KSAVLQFSNCVGRPEHFSKT 520
+ I M + G++IN++SVA+ + + T K+AV+ F+ + ++ +K
Sbjct: 124 KECIPKMRQQG---SGSIINMASVASSIKGAPNRFAYGTSKAAVIGFTKAIA-ADYITK- 178
Query: 521 GVRVLTVCFGATDTALL 571
G+RV VC G T L
Sbjct: 179 GIRVNAVCPGTIYTESL 195
>SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15)
Length = 537
Score = 50.4 bits (115), Expect = 1e-06
Identities = 46/200 (23%), Positives = 88/200 (44%), Gaps = 14/200 (7%)
Frame = +2
Query: 11 VVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNKTKFYRSDVT 190
V I G A+GIG + L+ G + + I+D+ G++ E +G+ F V
Sbjct: 290 VALIAGGASGIGRATAIRLIRAGARAV-IVDLPSSEGQNTAQE----FGSHCTFIPGHVD 344
Query: 191 NEEHFLGILNAVVQEQGGIDVVINNAAL------MNDS-----IGIYKKAIEVNVTALIT 337
+E + ++ G ++ IN AAL +++S + ++++ +++N
Sbjct: 345 SESEIKAAIKVAKEKYGCVNASINTAALNTKELTLSESGCPHPLELFEETMKINAVGTFN 404
Query: 338 STLKAIEIMGKHSG---GKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCVGRPEH 508
E M ++ G+ G ++NVSS+ Y ATK A+ + + R
Sbjct: 405 VARLVAESMATNTPDQEGERGVIVNVSSIHGTEGQSGKVAYAATKGAINAMTLPMAR--D 462
Query: 509 FSKTGVRVLTVCFGATDTAL 568
+K G+RV T+ G +T +
Sbjct: 463 LAKLGIRVNTISPGIFNTPM 482
>SB_28806| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 614
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/86 (27%), Positives = 50/86 (58%)
Frame = +2
Query: 20 ITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNKTKFYRSDVTNEE 199
+TG GIG VV+ L+ + +I + ++E G++ LN G + ++++ DVT+ +
Sbjct: 28 VTGGNRGIGYCVVQQLVQQFDGNIILTARSDEQGEAACRSLN--VGGRVEYHKLDVTSND 85
Query: 200 HFLGILNAVVQEQGGIDVVINNAALM 277
+ V ++ GG+D+++NNA ++
Sbjct: 86 SIHELTLHVQEKYGGLDILVNNAGIL 111
>SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23)
Length = 228
Score = 46.4 bits (105), Expect = 2e-05
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Frame = +2
Query: 8 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKY---GNKTKFYR 178
K+V ITG +TG+G ++ + +G H ++ A K E+N KY G +FY
Sbjct: 3 KIVAITGVSTGLGLALTKWFSSQG--H-TVVGCGRSAAKI--AEMNEKYCGKGKPNQFYV 57
Query: 179 SDVTNEEHFLGILNAVVQEQGGIDVVINNAALMNDSIGIYK-------KAIEVNVTALIT 337
D+T++ V + G D V+NNA +N + +++ K ++VN+
Sbjct: 58 VDITDDSVVKEWATNVCKSFGPPDFVLNNAGFVNQNAPLWEITAEEFDKVVDVNLKGSAN 117
Query: 338 STLKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATK 463
+ M K GK G ++N SS M Y ATK
Sbjct: 118 VIRSFLPKMIK--AGK-GVIVNFSSGYGKAGKAKMAPYCATK 156
>SB_8042| Best HMM Match : DUF803 (HMM E-Value=0)
Length = 603
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/90 (28%), Positives = 50/90 (55%)
Frame = +2
Query: 8 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNKTKFYRSDV 187
+V +TGA++GIG +V + L + GVK +A+ EE L+ E+ + G+ ++DV
Sbjct: 105 QVAIVTGASSGIGAAVAKALAEAGVK-VALAARREERLTQLRDEIIAN-GDVAISVKTDV 162
Query: 188 TNEEHFLGILNAVVQEQGGIDVVINNAALM 277
T +E ++ G +D++++ A +M
Sbjct: 163 TIKEQMESLVKRTDSTLGPVDILVSCAGVM 192
>SB_38785| Best HMM Match : adh_short (HMM E-Value=2.4e-06)
Length = 267
Score = 43.2 bits (97), Expect = 2e-04
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Frame = +2
Query: 185 VTNEEHFLGILNAVVQEQG-GIDVVINNAALMNDSIGIYKKAIEVNVTALITSTLKAIEI 361
V NE+ G LNA V G GI V + ++ +++K ++VN T E
Sbjct: 84 VANEK--FGPLNAAVNCAGIGIAVKTLSKTGEAHALDLFEKVLKVNTTGSFNVIRLVAEQ 141
Query: 362 MGKHS---GGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCVGRPEHFSKTGVRV 532
M K+ GG+ G + N +SVAA Y A+K ++ + + R ++ G+RV
Sbjct: 142 MIKNEPTEGGERGVITNTASVAAFDGQMGQAAYSASKGGIVGMTLPIAR--DLARNGIRV 199
Query: 533 LTVCFGATDTALL 571
T+ G T LL
Sbjct: 200 NTIAPGLFLTPLL 212
>SB_27289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 42.3 bits (95), Expect = 3e-04
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 6/121 (4%)
Frame = +2
Query: 242 GIDVVINNAALMNDS------IGIYKKAIEVNVTALITSTLKAIEIMGKHSGGKGGTVIN 403
G+ V NNA M + + YK+ +VN+ L+ T + ++ K + G+ V+N
Sbjct: 20 GLWAVYNNAGFMTLAPLEWFPLDDYKRMADVNLWGLVDVTKTFLPLV-KMARGR---VVN 75
Query: 404 VSSVAALTQSHVMPIYFATKSAVLQFSNCVGRPEHFSKTGVRVLTVCFGATDTALLTDEK 583
VSS+A + M Y TK V FS+ + R S GVRV+ + G T L ++K
Sbjct: 76 VSSIAGIVVVPSMAAYSITKYGVEAFSDALRR--EMSPWGVRVIIIEPGGFKTPLWDEQK 133
Query: 584 L 586
+
Sbjct: 134 I 134
>SB_5928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 609
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/79 (25%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +2
Query: 89 IAILDIAEEAGKSLQVELNSKYGN-KTKFYRSDVTNEEHFLGILNAVVQEQGGIDVVINN 265
+ ++D+ ++AG + L +K+G+ F DV+N++ V G +D+V NN
Sbjct: 24 VVLVDLQKKAGNDVTCLLQNKHGSGSVSFISCDVSNQDQLKDAFWETVSTHGHLDIVFNN 83
Query: 266 AALMNDSIGIYKKAIEVNV 322
A ++++ + K ++VN+
Sbjct: 84 AGILDEE--RWSKTLDVNL 100
>SB_5208| Best HMM Match : adh_short (HMM E-Value=1.1e-05)
Length = 233
Score = 40.7 bits (91), Expect = 0.001
Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 6/131 (4%)
Frame = +2
Query: 5 DKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNKTKFYRSD 184
DK V ITG+++G+G I LD+ H+ + SL+++ + +
Sbjct: 41 DKFVLITGSSSGMGRETA-IALDKLGFHVLATCRTRKGEDSLRLDCSERMRTYVMDVSDT 99
Query: 185 VTNEEHFLGILNAVVQEQGGIDVVINNAALMN------DSIGIYKKAIEVNVTALITSTL 346
V+ + IL + EQ G+ ++NNA ++ S+ K+ +VN+ LI T
Sbjct: 100 VSVRSVYQQILQLLESEQQGLWGLVNNAGILQVGPLDWQSLDSIKQTADVNLWGLIDVTK 159
Query: 347 KAIEIMGKHSG 379
+ ++ K G
Sbjct: 160 TFLPLLKKAKG 170
>SB_12716| Best HMM Match : E3_binding (HMM E-Value=9.7)
Length = 133
Score = 40.3 bits (90), Expect = 0.001
Identities = 35/105 (33%), Positives = 49/105 (46%)
Frame = +2
Query: 296 YKKAIEVNVTALITSTLKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVL 475
YKK +VN+ LI TL + ++ K GG V+N+SS+A Y TK V
Sbjct: 13 YKKMADVNLWGLIDVTLTFLPLIRK----CGGRVVNISSIAGRLSIPNTGPYSVTKYGVE 68
Query: 476 QFSNCVGRPEHFSKTGVRVLTVCFGATDTALLTDEKLGTFDKYLE 610
FS+ + R S GV+V V G T L + G +K L+
Sbjct: 69 AFSDALRR--EVSPWGVKVTLVEPGGFHTRFLAE---GALEKKLQ 108
>SB_21622| Best HMM Match : adh_short (HMM E-Value=3.1e-05)
Length = 493
Score = 39.5 bits (88), Expect = 0.002
Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 3/134 (2%)
Frame = +2
Query: 20 ITGAATGIGESVVRILLDEGVK-HIAILDIAEEAGKSLQVELNSKYGNKTKF-YRSDVTN 193
ITGA +GIG+ R L G H+ D E+ G+ + EL + GN+ + + D++
Sbjct: 48 ITGANSGIGKETARALAKSGATVHMVCRD--EQRGEQARQELLQESGNQNIYLHVLDMSQ 105
Query: 194 EEHFLGILNAVVQEQGGIDVVINNAALMNDSIGIYKKAIEVN-VTALITSTLKAIEIMGK 370
+ + V++NNA M ++ I + +E+N T + + + E++
Sbjct: 106 PSNVCKFARDFAASNRPLHVLVNNAGCMVNTRTITEDGLEMNFATNTLGTYILTKELLPC 165
Query: 371 HSGGKGGTVINVSS 412
+ + VI VSS
Sbjct: 166 LTSQESPRVITVSS 179
>SB_35940| Best HMM Match : adh_short (HMM E-Value=0.00021)
Length = 181
Score = 39.5 bits (88), Expect = 0.002
Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 3/134 (2%)
Frame = +2
Query: 20 ITGAATGIGESVVRILLDEGVK-HIAILDIAEEAGKSLQVELNSKYGNKTKF-YRSDVTN 193
ITGA +GIG+ R L G H+ D E+ G+ + EL + GN+ + + D++
Sbjct: 48 ITGANSGIGKETARALAKSGATVHMVCRD--EQRGEQARQELLQESGNQNIYLHVLDMSQ 105
Query: 194 EEHFLGILNAVVQEQGGIDVVINNAALMNDSIGIYKKAIEVN-VTALITSTLKAIEIMGK 370
+ + V++NNA M ++ I + +E+N T + + + E++
Sbjct: 106 PSNVCKFARDFAASNRPLHVLVNNAGCMVNTRTITEDGLEMNFATNTLGTYILTKELLPC 165
Query: 371 HSGGKGGTVINVSS 412
+ + VI VSS
Sbjct: 166 LTSQESPRVITVSS 179
>SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10)
Length = 289
Score = 39.5 bits (88), Expect = 0.002
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 7/128 (5%)
Frame = +2
Query: 110 EEAGKSLQVELNSKYGNKTKFYRSDVTNEEHFLGILNAVVQEQGGIDVVINNAALMND-- 283
EE K E+ S +G + + + D+ N L ++Q G IDV++NNA M
Sbjct: 73 EEGAKDTAREVVS-HGVRAEIVQLDLGNLPEGALALEKLIQRLGRIDVLVNNAGAMTKAP 131
Query: 284 ----SIGIYKKAIEVNVT-ALITSTLKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPI 448
+ ++K V+V A + S + A +++ + G+GG +IN++SV T
Sbjct: 132 FLDMAFDEWRKIFTVDVDGAFLCSQIAARQMVKQ---GQGGRIINITSVHEHTPLPDASA 188
Query: 449 YFATKSAV 472
Y A K A+
Sbjct: 189 YTAAKHAL 196
>SB_50727| Best HMM Match : adh_short (HMM E-Value=8.9e-08)
Length = 272
Score = 38.3 bits (85), Expect = 0.005
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Frame = +2
Query: 11 VVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNKTKFYRSDV- 187
V +TGAA +G +VR L G + + + + E + + E+NS + ++D+
Sbjct: 14 VALVTGAAKRLGAGIVRALHGSGFRVVIHYNNSGEDAEKIVQEMNSVRSDSAIMLKADLS 73
Query: 188 TN-EEHFLGILNAVVQEQGGIDVVINNAA 271
TN +E ++ V G +D+++NNA+
Sbjct: 74 TNIQETARKLIEDTVTAFGQLDLLVNNAS 102
>SB_6722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 36.3 bits (80), Expect = 0.021
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Frame = +2
Query: 2 KDKVVFITGAATGIGESVVRILLDEGVKHI-AILDIAEEAGKSLQVELNSKYGN-KTKFY 175
K K V ITGA +GIG V R L + I A D+ G E+ GN +
Sbjct: 71 KGKTVIITGANSGIGMEVARDLAWRKARVIMACRDV--HKGMKAAAEIVQSAGNMDVEVK 128
Query: 176 RSDVTNEEHFLGILNAVVQEQGGIDVVINNAALMNDSIGIYKKAIE 313
+ D+ + V +E+ +DV+INNA +G KK ++
Sbjct: 129 KLDLASFASIREFAKEVNEEESRVDVLINNAGY----LGSQKKTVD 170
>SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33)
Length = 717
Score = 35.9 bits (79), Expect = 0.028
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 9/101 (8%)
Frame = +2
Query: 8 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEA---GKSLQV------ELNSKYGN 160
+VV +TGA G+G + G + + D+ + GKS + E+ +K G
Sbjct: 11 RVVLVTGAGNGLGRQYALAFAERGAS-VVVNDLGGDTKGEGKSGRAADKVVQEIRAKGGK 69
Query: 161 KTKFYRSDVTNEEHFLGILNAVVQEQGGIDVVINNAALMND 283
Y S ++ ++ ++ G IDVV+NNA ++ D
Sbjct: 70 AVADYNSVEQGDQ----VVETAIKAFGRIDVVVNNAGILRD 106
>SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45)
Length = 620
Score = 35.9 bits (79), Expect = 0.028
Identities = 26/125 (20%), Positives = 61/125 (48%), Gaps = 3/125 (2%)
Frame = +2
Query: 2 KDKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNKTK--FY 175
+ ++ +TG +GIG +V L + G ++++D+ K L + + + T+ +
Sbjct: 192 RGRLALVTGGGSGIGRAVCEALANRGAS-VSVIDLHGVGAKETSENL-ATHNDTTRHTHF 249
Query: 176 RSDVTNEEHFLGILNAVVQE-QGGIDVVINNAALMNDSIGIYKKAIEVNVTALITSTLKA 352
+V + +L A+ +E Q +++N+A + D++ + K E + +I LK
Sbjct: 250 AVNVASSSEVKDLLQAIHKEYQRAPCILVNSAGIAKDALLLKMK--EQDFDDVIDVNLKH 307
Query: 353 IEIMG 367
+ ++G
Sbjct: 308 VRVIG 312
>SB_9398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 35.1 bits (77), Expect = 0.049
Identities = 27/130 (20%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Frame = +2
Query: 8 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGK--SLQVELNSKYGNKTKFYRS 181
+VV +TG ++GIG ++ +L + K + K +L + + G+
Sbjct: 37 RVVLVTGCSSGIGLALAVLLSHDADKRFKVYATMRNLVKKDALLEKCSGVVGDLLNIKEL 96
Query: 182 DVTNEEHFLGILNAVVQEQGGIDVV---INNAALMNDSIGIYK--KAIEVNVTALITSTL 346
DV ++E ++ +V+++G IDV+ + + ND I K + + + +
Sbjct: 97 DVCSDESVKAVVAEIVEKEGRIDVLGRHLKTPSTSNDVISALKLDQGRHLKTPSTSNDVI 156
Query: 347 KAIEI-MGKH 373
A+++ +G+H
Sbjct: 157 SALKLDLGRH 166
>SB_13156| Best HMM Match : adh_short (HMM E-Value=0.00022)
Length = 233
Score = 34.7 bits (76), Expect = 0.064
Identities = 30/96 (31%), Positives = 44/96 (45%)
Frame = +2
Query: 296 YKKAIEVNVTALITSTLKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVL 475
YK+ EVN+ + T + ++ + G V+N+SSVA + Y +K V
Sbjct: 61 YKQIAEVNLWGTVRMTKAFLPLLKREKG----RVVNISSVAGMVPLQRSSAYCISKFGVS 116
Query: 476 QFSNCVGRPEHFSKTGVRVLTVCFGATDTALLTDEK 583
FS+ + R S GV V+ V GA T TD K
Sbjct: 117 VFSDALRR--EMSPWGVGVVLVEPGAFKTQ-ATDPK 149
>SB_44870| Best HMM Match : adh_short (HMM E-Value=5.4e-11)
Length = 236
Score = 33.9 bits (74), Expect = 0.11
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Frame = +2
Query: 8 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGN-KTKFYRSD 184
+VV ITG + G+G ++V+ G H ++ A K ++ G K +FY D
Sbjct: 8 EVVVITGVSYGLGLAMVKWFNANG--H-TVIGCARSHDKIEKINEEFASGKEKRQFYVVD 64
Query: 185 VTNEEHFLGILNAVVQEQGGIDVVINNAALMNDSIGIYKKAIE 313
++N+E V+ + G ++INN+ + N + ++ E
Sbjct: 65 ISNDEAVKQWSQQVMLDFGAPSLLINNSGVTNKNANFWEVPTE 107
>SB_40186| Best HMM Match : Extensin_2 (HMM E-Value=0.0036)
Length = 362
Score = 33.9 bits (74), Expect = 0.11
Identities = 32/132 (24%), Positives = 54/132 (40%), Gaps = 1/132 (0%)
Frame = -3
Query: 402 LITVPPLPPLCFPIISMAFNVLVIKAVTLTSMAFL*MPILSFMRAALLITTSMPPCS*TT 223
++T PLPP P ++ +L++ LTS +P L+ L++TTS P
Sbjct: 8 MVTTSPLPPPTIPFLAATTPLLMVTTSPLTSPT---IPFLATTTPLLMVTTSPLPSPTIP 64
Query: 222 ALRIPRKCSSLVTSDL*NFVLLPYFEFSSTCNDFPASSAMSKIAICLTPSSNNILTTDSP 43
L + TS L +P+ ++ S S L ++ ++ T SP
Sbjct: 65 FLATTTPLLMVTTSTL-PPPTIPFLATTTPLLMVTTSPLPSPTIPFLATTTPLLMVTTSP 123
Query: 42 MP-VAAPVIKTT 10
+P P + TT
Sbjct: 124 LPSPTIPFLATT 135
>SB_33638| Best HMM Match : adh_short (HMM E-Value=0.0014)
Length = 268
Score = 32.7 bits (71), Expect = 0.26
Identities = 25/111 (22%), Positives = 47/111 (42%), Gaps = 2/111 (1%)
Frame = +2
Query: 5 DKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNKTKFYRSD 184
++ +TG GIG ++ L G I + +E + + EL SKY + + D
Sbjct: 81 NRYALVTGGTRGIGLAISHKLAKNGYYLILGYNANDERAEKAKSELESKYNVRVFTVKGD 140
Query: 185 VTNEEHFLGILNAV-VQEQGGIDVVINNAALMNDSIGIYKKAI-EVNVTAL 331
V + ++ ++ ++NA L +G+ A E ++TAL
Sbjct: 141 VAEDSTINAFFESIKANFDNKLNAFVHNAGL---QVGLTTDATSEASITAL 188
>SB_52724| Best HMM Match : adh_short (HMM E-Value=5.1e-08)
Length = 316
Score = 32.3 bits (70), Expect = 0.34
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = +2
Query: 8 KVVFITGAATGIGESVVRILLDEGVKHI---AILDIAEEAGKSLQVELNSKYGNKTKFYR 178
K V ITGA TGIG+ L G + I LD A + +Q S+
Sbjct: 38 KTVIITGATTGIGKETAVDLAKRGARVIIGARNLDRGNAAVRDIQASSGSQQVFVEHLDL 97
Query: 179 SDVTNEEHFLGILNAVVQEQGGIDVVINNAAL 274
+ +++ F ++N +++ +D+++NNA +
Sbjct: 98 ASLSSVRKFAEVIN---KKEERVDILMNNAGV 126
>SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39)
Length = 1750
Score = 32.3 bits (70), Expect = 0.34
Identities = 28/122 (22%), Positives = 54/122 (44%), Gaps = 7/122 (5%)
Frame = +2
Query: 197 EHFLGILNAVVQEQGGIDVVINNAA------LMNDSIGIYKKAIEVNVTALITSTLKAIE 358
E + V E G +D+++NNA L++ + +KAIE+N+ A ++
Sbjct: 1284 EEIYATASRVKGEVGDVDILVNNAGILHGKRLLDQTDAQIQKAIELNLLAHFWTSR---S 1340
Query: 359 IMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCVGRPEH-FSKTGVRVL 535
+G+ G ++ +SSV+ + Y A+K + F + + + K GV+
Sbjct: 1341 FLGRMLEQNQGHIVTISSVSGSFPTAFQVEYCASKYGAVGFHDALSHELYTLGKDGVKTT 1400
Query: 536 TV 541
V
Sbjct: 1401 LV 1402
>SB_27292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 31.9 bits (69), Expect = 0.45
Identities = 25/79 (31%), Positives = 40/79 (50%)
Frame = +2
Query: 296 YKKAIEVNVTALITSTLKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVL 475
YK+ +VN+ L+ T + ++ K + G+ V+NVSS+ L + + Y TK V
Sbjct: 14 YKRMADVNLWGLVDVTKTFLPLV-KMARGR---VVNVSSIVGLIANELTAPYSITKYGVE 69
Query: 476 QFSNCVGRPEHFSKTGVRV 532
FS+ + R GVRV
Sbjct: 70 AFSDVLRR--EMLPWGVRV 86
>SB_47084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 355
Score = 31.1 bits (67), Expect = 0.79
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +2
Query: 8 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNKTKFYR-SD 184
K V +TGA +GIG++ L G + I E A K+ E+ K R D
Sbjct: 69 KTVIVTGANSGIGKATALELARRGARVIMACRDLESAEKAAS-EIRYKVPKAEVVCRFLD 127
Query: 185 VTNEEHFLGILNAVVQEQGGIDVVINNAAL 274
+ + V++E+ +D+++NNA +
Sbjct: 128 LNSLISVRKFAEDVMREEKRLDILVNNAGV 157
>SB_14553| Best HMM Match : adh_short (HMM E-Value=4.2e-08)
Length = 319
Score = 30.7 bits (66), Expect = 1.0
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +2
Query: 8 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNKTKFYRS-D 184
K V ITGA TGIG+ L G + + I + G + ++ S+ G++ F D
Sbjct: 38 KTVIITGATTGIGKETAVDLAKRGAR-VIIGARNLDRGNTAVRDIQSRSGSQQVFVEHLD 96
Query: 185 VTNEEHFLGILNAVVQEQGGIDVVINNAAL 274
+ + + ++ I ++INNA +
Sbjct: 97 LASLSSVRKFAEVMNNKEERIHILINNAGV 126
>SB_45640| Best HMM Match : Epimerase (HMM E-Value=9.4e-38)
Length = 451
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 14 VFITGAATGIGESVVRILLDEGVK 85
V +TG A +G S+V ILLD+G K
Sbjct: 143 VLVTGGAGYLGSSLVPILLDQGYK 166
>SB_41907| Best HMM Match : Reprolysin (HMM E-Value=9.2e-05)
Length = 656
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 245 IDVVINNAALMNDSIGIYKKAIEVNVTALITSTLKAIEIM 364
ID++IN L+N S+ K AI + T+ ST I I+
Sbjct: 427 IDIIINTFILINSSVSSSKTAISSSTTSPPLSTFPIITII 466
>SB_7777| Best HMM Match : adh_short (HMM E-Value=0.083)
Length = 133
Score = 29.1 bits (62), Expect = 3.2
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Frame = +2
Query: 215 LNAVVQEQGGIDVVINNA--ALMNDSIGI----YKKAIEVNVTA-LITSTLKAIEIMGKH 373
+ +++ Q D+++NNA A+ + I + + E NV A L + A +++ K
Sbjct: 17 MQKLIESQETFDLLVNNAGFAIFESFLEIKPESFDRMHETNVRAPLFIAQAVAKKMVAK- 75
Query: 374 SGGKGGTVINVSSVAALTQSHV 439
G+GG ++NVSSV T+ H+
Sbjct: 76 --GEGGAIVNVSSV--FTELHL 93
>SB_25711| Best HMM Match : Oxidored_q1_N (HMM E-Value=3)
Length = 166
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 245 IDVVINNAALMNDSIGIYKKAIEVNVTALITSTLKAIEIM 364
ID++IN L+N S+ K AI + T+ ST I I+
Sbjct: 113 IDIIINTFILINSSVSSSKTAISSSTTSPPLSTFPIITII 152
>SB_53258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 811
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 487 VTELQHSAFSGEVYRHYVRLRQSGNRRYV 401
+ L H S E+ HY + RQ+GN YV
Sbjct: 619 IVALNHQTNSEEMQLHYGKFRQNGNTGYV 647
>SB_22927| Best HMM Match : SerH (HMM E-Value=1.1)
Length = 678
Score = 28.7 bits (61), Expect = 4.2
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 10/97 (10%)
Frame = +2
Query: 173 YRSDVTNE-EHFLGILNAVVQEQGGIDVV---------INNAALMNDSIGIYKKAIEVNV 322
Y++ VT+E H +V Q G + + NN + + S+G+Y + +V
Sbjct: 177 YKNGVTSEPSHLCAKATSVTQPIGSVGIEPNQTTRSSSTNNGVMSSASVGVYSSREKTDV 236
Query: 323 TALITSTLKAIEIMGKHSGGKGGTVINVSSVAALTQS 433
TA +T+ A+ HS N SSV ++TQS
Sbjct: 237 TAYVTTYTPAL-----HSSLL--MKANPSSVTSVTQS 266
>SB_34916| Best HMM Match : adh_short (HMM E-Value=4.8e-06)
Length = 251
Score = 28.7 bits (61), Expect = 4.2
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = +2
Query: 14 VFITGAATGIGESVVR--ILLDEGVKH-IAILDIAEEAGKSLQVELNSKYGNKTKFYRSD 184
VFITG + GIG V+ + L + KH IA +EA + ++ L + ++ D
Sbjct: 9 VFITGCSRGIGLEFVKQFVCLAKPPKHIIATSRKIDEASELYKLGL---IHDNLHVFQLD 65
Query: 185 VTNEEHFLGILNAV--VQEQGGIDVVINNAAL 274
VT+ E + + G+ ++INNA L
Sbjct: 66 VTSPESIREATEKATSILQGSGLSLLINNAGL 97
>SB_24597| Best HMM Match : RNA_pol_delta (HMM E-Value=0.71)
Length = 1139
Score = 28.3 bits (60), Expect = 5.6
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Frame = +2
Query: 215 LNAVVQEQGGID----VVINNAALMNDSIGIYKKAIEVNVTALITSTLKAIEIMGKHSGG 382
+ A+ QG + V NNA + ++ A+E L T T K+ + + +G
Sbjct: 254 IEAICSGQGALSSLHSVQENNATSTDKTVTSKNTAVEKKRKTLTTQTDKSCKFLKNANGE 313
Query: 383 KGGTVINVSSVAALTQSHVMPI 448
K NVS+ LT V I
Sbjct: 314 KSSCTENVSANEVLTTQKVKEI 335
>SB_21213| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 28.3 bits (60), Expect = 5.6
Identities = 32/142 (22%), Positives = 63/142 (44%), Gaps = 9/142 (6%)
Frame = +2
Query: 185 VTNEEHFLGILNAVVQEQGGIDVVIN-NAALMNDSIGIYKKAIEVN-VTALITSTLKA-- 352
V N HF A V+ G + + + AL + ++K ++V ++ L+TS +
Sbjct: 53 VPNNAHF-DTTRANVEAVGAVAINLPVPEALDPQHVSLFKGNMDVQKLSKLLTSEKRKKV 111
Query: 353 ----IEIMGKHSGGKGGTVINVSSVAALTQSHVMPIYF-ATKSAVLQFSNCVGRPEHFSK 517
I I GG ++ N+ +V+ L ++H +P+YF A + A + + +K
Sbjct: 112 KMVIITITNNALGGSPVSMSNIRAVSKLCRAHGVPMYFDACRFAENAWFIKTNETGYENK 171
Query: 518 TGVRVLTVCFGATDTALLTDEK 583
T + + F D ++ +K
Sbjct: 172 TPLEIAQEMFSHADGCTMSAKK 193
>SB_31088| Best HMM Match : CAP_GLY (HMM E-Value=2.2e-37)
Length = 947
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Frame = +2
Query: 41 IGESVVRILLDEGVKHIAILDIAEEAGKS----LQVELNSKYGNKTKFYRS 181
IGE VV D ++ + + IA E S + +EL+ +YGN T F+RS
Sbjct: 239 IGERVVTFKDDRELRGV-VRYIANEPDDSDMIAVGIELDERYGNGTGFFRS 288
>SB_25250| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 413
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +2
Query: 44 GESVVRILLDEG--VKHIAILDIAEEAGKSLQVELNSKYGNKTKFYRSDVTNEEHFLGIL 217
GE ILLD+ K IL K+ + L+ +G KT + D ++ E GIL
Sbjct: 67 GEKATGILLDDSHDEKTAYILLDDSHGEKATYILLDDSHGEKTAYILLDDSHAEKATGIL 126
Query: 218 NAVVQEQGGIDVVINNA 268
+ D++++++
Sbjct: 127 LDDSHAEKATDIILDDS 143
>SB_19040| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +2
Query: 8 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNK 163
+VV +TGA++GIG + L G H+ + + K+ + EL+ K NK
Sbjct: 46 RVVMVTGASSGIGLATASALAAHGA-HVVM--ACRDMEKAHKAELHIKKTNK 94
>SB_3125| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1268
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 8 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAE 112
K VFITGA+ GIG+++ + +G + AE
Sbjct: 6 KTVFITGASRGIGKAIAVKVARDGANVVIAAKTAE 40
>SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07)
Length = 384
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 8 KVVFITGAATGIGESVVRILLDEGVK 85
KV +TG TGIG+++ LL G K
Sbjct: 17 KVAIVTGGGTGIGKAIAAELLSLGSK 42
>SB_16518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +2
Query: 8 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNK 163
+VV +TGA++GIG + L G H+ + + K+ + EL+ K NK
Sbjct: 94 RVVMVTGASSGIGLATASALAAHGA-HVVM--ACRDMEKAHKAELHIKKTNK 142
>SB_14258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 8 KVVFITGAATGIGESVVRILLDEGVK 85
KV +ITGA++GIGE + L G K
Sbjct: 52 KVAWITGASSGIGEFLAYQLAGNGCK 77
>SB_26678| Best HMM Match : I-set (HMM E-Value=1e-07)
Length = 563
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -2
Query: 553 CTKAHCQYSDPGFRKVFRSTDAVTELQHSAFSGEVY 446
CT+ H + +DP + ++F+ + LQ S +VY
Sbjct: 373 CTEDHVEEADPTYNRLFQLSPDPARLQPSHVLNQVY 408
>SB_20705| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 976
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 8 KVVFITGAATGIGESVVRILLDEGVK 85
KVV+ITGA++GIGE + G K
Sbjct: 871 KVVWITGASSGIGEHLAYEFTKHGSK 896
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 59 RILLDEGVKHIAILDIAEEAGKSL 130
++L D+ KH AIL++AE AG+ L
Sbjct: 2279 QLLKDDIAKHNAILEMAENAGQQL 2302
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,573,935
Number of Sequences: 59808
Number of extensions: 391113
Number of successful extensions: 1000
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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