Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30033
(638 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 82 4e-18
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 22 4.4
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 7.6
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 7.6
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 7.6
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 7.6
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 7.6
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 21 7.6
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 21 7.6
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 7.6
>AY217747-1|AAP45005.1| 246|Apis mellifera short-chain
dehydrogenase/reductase protein.
Length = 246
Score = 82.2 bits (194), Expect = 4e-18
Identities = 52/188 (27%), Positives = 100/188 (53%), Gaps = 9/188 (4%)
Frame = +2
Query: 5 DKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNKTKFYRSD 184
D+V +TGA +GIG+ ++ L+ +G+K I I ++ K+L EL SK G K + D
Sbjct: 7 DEVALVTGANSGIGKCLIECLVGKGMKVIGIAPQVDKM-KTLVEELKSKPG-KLVPLQCD 64
Query: 185 VTNEEHFLGILNAVVQEQGGIDVVINNA------ALMNDSIGIYKKAIEVNVTALITSTL 346
++N+ L ++ V + G ID++INNA L ND + +KK ++N+ L
Sbjct: 65 LSNQNDILKVIEWVEKNLGAIDILINNATINIDVTLQNDEVLDWKKIFDINLLGLTCMIQ 124
Query: 347 KAIEIMGKHSGGKGGTVINVSSVAALT---QSHVMPIYFATKSAVLQFSNCVGRPEHFSK 517
+ +++M K G G ++N++ + L + P Y A+K A+ ++C+ +
Sbjct: 125 EVLKLM-KKKGINNGIIVNINDASGLNLLPMNRNRPAYLASKCALTTLTDCLRSELAQCE 183
Query: 518 TGVRVLTV 541
+ ++V+++
Sbjct: 184 SNIKVISI 191
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 22.2 bits (45), Expect = 4.4
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -2
Query: 58 DHRFTDARCSTGY 20
D+ FT+ RC GY
Sbjct: 290 DYGFTECRCDPGY 302
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = +1
Query: 274 HERQYWHLQKSHRGQRDRLNNEYI 345
H R+ W +Q+ + +RL + I
Sbjct: 38 HRREVWLIQQEREREHERLMKKMI 61
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = +1
Query: 274 HERQYWHLQKSHRGQRDRLNNEYI 345
H R+ W +Q+ + +RL + I
Sbjct: 38 HRREVWLIQQEREREHERLMKKMI 61
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = +1
Query: 274 HERQYWHLQKSHRGQRDRLNNEYI 345
H R+ W +Q+ + +RL + I
Sbjct: 38 HRREVWLIQQEREREHERLMKKMI 61
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = +1
Query: 274 HERQYWHLQKSHRGQRDRLNNEYI 345
H R+ W +Q+ + +RL + I
Sbjct: 38 HRREVWLIQQEREREHERLMKKMI 61
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = +1
Query: 274 HERQYWHLQKSHRGQRDRLNNEYI 345
H R+ W +Q+ + +RL + I
Sbjct: 38 HRREVWLIQQEREREHERLMKKMI 61
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = +1
Query: 274 HERQYWHLQKSHRGQRDRLNNEYI 345
H R+ W +Q+ + +RL + I
Sbjct: 38 HRREVWLIQQEREREHERLMKKMI 61
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = +1
Query: 274 HERQYWHLQKSHRGQRDRLNNEYI 345
H R+ W +Q+ + +RL + I
Sbjct: 38 HRREVWLIQQEREREHERLMKKMI 61
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = +1
Query: 274 HERQYWHLQKSHRGQRDRLNNEYI 345
H R+ W +Q+ + +RL + I
Sbjct: 38 HRREVWLIQQEREREHERLMKKMI 61
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,785
Number of Sequences: 438
Number of extensions: 3971
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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