Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30026
         (311 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q01EB9 Cluster: Sen1 Sen1-related helicase; n=1; Ostreo...    32   2.2  
UniRef50_UPI0000E7F883 Cluster: PREDICTED: similar to VESPR; n=1...    32   2.9  
UniRef50_Q0EZE0 Cluster: Putative uncharacterized protein; n=1; ...    31   3.8  
UniRef50_UPI00015B625A Cluster: PREDICTED: similar to dynein hea...    30   8.7  
UniRef50_Q30TX5 Cluster: Polyferredoxin-like; n=1; Thiomicrospir...    30   8.7  

>UniRef50_Q01EB9 Cluster: Sen1 Sen1-related helicase; n=1;
           Ostreococcus tauri|Rep: Sen1 Sen1-related helicase -
           Ostreococcus tauri
          Length = 799

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 13/49 (26%), Positives = 23/49 (46%)
 Frame = +1

Query: 13  NDIKISCTLMTMTQFEFSGASHDRCSYSLLRLSFLYPGCRYGIQGLIQV 159
           N +KI C    + ++  +    +   YS L     +P CR G QG +++
Sbjct: 33  NIVKIPCVFNHLNEYRRANRLRNYARYSYLSQDIPFPNCRQGSQGALKI 81


>UniRef50_UPI0000E7F883 Cluster: PREDICTED: similar to VESPR; n=1;
           Gallus gallus|Rep: PREDICTED: similar to VESPR - Gallus
           gallus
          Length = 838

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = -2

Query: 115 ESLVLKASSCICHGTHQRTQIASWSSVYKK 26
           E++VLK SSC+C+ T   T   +W+  YKK
Sbjct: 510 ENVVLKNSSCVCNLTTPVTLDNAWAPCYKK 539


>UniRef50_Q0EZE0 Cluster: Putative uncharacterized protein; n=1;
           Mariprofundus ferrooxydans PV-1|Rep: Putative
           uncharacterized protein - Mariprofundus ferrooxydans
           PV-1
          Length = 370

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = +1

Query: 211 AVSPLITTGKLLKSRYYLSD*KDFKPTHRQHL 306
           A  PL+ +GK++ S  + S  +DF PTH+QH+
Sbjct: 328 ATVPLLFSGKVIFSELF-SGLRDFSPTHQQHV 358


>UniRef50_UPI00015B625A Cluster: PREDICTED: similar to dynein heavy
           chain isotype 1B; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to dynein heavy chain isotype 1B -
           Nasonia vitripennis
          Length = 4116

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +3

Query: 180 NS*VFATDSQCSFTADNYREVTQVTLLSKR 269
           N+ VF   S+ + T DN+ +V QVT +SKR
Sbjct: 75  NTLVFFKISETTVTEDNFHDVVQVTSISKR 104


>UniRef50_Q30TX5 Cluster: Polyferredoxin-like; n=1; Thiomicrospira
           denitrificans ATCC 33889|Rep: Polyferredoxin-like -
           Thiomicrospira denitrificans (strain ATCC 33889 / DSM
           1351)
          Length = 918

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +1

Query: 7   FKNDIKISCTLMTMTQFEFSGASHDRCSYSLLRLSFLYP 123
           +KN+  ++ + M  TQ + +G  +++  YS    SF YP
Sbjct: 834 YKNEFLLTASYMRDTQGDINGTKYEKVRYSATYPSFYYP 872


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 279,035,280
Number of Sequences: 1657284
Number of extensions: 4398859
Number of successful extensions: 7500
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7499
length of database: 575,637,011
effective HSP length: 80
effective length of database: 443,054,291
effective search space used: 10190248693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)