Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30026
         (311 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X52844-1|CAA37036.1|  803|Drosophila melanogaster protein ( Dros...    26   8.5  
BT003462-1|AAO39465.1| 1325|Drosophila melanogaster RH14840p pro...    26   8.5  
AE014297-919|AAF54367.3| 1325|Drosophila melanogaster CG8874-PA,...    26   8.5  
AE014297-918|AAF54366.1|  804|Drosophila melanogaster CG8874-PB,...    26   8.5  

>X52844-1|CAA37036.1|  803|Drosophila melanogaster protein (
           Drosophila melanogasterdfps 85D mRNA. ).
          Length = 803

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 192 RPNYLKACLKVHLNKSLYSISTT 124
           R  Y KAC K+HL  + Y +S T
Sbjct: 173 RDKYQKACRKLHLTHNEYVLSIT 195


>BT003462-1|AAO39465.1| 1325|Drosophila melanogaster RH14840p
           protein.
          Length = 1325

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 192 RPNYLKACLKVHLNKSLYSISTT 124
           R  Y KAC K+HL  + Y +S T
Sbjct: 173 RDKYQKACRKLHLTHNEYVLSIT 195


>AE014297-919|AAF54367.3| 1325|Drosophila melanogaster CG8874-PA,
           isoform A protein.
          Length = 1325

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 192 RPNYLKACLKVHLNKSLYSISTT 124
           R  Y KAC K+HL  + Y +S T
Sbjct: 173 RDKYQKACRKLHLTHNEYVLSIT 195


>AE014297-918|AAF54366.1|  804|Drosophila melanogaster CG8874-PB,
           isoform B protein.
          Length = 804

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 192 RPNYLKACLKVHLNKSLYSISTT 124
           R  Y KAC K+HL  + Y +S T
Sbjct: 173 RDKYQKACRKLHLTHNEYVLSIT 195


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,590,614
Number of Sequences: 53049
Number of extensions: 204484
Number of successful extensions: 321
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 321
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 610819518
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)