Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30024
(576 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457401-1|CAG33682.1| 410|Homo sapiens CGI-57 protein. 85 2e-16
BC012821-1|AAH12821.1| 410|Homo sapiens chromosome 2 open readi... 85 2e-16
BC001393-1|AAH01393.1| 410|Homo sapiens chromosome 2 open readi... 85 2e-16
AY007160-1|AAG02008.1| 410|Homo sapiens protein ( Homo sapiens ... 85 2e-16
AF151815-1|AAD34052.1| 410|Homo sapiens CGI-57 protein protein. 85 2e-16
BC111501-1|AAI11502.2| 566|Homo sapiens trypsin domain containi... 31 3.8
BC030242-1|AAH30242.1| 398|Homo sapiens trypsin domain containi... 31 3.8
AL731540-5|CAI13685.1| 566|Homo sapiens trypsin domain containi... 31 3.8
AL731540-4|CAI13686.1| 398|Homo sapiens trypsin domain containi... 31 3.8
Z98882-1|CAI95591.1| 756|Homo sapiens RAB11 family interacting ... 30 6.7
BC051360-1|AAH51360.1| 756|Homo sapiens RAB11 family interactin... 30 6.7
AL049542-2|CAI95788.1| 756|Homo sapiens RAB11 family interactin... 30 6.7
AL023881-6|CAI95593.1| 756|Homo sapiens RAB11 family interactin... 30 6.7
AF395731-1|AAL12940.1| 756|Homo sapiens eferin protein. 30 6.7
AE006463-12|AAK61232.1| 756|Homo sapiens unknown function protein. 30 6.7
AB014565-1|BAA31640.2| 760|Homo sapiens KIAA0665 protein protein. 30 6.7
>CR457401-1|CAG33682.1| 410|Homo sapiens CGI-57 protein.
Length = 410
Score = 85.0 bits (201), Expect = 2e-16
Identities = 47/137 (34%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Frame = +3
Query: 171 HKEFLKRITKTLYYGQLPSLPC----LSLPVTEISCETWXXXXXXXXXXXXHADWSASMA 338
H++ RI + LYYG C LS PV +I+ E + A ++
Sbjct: 28 HQKLSARIRRRLYYGWDWEADCSLEELSSPVADIAVEL-LQKAAPSPIRRLQKKYVAHVS 86
Query: 339 RAACVSPCAXXXXXXXXXXXNKHNPNYVAAAAPSELFLVSLMVGNKFLQDDGEDDEVICS 518
R AC+SPCA NP+Y+ + S+LFL+S+MV +K+L D+GE++EV
Sbjct: 87 REACISPCAMMLALVYIERLRHRNPDYLQHVSSSDLFLISMMVASKYLYDEGEEEEVFND 146
Query: 519 EWAASGGMELKQLKKLE 569
EW A+GG+ + L LE
Sbjct: 147 EWGAAGGVAVPTLNALE 163
>BC012821-1|AAH12821.1| 410|Homo sapiens chromosome 2 open reading
frame 24 protein.
Length = 410
Score = 85.0 bits (201), Expect = 2e-16
Identities = 47/137 (34%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Frame = +3
Query: 171 HKEFLKRITKTLYYGQLPSLPC----LSLPVTEISCETWXXXXXXXXXXXXHADWSASMA 338
H++ RI + LYYG C LS PV +I+ E + A ++
Sbjct: 28 HQKLSARIRRRLYYGWDWEADCSLEELSSPVADIAVEL-LQKAAPSPIRRLQKKYVAHVS 86
Query: 339 RAACVSPCAXXXXXXXXXXXNKHNPNYVAAAAPSELFLVSLMVGNKFLQDDGEDDEVICS 518
R AC+SPCA NP+Y+ + S+LFL+S+MV +K+L D+GE++EV
Sbjct: 87 REACISPCAMMLALVYIERLRHRNPDYLQHVSSSDLFLISMMVASKYLYDEGEEEEVFND 146
Query: 519 EWAASGGMELKQLKKLE 569
EW A+GG+ + L LE
Sbjct: 147 EWGAAGGVAVPTLNALE 163
>BC001393-1|AAH01393.1| 410|Homo sapiens chromosome 2 open reading
frame 24 protein.
Length = 410
Score = 85.0 bits (201), Expect = 2e-16
Identities = 47/137 (34%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Frame = +3
Query: 171 HKEFLKRITKTLYYGQLPSLPC----LSLPVTEISCETWXXXXXXXXXXXXHADWSASMA 338
H++ RI + LYYG C LS PV +I+ E + A ++
Sbjct: 28 HQKLSARIRRRLYYGWDWEADCSLEELSSPVADIAVEL-LQKAAPSPIRRLQKKYVAHVS 86
Query: 339 RAACVSPCAXXXXXXXXXXXNKHNPNYVAAAAPSELFLVSLMVGNKFLQDDGEDDEVICS 518
R AC+SPCA NP+Y+ + S+LFL+S+MV +K+L D+GE++EV
Sbjct: 87 REACISPCAMMLALVYIERLRHRNPDYLQHVSSSDLFLISMMVASKYLYDEGEEEEVFND 146
Query: 519 EWAASGGMELKQLKKLE 569
EW A+GG+ + L LE
Sbjct: 147 EWGAAGGVAVPTLNALE 163
>AY007160-1|AAG02008.1| 410|Homo sapiens protein ( Homo sapiens
clone CDABP0125 mRNA sequence. ).
Length = 410
Score = 85.0 bits (201), Expect = 2e-16
Identities = 47/137 (34%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Frame = +3
Query: 171 HKEFLKRITKTLYYGQLPSLPC----LSLPVTEISCETWXXXXXXXXXXXXHADWSASMA 338
H++ RI + LYYG C LS PV +I+ E + A ++
Sbjct: 28 HQKLSARIRRRLYYGWDWEADCSLEELSSPVADIAVEL-LQKAAPSPIRRLQKKYVAHVS 86
Query: 339 RAACVSPCAXXXXXXXXXXXNKHNPNYVAAAAPSELFLVSLMVGNKFLQDDGEDDEVICS 518
R AC+SPCA NP+Y+ + S+LFL+S+MV +K+L D+GE++EV
Sbjct: 87 REACISPCAMMLALVYIERLRHRNPDYLQHVSSSDLFLISMMVASKYLYDEGEEEEVFND 146
Query: 519 EWAASGGMELKQLKKLE 569
EW A+GG+ + L LE
Sbjct: 147 EWGAAGGVAVPTLNALE 163
>AF151815-1|AAD34052.1| 410|Homo sapiens CGI-57 protein protein.
Length = 410
Score = 84.6 bits (200), Expect = 2e-16
Identities = 47/137 (34%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Frame = +3
Query: 171 HKEFLKRITKTLYYGQLPSLPC----LSLPVTEISCETWXXXXXXXXXXXXHADWSASMA 338
H++ RI + LYYG C LS PV +I+ E + A ++
Sbjct: 28 HQKLSARIRRGLYYGWDWEADCSLEELSSPVADIAVEL-LQKAAPSPIRRLQKKYVAHVS 86
Query: 339 RAACVSPCAXXXXXXXXXXXNKHNPNYVAAAAPSELFLVSLMVGNKFLQDDGEDDEVICS 518
R AC+SPCA NP+Y+ + S+LFL+S+MV +K+L D+GE++EV
Sbjct: 87 REACISPCAMMLALVYIERLRHRNPDYLQHVSSSDLFLISMMVASKYLYDEGEEEEVFND 146
Query: 519 EWAASGGMELKQLKKLE 569
EW A+GG+ + L LE
Sbjct: 147 EWGAAGGVAVPTLNALE 163
>BC111501-1|AAI11502.2| 566|Homo sapiens trypsin domain containing
1 protein.
Length = 566
Score = 30.7 bits (66), Expect = 3.8
Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = +2
Query: 302 APTARGLVG--EYGPGSLCVPMCAS--AGAPLPRETQQAQP 412
APTA G G E G LC P CAS G P P + QP
Sbjct: 88 APTAAGPGGGAERGRPGLCTPQCASLEPGPPAPSRGRPLQP 128
>BC030242-1|AAH30242.1| 398|Homo sapiens trypsin domain containing
1 protein.
Length = 398
Score = 30.7 bits (66), Expect = 3.8
Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = +2
Query: 302 APTARGLVG--EYGPGSLCVPMCAS--AGAPLPRETQQAQP 412
APTA G G E G LC P CAS G P P + QP
Sbjct: 88 APTAAGPGGGAERGRPGLCTPQCASLEPGPPAPSRGRPLQP 128
>AL731540-5|CAI13685.1| 566|Homo sapiens trypsin domain containing
1 protein.
Length = 566
Score = 30.7 bits (66), Expect = 3.8
Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = +2
Query: 302 APTARGLVG--EYGPGSLCVPMCAS--AGAPLPRETQQAQP 412
APTA G G E G LC P CAS G P P + QP
Sbjct: 88 APTAAGPGGGAERGRPGLCTPQCASLEPGPPAPSRGRPLQP 128
>AL731540-4|CAI13686.1| 398|Homo sapiens trypsin domain containing
1 protein.
Length = 398
Score = 30.7 bits (66), Expect = 3.8
Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = +2
Query: 302 APTARGLVG--EYGPGSLCVPMCAS--AGAPLPRETQQAQP 412
APTA G G E G LC P CAS G P P + QP
Sbjct: 88 APTAAGPGGGAERGRPGLCTPQCASLEPGPPAPSRGRPLQP 128
>Z98882-1|CAI95591.1| 756|Homo sapiens RAB11 family interacting
protein 3 (class II) protein.
Length = 756
Score = 29.9 bits (64), Expect = 6.7
Identities = 18/38 (47%), Positives = 19/38 (50%)
Frame = +2
Query: 296 FTAPTARGLVGEYGPGSLCVPMCASAGAPLPRETQQAQ 409
F APTA L E GPGS P S PLP E +Q
Sbjct: 164 FPAPTAGELALEQGPGSPPQPSDLSQTHPLPSEPVGSQ 201
>BC051360-1|AAH51360.1| 756|Homo sapiens RAB11 family interacting
protein 3 (class II) protein.
Length = 756
Score = 29.9 bits (64), Expect = 6.7
Identities = 18/38 (47%), Positives = 19/38 (50%)
Frame = +2
Query: 296 FTAPTARGLVGEYGPGSLCVPMCASAGAPLPRETQQAQ 409
F APTA L E GPGS P S PLP E +Q
Sbjct: 164 FPAPTAGELALEQGPGSPPQPSDLSQTHPLPSEPVGSQ 201
>AL049542-2|CAI95788.1| 756|Homo sapiens RAB11 family interacting
protein 3 (class II) protein.
Length = 756
Score = 29.9 bits (64), Expect = 6.7
Identities = 18/38 (47%), Positives = 19/38 (50%)
Frame = +2
Query: 296 FTAPTARGLVGEYGPGSLCVPMCASAGAPLPRETQQAQ 409
F APTA L E GPGS P S PLP E +Q
Sbjct: 164 FPAPTAGELALEQGPGSPPQPSDLSQTHPLPSEPVGSQ 201
>AL023881-6|CAI95593.1| 756|Homo sapiens RAB11 family interacting
protein 3 (class II) protein.
Length = 756
Score = 29.9 bits (64), Expect = 6.7
Identities = 18/38 (47%), Positives = 19/38 (50%)
Frame = +2
Query: 296 FTAPTARGLVGEYGPGSLCVPMCASAGAPLPRETQQAQ 409
F APTA L E GPGS P S PLP E +Q
Sbjct: 164 FPAPTAGELALEQGPGSPPQPSDLSQTHPLPSEPVGSQ 201
>AF395731-1|AAL12940.1| 756|Homo sapiens eferin protein.
Length = 756
Score = 29.9 bits (64), Expect = 6.7
Identities = 18/38 (47%), Positives = 19/38 (50%)
Frame = +2
Query: 296 FTAPTARGLVGEYGPGSLCVPMCASAGAPLPRETQQAQ 409
F APTA L E GPGS P S PLP E +Q
Sbjct: 164 FPAPTAGELALEQGPGSPPQPSDLSQTHPLPSEPVGSQ 201
>AE006463-12|AAK61232.1| 756|Homo sapiens unknown function protein.
Length = 756
Score = 29.9 bits (64), Expect = 6.7
Identities = 18/38 (47%), Positives = 19/38 (50%)
Frame = +2
Query: 296 FTAPTARGLVGEYGPGSLCVPMCASAGAPLPRETQQAQ 409
F APTA L E GPGS P S PLP E +Q
Sbjct: 164 FPAPTAGELALEQGPGSPPQPSDLSQTHPLPSEPVGSQ 201
>AB014565-1|BAA31640.2| 760|Homo sapiens KIAA0665 protein protein.
Length = 760
Score = 29.9 bits (64), Expect = 6.7
Identities = 18/38 (47%), Positives = 19/38 (50%)
Frame = +2
Query: 296 FTAPTARGLVGEYGPGSLCVPMCASAGAPLPRETQQAQ 409
F APTA L E GPGS P S PLP E +Q
Sbjct: 168 FPAPTAGELALEQGPGSPPQPSDLSQTHPLPSEPVGSQ 205
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,943,186
Number of Sequences: 237096
Number of extensions: 1872050
Number of successful extensions: 3901
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3901
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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