Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30023
         (527 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061579-1|AAL29127.1|  613|Drosophila melanogaster SD02991p pro...    51   1e-06
AF247763-1|AAF74194.1|  613|Drosophila melanogaster SCAR protein.      51   1e-06
AE014134-2001|AAF53042.1|  613|Drosophila melanogaster CG4636-PA...    51   1e-06
BT025187-1|ABF02289.1|  472|Drosophila melanogaster IP15591p pro...    49   5e-06
BT023826-1|AAZ86747.1|  534|Drosophila melanogaster RE59757p pro...    49   5e-06
AE014297-2610|AAF55617.2|  534|Drosophila melanogaster CG31043-P...    49   5e-06
AE014297-2609|AAZ52530.1| 1044|Drosophila melanogaster CG31043-P...    49   5e-06
AE014297-2608|AAF55620.3| 1788|Drosophila melanogaster CG31043-P...    49   5e-06
BT001613-1|AAN71368.1|  496|Drosophila melanogaster RE33426p pro...    29   3.0  
AF223353-1|AAL14871.1|  496|Drosophila melanogaster nucleolar KK...    29   3.0  
AE014297-3151|AAF55992.2|  496|Drosophila melanogaster CG13849-P...    29   3.0  
AY075195-1|AAL68064.1|  753|Drosophila melanogaster AT13606p pro...    29   5.2  
AE014297-164|AAF52083.2|  753|Drosophila melanogaster CG14660-PA...    29   5.2  

>AY061579-1|AAL29127.1|  613|Drosophila melanogaster SD02991p
           protein.
          Length = 613

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 26/68 (38%), Positives = 42/68 (61%)
 Frame = +3

Query: 309 MPFVPRAVEPKYLSRTSLRDENGKPKIADEELQAVTNCTLTNALKQLASLVLLAEDIFSE 488
           MP   R++EP +++R+  + +    ++   EL+ VTN TLTN ++QL+SL   AED+F E
Sbjct: 1   MPLPKRSIEPVHVARSVYQQD----ELQSVELETVTNTTLTNIIRQLSSLSKHAEDVFGE 56

Query: 489 LTEQLQEI 512
           L   +  I
Sbjct: 57  LARDVGNI 64


>AF247763-1|AAF74194.1|  613|Drosophila melanogaster SCAR protein.
          Length = 613

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 26/68 (38%), Positives = 42/68 (61%)
 Frame = +3

Query: 309 MPFVPRAVEPKYLSRTSLRDENGKPKIADEELQAVTNCTLTNALKQLASLVLLAEDIFSE 488
           MP   R++EP +++R+  + +    ++   EL+ VTN TLTN ++QL+SL   AED+F E
Sbjct: 1   MPLPKRSIEPVHVARSVYQQD----ELQSVELETVTNTTLTNIIRQLSSLSKHAEDVFGE 56

Query: 489 LTEQLQEI 512
           L   +  I
Sbjct: 57  LARDVGNI 64


>AE014134-2001|AAF53042.1|  613|Drosophila melanogaster CG4636-PA
           protein.
          Length = 613

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 26/68 (38%), Positives = 42/68 (61%)
 Frame = +3

Query: 309 MPFVPRAVEPKYLSRTSLRDENGKPKIADEELQAVTNCTLTNALKQLASLVLLAEDIFSE 488
           MP   R++EP +++R+  + +    ++   EL+ VTN TLTN ++QL+SL   AED+F E
Sbjct: 1   MPLPKRSIEPVHVARSVYQQD----ELQSVELETVTNTTLTNIIRQLSSLSKHAEDVFGE 56

Query: 489 LTEQLQEI 512
           L   +  I
Sbjct: 57  LARDVGNI 64


>BT025187-1|ABF02289.1|  472|Drosophila melanogaster IP15591p
           protein.
          Length = 472

 Score = 48.8 bits (111), Expect = 5e-06
 Identities = 21/42 (50%), Positives = 31/42 (73%)
 Frame = +3

Query: 387 IADEELQAVTNCTLTNALKQLASLVLLAEDIFSELTEQLQEI 512
           ++  E  +++N TL+NAL+QLASLVL+A DIF +L   LQ +
Sbjct: 134 VSGHEFDSISNITLSNALRQLASLVLIASDIFDDLQRDLQAV 175


>BT023826-1|AAZ86747.1|  534|Drosophila melanogaster RE59757p
           protein.
          Length = 534

 Score = 48.8 bits (111), Expect = 5e-06
 Identities = 21/42 (50%), Positives = 31/42 (73%)
 Frame = +3

Query: 387 IADEELQAVTNCTLTNALKQLASLVLLAEDIFSELTEQLQEI 512
           ++  E  +++N TL+NAL+QLASLVL+A DIF +L   LQ +
Sbjct: 134 VSGHEFDSISNITLSNALRQLASLVLIASDIFDDLQRDLQAV 175


>AE014297-2610|AAF55617.2|  534|Drosophila melanogaster CG31043-PB,
           isoform B protein.
          Length = 534

 Score = 48.8 bits (111), Expect = 5e-06
 Identities = 21/42 (50%), Positives = 31/42 (73%)
 Frame = +3

Query: 387 IADEELQAVTNCTLTNALKQLASLVLLAEDIFSELTEQLQEI 512
           ++  E  +++N TL+NAL+QLASLVL+A DIF +L   LQ +
Sbjct: 134 VSGHEFDSISNITLSNALRQLASLVLIASDIFDDLQRDLQAV 175


>AE014297-2609|AAZ52530.1| 1044|Drosophila melanogaster CG31043-PC,
           isoform C protein.
          Length = 1044

 Score = 48.8 bits (111), Expect = 5e-06
 Identities = 21/42 (50%), Positives = 31/42 (73%)
 Frame = +3

Query: 387 IADEELQAVTNCTLTNALKQLASLVLLAEDIFSELTEQLQEI 512
           ++  E  +++N TL+NAL+QLASLVL+A DIF +L   LQ +
Sbjct: 134 VSGHEFDSISNITLSNALRQLASLVLIASDIFDDLQRDLQAV 175


>AE014297-2608|AAF55620.3| 1788|Drosophila melanogaster CG31043-PA,
           isoform A protein.
          Length = 1788

 Score = 48.8 bits (111), Expect = 5e-06
 Identities = 21/42 (50%), Positives = 31/42 (73%)
 Frame = +3

Query: 387 IADEELQAVTNCTLTNALKQLASLVLLAEDIFSELTEQLQEI 512
           ++  E  +++N TL+NAL+QLASLVL+A DIF +L   LQ +
Sbjct: 134 VSGHEFDSISNITLSNALRQLASLVLIASDIFDDLQRDLQAV 175


>BT001613-1|AAN71368.1|  496|Drosophila melanogaster RE33426p
           protein.
          Length = 496

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 25/104 (24%), Positives = 45/104 (43%)
 Frame = +3

Query: 135 HVLSKTRVLVKVHRSGCRLIQSGGYLTFFVIMC*MDVGITFNFAVREWVNEYFGTNIEMP 314
           H  S+ +V   VHRS   +IQS   L         DV  TF+  +REW + +F      P
Sbjct: 151 HSYSRAKVKFNVHRSDNMIIQSIALLD----QLDKDVN-TFSMRIREWYSYHF------P 199

Query: 315 FVPRAVEPKYLSRTSLRDENGKPKIADEELQAVTNCTLTNALKQ 446
            + + V   Y+   + +    +  +  ++L+ +    + +A  Q
Sbjct: 200 ELVKIVPDNYMFAKAAKFIKDRKNLTQDQLEDLEKIVMDSAKAQ 243


>AF223353-1|AAL14871.1|  496|Drosophila melanogaster nucleolar KKE/D
           repeat protein protein.
          Length = 496

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 25/104 (24%), Positives = 45/104 (43%)
 Frame = +3

Query: 135 HVLSKTRVLVKVHRSGCRLIQSGGYLTFFVIMC*MDVGITFNFAVREWVNEYFGTNIEMP 314
           H  S+ +V   VHRS   +IQS   L         DV  TF+  +REW + +F      P
Sbjct: 151 HSYSRAKVKFNVHRSDNMIIQSIALLD----QLDKDVN-TFSMRIREWYSYHF------P 199

Query: 315 FVPRAVEPKYLSRTSLRDENGKPKIADEELQAVTNCTLTNALKQ 446
            + + V   Y+   + +    +  +  ++L+ +    + +A  Q
Sbjct: 200 ELVKIVPDNYMFAKAAKFIKDRKNLTQDQLEDLEKIVMDSAKAQ 243


>AE014297-3151|AAF55992.2|  496|Drosophila melanogaster CG13849-PA
           protein.
          Length = 496

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 25/104 (24%), Positives = 45/104 (43%)
 Frame = +3

Query: 135 HVLSKTRVLVKVHRSGCRLIQSGGYLTFFVIMC*MDVGITFNFAVREWVNEYFGTNIEMP 314
           H  S+ +V   VHRS   +IQS   L         DV  TF+  +REW + +F      P
Sbjct: 151 HSYSRAKVKFNVHRSDNMIIQSIALLD----QLDKDVN-TFSMRIREWYSYHF------P 199

Query: 315 FVPRAVEPKYLSRTSLRDENGKPKIADEELQAVTNCTLTNALKQ 446
            + + V   Y+   + +    +  +  ++L+ +    + +A  Q
Sbjct: 200 ELVKIVPDNYMFAKAAKFIKDRKNLTQDQLEDLEKIVMDSAKAQ 243


>AY075195-1|AAL68064.1|  753|Drosophila melanogaster AT13606p
           protein.
          Length = 753

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 254 CNSHIHSTHYHKKRQVTATLN*PTS*PVN 168
           C  H H  HYH++R V  T     + P+N
Sbjct: 325 CTRHRHHPHYHRQRSVPKTYQDRGNSPIN 353


>AE014297-164|AAF52083.2|  753|Drosophila melanogaster CG14660-PA
           protein.
          Length = 753

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 254 CNSHIHSTHYHKKRQVTATLN*PTS*PVN 168
           C  H H  HYH++R V  T     + P+N
Sbjct: 325 CTRHRHHPHYHRQRSVPKTYQDRGNSPIN 353


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,222,776
Number of Sequences: 53049
Number of extensions: 457801
Number of successful extensions: 1261
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1256
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1970722560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)