Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30021
         (650 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    25   0.63 
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    23   3.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   7.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   7.8  
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    21   7.8  

>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
           protein.
          Length = 85

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -3

Query: 273 SLNILNIFAYFFGSYISSYTNDRPHF 196
           SLN+ N+F  F G+Y  S      H+
Sbjct: 31  SLNLSNLFWLFVGTYFPSLIGANEHY 56


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -2

Query: 151 QSFCIINFQNTFPYC 107
           +++C+ +F NT  YC
Sbjct: 146 KAYCLFSFLNTIVYC 160


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -2

Query: 418 YFFFNGNITKMLPHETRFFSRNFKT 344
           YFFFN  + +   H   F   + KT
Sbjct: 168 YFFFNSEVLQKANHALIFGKLDTKT 192


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -2

Query: 418 YFFFNGNITKMLPHETRFFSRNFKT 344
           YFFFN  + +   H   F   + KT
Sbjct: 168 YFFFNSEVLQKANHALIFGKLDTKT 192


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 382 PHETRFFSRNFKTLWILLQHYQ 317
           P E  +  RNF   + L +H+Q
Sbjct: 5   PQECPYCRRNFSCYYSLKRHFQ 26


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,430
Number of Sequences: 438
Number of extensions: 3469
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)