Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30017
(462 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 74 7e-16
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 22 2.8
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 4.9
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 4.9
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 4.9
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 4.9
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 4.9
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 21 4.9
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 21 4.9
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 4.9
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 21 8.5
>AY217747-1|AAP45005.1| 246|Apis mellifera short-chain
dehydrogenase/reductase protein.
Length = 246
Score = 74.1 bits (174), Expect = 7e-16
Identities = 45/148 (30%), Positives = 81/148 (54%), Gaps = 6/148 (4%)
Frame = +2
Query: 17 WKDKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNKTKFYR 196
W D+V +TGA +GIG+ ++ L+ +G+K I I ++ K+L EL SK G K +
Sbjct: 5 WIDEVALVTGANSGIGKCLIECLVGKGMKVIGIAPQVDKM-KTLVEELKSKPG-KLVPLQ 62
Query: 197 SDVTDEEHFLGILNAVVQEQGGIDVVINNA------ALMNDSIGIYKKAIEVNVTALITS 358
D++++ L ++ V + G ID++INNA L ND + +KK ++N+ L
Sbjct: 63 CDLSNQNDILKVIEWVEKNLGAIDILINNATINIDVTLQNDEVLDWKKIFDINLLGLTCM 122
Query: 359 TLKAIEIMGKHSGGKGGTVINVSSVAAL 442
+ +++M K G G ++N++ + L
Sbjct: 123 IQEVLKLM-KKKGINNGIIVNINDASGL 149
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 22.2 bits (45), Expect = 2.8
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 63 PMPVAAPVIKTTLSFHSCDYS 1
P+P+ A IKT L S DY+
Sbjct: 413 PVPLIAREIKTDLKLASGDYT 433
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 4.9
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +1
Query: 292 HERQYWHLQKSH*GQRDRLNNKYI 363
H R+ W +Q+ + +RL K I
Sbjct: 38 HRREVWLIQQEREREHERLMKKMI 61
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 4.9
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +1
Query: 292 HERQYWHLQKSH*GQRDRLNNKYI 363
H R+ W +Q+ + +RL K I
Sbjct: 38 HRREVWLIQQEREREHERLMKKMI 61
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.4 bits (43), Expect = 4.9
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +1
Query: 292 HERQYWHLQKSH*GQRDRLNNKYI 363
H R+ W +Q+ + +RL K I
Sbjct: 38 HRREVWLIQQEREREHERLMKKMI 61
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.4 bits (43), Expect = 4.9
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +1
Query: 292 HERQYWHLQKSH*GQRDRLNNKYI 363
H R+ W +Q+ + +RL K I
Sbjct: 38 HRREVWLIQQEREREHERLMKKMI 61
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 4.9
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +1
Query: 292 HERQYWHLQKSH*GQRDRLNNKYI 363
H R+ W +Q+ + +RL K I
Sbjct: 38 HRREVWLIQQEREREHERLMKKMI 61
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 4.9
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +1
Query: 292 HERQYWHLQKSH*GQRDRLNNKYI 363
H R+ W +Q+ + +RL K I
Sbjct: 38 HRREVWLIQQEREREHERLMKKMI 61
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.4 bits (43), Expect = 4.9
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +1
Query: 292 HERQYWHLQKSH*GQRDRLNNKYI 363
H R+ W +Q+ + +RL K I
Sbjct: 38 HRREVWLIQQEREREHERLMKKMI 61
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.4 bits (43), Expect = 4.9
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +1
Query: 292 HERQYWHLQKSH*GQRDRLNNKYI 363
H R+ W +Q+ + +RL K I
Sbjct: 38 HRREVWLIQQEREREHERLMKKMI 61
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 20.6 bits (41), Expect = 8.5
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -1
Query: 306 ILSFMRAALLITTSMPPCSWTTALRI 229
IL+FM A + S+P S+ A I
Sbjct: 271 ILTFMTLASKVENSLPKVSYIKASEI 296
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,612
Number of Sequences: 438
Number of extensions: 2677
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12312900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -