Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30013
         (509 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        25   1.5  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   2.0  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   6.0  
AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450 CY...    23   6.0  

>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +2

Query: 140 QKQKYLPRMATGELIGCFGLTEPNFGSDAGGLVTRAKHDAK 262
           QK   LP+    + +      EP  GSD GG  T +  D K
Sbjct: 572 QKALVLPKRNAPKALEALVKDEPKEGSDKGGASTPSGDDPK 612


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 92   QSSLAMGSIYMYGTEDQKQKY 154
            Q   A GS+ M+ TEDQK+ Y
Sbjct: 1570 QKKKAGGSLEMFMTEDQKKYY 1590


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
 Frame = -3

Query: 258 ASCFAL-VTNPPASLPKLGSVNPKQPINSPVA 166
           A C  L    P  +LPKL +    +PI  P A
Sbjct: 77  APCSKLFAAEPRVALPKLSATGASKPIAEPKA 108


>AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450
           CYPm3r5 protein.
          Length = 519

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 436 KXNFPLILGVSKPFFTSARSHY 371
           K  FPL+LG+++ F    R  Y
Sbjct: 152 KAAFPLVLGIAEQFCGFLREQY 173


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 516,205
Number of Sequences: 2352
Number of extensions: 10036
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46091631
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)