Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30006
         (676 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant r...    27   0.54 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   2.9  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   6.7  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    23   8.8  

>AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant
           receptor Or2 protein.
          Length = 378

 Score = 27.1 bits (57), Expect = 0.54
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -1

Query: 262 VRIWLHWSFLRCP 224
           VR+WL WS+LR P
Sbjct: 13  VRVWLFWSYLRRP 25


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = -2

Query: 579 NMFSPSILLYHIPFLCSLPR-RYVRHT*THIVFHAIHPFL 463
           N+F+P+ L YH P +   PR + +R +      H ++P L
Sbjct: 380 NLFNPAALAYHDPAIYLDPRYQMLRASHHSAAGHPLYPSL 419


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 519  RYVRHT*THIVFHAIHPFLLRSTSSST 439
            R+V  T   +VF  +  FLL+ TS  T
Sbjct: 1181 RHVNETSKFVVFRPVDSFLLKMTSLFT 1207


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 235 LRCPLSISYTYFRRYIF 185
           L  P + SYT+ RR++F
Sbjct: 147 LAVPFTPSYTFMRRWVF 163


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 743,148
Number of Sequences: 2352
Number of extensions: 15743
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)