Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30006
         (676 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK026973-1|BAB15609.1|  692|Homo sapiens protein ( Homo sapiens ...    31   3.7  
AJ717666-1|CAG30691.1|  233|Homo sapiens THAP domain containing ...    31   3.7  
AK126213-1|BAC86488.1|  262|Homo sapiens protein ( Homo sapiens ...    30   8.6  

>AK026973-1|BAB15609.1|  692|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23320 fis, clone HEP12381. ).
          Length = 692

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 16/34 (47%), Positives = 21/34 (61%)
 Frame = -3

Query: 521 DDM*DTHEHISSSTQSIHFFLGLPHLLRV*PSTF 420
           DDM  T +H SSS+Q I +F    HLLR+  + F
Sbjct: 182 DDMKCTFQHPSSSSQQIAYFFDSCHLLRLIRNAF 215


>AJ717666-1|CAG30691.1|  233|Homo sapiens THAP domain containing 9
           protein.
          Length = 233

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 16/34 (47%), Positives = 21/34 (61%)
 Frame = -3

Query: 521 DDM*DTHEHISSSTQSIHFFLGLPHLLRV*PSTF 420
           DDM  T +H SSS+Q I +F    HLLR+  + F
Sbjct: 43  DDMKCTFQHPSSSSQQIAYFFDSCHLLRLIRNAF 76


>AK126213-1|BAC86488.1|  262|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44225 fis, clone THYMU3006168. ).
          Length = 262

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 9/102 (8%)
 Frame = -1

Query: 457 VYL-IFYEYSLPHS*LVLSYKSHCHFVSSHFHTIPILYNS--LNL*IPFFP-TLCCLFIV 290
           VY+ I Y Y   H   + +Y   C F+ +H HT    Y    +++ I        C+FI 
Sbjct: 58  VYIHIIYTYMYIH---MHAYAYMCVFICTHMHTYVYSYARVCIHMYIHIHAYAYICIFIY 114

Query: 289 NDVRVSI-----MLVRIWLHWSFLRCPLSISYTYFRRYIFAY 179
             +   +     + + +++H     C     Y + R Y+++Y
Sbjct: 115 THMHTYVYSYARICIHMYIHIHAYACICMFMYAHMRAYVYSY 156


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,396,369
Number of Sequences: 237096
Number of extensions: 2252953
Number of successful extensions: 3447
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3447
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)