Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30003
(687 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 31 0.009
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 24 1.3
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 22 4.1
AY531876-1|AAT08870.1| 38|Tribolium castaneum unknown protein. 21 7.2
AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head orthol... 21 7.2
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 21 9.5
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 21 9.5
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 9.5
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 9.5
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 9.5
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 9.5
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 31.1 bits (67), Expect = 0.009
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Frame = -2
Query: 263 DDEDSFKR---QFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKEL--KKDSVKQKRW 99
+D+D +K+ QFSK IKLG+ D+ K E +R S E KD V + +
Sbjct: 418 EDKDGYKKFYEQFSKNIKLGIHEDSQNR--AKLSELLRYHTSASGDEACSLKDYVSRIKP 475
Query: 98 NKRKLTLAERKNRIKQKKASFIKRLQ 21
N++ + +++ + +SF++R++
Sbjct: 476 NQKHIYYITGESKEQVANSSFVERVK 501
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 23.8 bits (49), Expect = 1.3
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -1
Query: 462 CRLSTHHYWCSCLWSYEG 409
C+ T HY C C + Y G
Sbjct: 76 CQDHTTHYTCHCPYGYTG 93
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 22.2 bits (45), Expect = 4.1
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = -2
Query: 275 SLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKK 138
++E+DDED+ ++ I + + + KK H ++ P KK
Sbjct: 475 AVEEDDEDAIEKPAPVKISVQEVLNRVRKPTKKLH--LKNSPISKK 518
>AY531876-1|AAT08870.1| 38|Tribolium castaneum unknown protein.
Length = 38
Score = 21.4 bits (43), Expect = 7.2
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = -1
Query: 138 ERVKERLGQTEALEQTQANIGREEKQ 61
+R+ E + QTE++E + IGR ++
Sbjct: 11 KRLFEHMLQTESIEPVKMAIGRPSEK 36
>AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head
orthologue protein.
Length = 431
Score = 21.4 bits (43), Expect = 7.2
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +2
Query: 572 EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNK 670
E + +L ++ LNM Q + SH ++ VN+
Sbjct: 301 EQMNLLHSNDLNMHQQHHQQNMSHEELSAMVNR 333
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 21.0 bits (42), Expect = 9.5
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +1
Query: 388 LRPPSTAPFIAPKT 429
L PP++ P ++PK+
Sbjct: 106 LTPPNSEPLVSPKS 119
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 21.0 bits (42), Expect = 9.5
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = -1
Query: 423 WSYEGCC*RWPQCSSFHQKIPWL*CRIQ 340
WS W CSSF Q+ C I+
Sbjct: 403 WSVNAGMWMWLSCSSFFQQFFHCYCPIK 430
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.5
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +2
Query: 572 EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRT 679
+A + IAD L ML L + + H++++R+
Sbjct: 1131 KASLINIADSLEMLNKRLDHIEKTIDPSGHISRRRS 1166
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.5
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +2
Query: 572 EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRT 679
+A + IAD L ML L + + H++++R+
Sbjct: 1131 KASLINIADSLEMLNKRLDHIEKTIDPSGHISRRRS 1166
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.5
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +2
Query: 572 EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRT 679
+A + IAD L ML L + + H++++R+
Sbjct: 1131 KASLINIADSLEMLNKRLDHIEKTIDPSGHISRRRS 1166
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.5
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +2
Query: 572 EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRT 679
+A + IAD L ML L + + H++++R+
Sbjct: 1131 KASLINIADSLEMLNKRLDHIEKTIDPSGHISRRRS 1166
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,581
Number of Sequences: 336
Number of extensions: 2918
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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