Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30003
         (687 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...   269   5e-74
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    27   0.42 
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    25   3.0  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   5.2  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score =  269 bits (660), Expect = 5e-74
 Identities = 128/207 (61%), Positives = 148/207 (71%)
 Frame = -2

Query: 680 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXDEYNVEP 501
           VCAAYSHELPRYGVKVGLTNYAAAY TG                         +EY VEP
Sbjct: 75  VCAAYSHELPRYGVKVGLTNYAAAYCTGLLVARRILQKLRLDTLYAGCTDVTGEEYLVEP 134

Query: 500 VDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEV 321
           VD GP AFRCYLDVGLARTTTG+RVFGAMKGAVDGGLN+PHS+KRFPGY AE+K FNAE+
Sbjct: 135 VDEGPAAFRCYLDVGLARTTTGSRVFGAMKGAVDGGLNIPHSVKRFPGYSAENKSFNAEM 194

Query: 320 HRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHK 141
           HR HIFGLHVA YMR+LE++DE++FKRQFSKYI LG+ AD IE IYK AH +IR  P  +
Sbjct: 195 HRDHIFGLHVANYMRTLEEEDEEAFKRQFSKYISLGIKADDIENIYKNAHASIRKIPPSR 254

Query: 140 KKELKKDSVKQKRWNKRKLTLAERKNR 60
           +   ++      RW   +   A R++R
Sbjct: 255 RNPRRRSPRSGGRWPSCRSPPARRRSR 281



 Score = 23.4 bits (48), Expect = 6.8
 Identities = 16/56 (28%), Positives = 21/56 (37%)
 Frame = -3

Query: 196 LKPSTRKPMKPSVRIHPXXXXXXXXXXXXXSAGTNAS*HWPRGKTESSKRRLPSSR 29
           + PS R P + S R                S  T  +  WPR +  S  +RLP  R
Sbjct: 250 IPPSRRNPRRRSPRSGGRWPSCRSPPARRRSRSTRPT-SWPRSRPTSKPKRLPRRR 304


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 27.5 bits (58), Expect = 0.42
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = -2

Query: 194 EAIYKKAHEAIRADPSHKKKE 132
           +++Y+K  + +R DP+HK  E
Sbjct: 238 DSVYRKVRDTVRDDPAHKNLE 258


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 194 EAIYKKAHEAIRADPSHK 141
           E +Y+   +AI+ DP+HK
Sbjct: 212 ETVYQMVKDAIKFDPAHK 229


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 395 HRQQHPS*LQRHEH 436
           H+QQHP   Q H H
Sbjct: 173 HQQQHPGHSQHHHH 186


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 669,429
Number of Sequences: 2352
Number of extensions: 12722
Number of successful extensions: 40
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)