Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS31026
(732 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769... 36 0.033
01_06_1217 + 35485182-35485949 33 0.31
08_02_0499 - 17820615-17822516,17823224-17823373,17823491-178235... 32 0.54
01_05_0772 + 25056973-25057285,25057678-25058006,25058113-250583... 32 0.54
02_05_1219 + 35011571-35011897,35012008-35013780,35013915-350140... 31 1.2
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 29 2.9
04_04_1090 - 30764340-30764704,30765092-30765204,30765414-307656... 29 3.8
04_03_0997 - 21548158-21548377,21548482-21548523,21548646-215487... 29 3.8
04_03_0496 + 16549333-16549465,16549620-16550020,16550412-165508... 29 3.8
02_05_0568 - 30034280-30034393,30034888-30035163,30035246-300353... 29 3.8
04_03_0646 + 18363847-18364858,18365501-18365578,18366161-18366798 29 5.0
03_05_0593 - 25959013-25959789 29 5.0
11_01_0390 + 2944302-2944400,2945026-2945265,2945809-2946007,294... 28 6.6
05_05_0230 - 23476919-23477372,23477656-23477695,23478578-234787... 28 6.6
10_08_0259 + 16274430-16274747,16275180-16275242,16275329-162754... 28 8.8
09_01_0037 - 604001-604957 28 8.8
05_01_0048 + 331155-333077,333208-333354,333540-334087,334481-33... 28 8.8
02_05_1329 - 35724567-35725255,35725626-35725682,35727667-35729050 28 8.8
>12_01_0831 -
7688342-7688772,7690678-7692610,7693142-7693915,
7694019-7694142,7696084-7696189,7696346-7696532
Length = 1184
Score = 35.9 bits (79), Expect = 0.033
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 5/94 (5%)
Frame = +3
Query: 216 SARLTAENRNTASPSRESD--AMQSPQPSGIPAVPSSPEIFTMPVTXSKQALFLETXLSS 389
S R + R +++ SR S A+Q P PS P+ P S + T P A L S
Sbjct: 159 SPRSMSRTRPSSAASRSSPPFALQPPTPSWRPSTPPSAKTLTPPRRSPSPASTLTPPRRS 218
Query: 390 PSP---KMYTSEVTITKQQCEPLNLGQHRKSASP 482
PSP +M T + P + +R S+SP
Sbjct: 219 PSPASRRMSTGSTPALNRTRGPSPVKTNRISSSP 252
>01_06_1217 + 35485182-35485949
Length = 255
Score = 32.7 bits (71), Expect = 0.31
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +3
Query: 255 PSRESDAMQSPQPS-GIPAVPSSPEI-FTMPVTXSKQALFLETXLSSPSP 398
PS S A SP PS + A +SP + F+ P QAL L SP+P
Sbjct: 10 PSSPSSAAASPSPSTALAAAAASPRLSFSSPSLKDLQALLLSDHSPSPTP 59
>08_02_0499 -
17820615-17822516,17823224-17823373,17823491-17823568,
17823948-17824061,17824145-17824297,17826928-17827071,
17827162-17827516,17828574-17828741,17829522-17829751,
17829916-17830049,17830686-17830749
Length = 1163
Score = 31.9 bits (69), Expect = 0.54
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3
Query: 201 QKDGHSARLTAENRNTASPSRESDAMQSPQPSGIP--AVPSSPEIFTMPVTXSKQ 359
+K S T +R ++ S+E +QS QP +P A PSS E+ T P T S Q
Sbjct: 790 EKSSDSPDATQHDREVSALSQEH--VQSAQPQQLPDCARPSSSEMATTPATTSSQ 842
>01_05_0772 +
25056973-25057285,25057678-25058006,25058113-25058360,
25058481-25059396
Length = 601
Score = 31.9 bits (69), Expect = 0.54
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Frame = +2
Query: 467 EVSEPDSVELLG*NRKINKEFGEPQEKRIKRESTEDLAKINKVFNKCG-EVKPKKIEWAR 643
E E +LLG K N + GEP R+ STED+ + K+F G E + W
Sbjct: 330 ENGELSGDDLLGLMLKSNMDSGEPSNLRM---STEDVIEECKLFYFAGMETTSVLLTWTL 386
Query: 644 VQFRRRP-YQTATDSQIXCRLXRSRPDVD 727
V P +Q ++ R +P+ D
Sbjct: 387 VVLSMHPEWQHRAREEVLSAFGRDKPNFD 415
>02_05_1219 +
35011571-35011897,35012008-35013780,35013915-35014068,
35014158-35014801
Length = 965
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +3
Query: 324 EIFTMPVTXSKQALFLETXLSSPSPKMYTSE--VTITKQQCEPLNLGQHRKSASPTVSSC 497
E+ T+P Q +F L +PSP+M + E + + + + P++L + + C
Sbjct: 541 EMLTIPEVKKDQEVFGGVTLENPSPEMDSEEPFLCLPRSRSVPISLSFGGTELNGVATGC 600
Query: 498 SDEIGKLTRNSASLKRNV 551
+ + R S S + V
Sbjct: 601 QEAEKEKNRKSLSFREKV 618
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 40 QASTNDENSPTDLSVKHVDKDI--PKVVARAAETTHAIEDNLSDKSDEQPKDLSVHRRMA 213
+ S++DE+ D S + D+D+ + A+ + A E + SD+S E+ D+
Sbjct: 361 EISSDDESDEDDSSDESSDEDVKQKQTQAKKVQAPVAQESSSSDESSEEDSDMESDEPAK 420
Query: 214 TP 219
TP
Sbjct: 421 TP 422
>04_04_1090 -
30764340-30764704,30765092-30765204,30765414-30765638,
30766432-30766553,30766617-30767174,30769207-30769477,
30772175-30773256
Length = 911
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +3
Query: 186 RSKRTQKDGHSARLTAENRNTASPSRESDAMQSPQPSGIP 305
R R Q DGH AR E R P + A SG P
Sbjct: 868 RQDRVQGDGHRARRRREERRRLPPPSSAVAADCSPSSGFP 907
>04_03_0997 -
21548158-21548377,21548482-21548523,21548646-21548722,
21548798-21548914,21549149-21549252,21549330-21549399,
21549489-21549598,21549845-21549932,21550006-21550096,
21550176-21550268,21550362-21550687,21550922-21551290,
21551934-21552020
Length = 597
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 413 RSYDHEATVRTLEFRTTQEVSEP--DSVELLG*NRKINKEFGEPQEKRIKRESTEDLAKI 586
R+Y R+L +T +++ E D V+ L + +IN FG E + ESTED ++
Sbjct: 370 RNYVKSLKKRSLWSKTLEDIVEKLVDIVQYL--HFEINASFGSSDEGELSSESTEDCQRL 427
>04_03_0496 +
16549333-16549465,16549620-16550020,16550412-16550880,
16552038-16552076,16553151-16553272,16553531-16553677,
16554097-16554186,16554274-16554398,16554567-16554772,
16554951-16555075,16555528-16555722,16556295-16556337,
16556762-16557267,16558198-16558570,16559772-16560062,
16560132-16561101,16561196-16561892,16562378-16562658,
16562731-16563400,16563860-16564034,16565103-16565659
Length = 2204
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 148 EDNLSDKSDEQPKDLSVHRRMATPHASPRRIEIPRALRE 264
E+ + + E+ K+ + RR++ H+SP E+PR E
Sbjct: 587 ENEMENSEYERKKEDDLQRRLSEAHSSPFHQELPRLTHE 625
>02_05_0568 -
30034280-30034393,30034888-30035163,30035246-30035371,
30035595-30035753,30035893-30036063,30036374-30036493,
30036565-30036924,30038800-30039686,30039790-30040363,
30041379-30041507,30042423-30042494,30042572-30042728,
30042974-30043023,30043569-30044327
Length = 1317
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +3
Query: 255 PSRESDAMQSPQPSGIPAVPSSPEIFTMPVTXSK 356
P+ E A Q PQP IPA+PS+P + T SK
Sbjct: 138 PASEFAAAQPPQP--IPAMPSAPPARMLSSTSSK 169
>04_03_0646 + 18363847-18364858,18365501-18365578,18366161-18366798
Length = 575
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/60 (23%), Positives = 30/60 (50%)
Frame = +1
Query: 34 LSQASTNDENSPTDLSVKHVDKDIPKVVARAAETTHAIEDNLSDKSDEQPKDLSVHRRMA 213
L+ DE T+ + D+++ ++ AE H I+DN+++ S + +H ++A
Sbjct: 333 LTSWKETDEIENTNEEYESTDEELD-LIDELAEIVHTIDDNMAEVSTDMSGIKKIHNQLA 391
>03_05_0593 - 25959013-25959789
Length = 258
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/62 (30%), Positives = 23/62 (37%)
Frame = +3
Query: 255 PSRESDAMQSPQPSGIPAVPSSPEIFTMPVTXSKQALFLETXLSSPSPKMYTSEVTITKQ 434
P S S S P PS +P QA FL+ PS M + + TKQ
Sbjct: 6 PPPPSSQSSSSSSSSSPVFPSPRPFMALP--HPPQAGFLDGAAEGPSSSMSPTSILETKQ 63
Query: 435 QC 440
C
Sbjct: 64 FC 65
>11_01_0390 +
2944302-2944400,2945026-2945265,2945809-2946007,
2946423-2946605,2947307-2947380,2947777-2947857,
2948501-2948512
Length = 295
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +2
Query: 446 LEFRTTQEVSEPDSVELLG*NRKINKEFGEPQEKRIKRESTED 574
++F+ +E S D V ++G + K FG Q R+KR S ED
Sbjct: 100 IKFQPPEEESIKDEVVVIGRTEDVPK-FGTTQPIRVKRLSEED 141
>05_05_0230 -
23476919-23477372,23477656-23477695,23478578-23478700,
23479114-23479151,23479289-23479674,23479875-23481053,
23481805-23481928,23482733-23482779
Length = 796
Score = 28.3 bits (60), Expect = 6.6
Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 4/106 (3%)
Frame = +3
Query: 180 T*RSKRTQKDGHSARLT-AENRNTASPSRESDAMQSPQPSGIPAVPSSPEIFTMPVTXSK 356
T ++ + D +AR T A+N ++P+ S AM + IPA+ S P T+ T
Sbjct: 159 TRQTANSTSDSAAARTTSAQNSRPSTPTSRSRAMPNSSSGAIPAM-SRPGASTISATSRS 217
Query: 357 QALFLETXL---SSPSPKMYTSEVTITKQQCEPLNLGQHRKSASPT 485
A + SS S S T P +S++PT
Sbjct: 218 NASTISATSRPGSSSSNVPGISRATSLSSSTVPSMSRSSSRSSTPT 263
>10_08_0259 +
16274430-16274747,16275180-16275242,16275329-16275424,
16275526-16275618,16276415-16276605,16276684-16276921,
16277805-16277900,16278324-16278404,16278532-16278939,
16279048-16279331,16279460-16279547,16279630-16279830,
16280032-16280118,16280119-16280238,16280536-16280708,
16281914-16282055,16282292-16282414,16282601-16282656,
16282735-16283038,16283154-16283283,16283491-16283549,
16283829-16284061,16285480-16285527,16285765-16285843,
16285925-16286169,16286338-16286722
Length = 1446
Score = 27.9 bits (59), Expect = 8.8
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 401 NVYIRSYDHEATVRTLEFRTTQEVSEPDSVE-LLG*NRKINK-EFGEPQEKRIKRESTED 574
+VY+ S EA L+F EV E VE + + +++ E E Q ++ ++ ED
Sbjct: 311 SVYLASTPQEAAALGLQFPGVDEVEEIAEVEGAVSDIKGVDEIELSEVQRRKYRKVPEED 370
Query: 575 LAKINK 592
AK+ K
Sbjct: 371 DAKMTK 376
>09_01_0037 - 604001-604957
Length = 318
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 192 KRTQKDGHSARLTAENRNTASPSRESDAMQSPQPSGIPAVP 314
KRT DGH +A + S S SD+ PS +P+ P
Sbjct: 130 KRTTSDGHPTLSSAAAPGSPSGSDLSDSSHHSLPSQMPSSP 170
>05_01_0048 +
331155-333077,333208-333354,333540-334087,334481-334616
Length = 917
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 472 DFLCCPKFKGSHCCFVIVTSDVYILGDG 389
DF+ C +F H C V T ++Y GDG
Sbjct: 132 DFVACGEF---HTCAVTTTGELYTWGDG 156
>02_05_1329 - 35724567-35725255,35725626-35725682,35727667-35729050
Length = 709
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +3
Query: 177 TT*RSKRTQKDGHSARLTAENRNTASPSRESDAMQSPQPSGIP 305
TT R ++ + +++ N + SP+R SDA+Q G+P
Sbjct: 657 TTPEVLRMVREARAEAMSSSNSSDRSPARWSDAVQVQMGMGVP 699
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,601,795
Number of Sequences: 37544
Number of extensions: 355715
Number of successful extensions: 1312
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1309
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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