Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS31019
(784 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 111 8e-26
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 62 1e-10
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 51 2e-07
SPBC215.01 ||SPBC3B9.20|GTPase activating protein|Schizosaccharo... 37 0.004
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 35 0.015
SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Ma... 33 0.061
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 32 0.081
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 29 0.99
SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccha... 27 3.0
SPAC1687.14c |||EF hand family protein, unknown role|Schizosacch... 27 3.0
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 27 3.0
SPAC5H10.13c |gmh2||alpha-1,2-galactosyltransferase Gmh2 |Schizo... 26 5.3
SPCC18.04 |pof6||F-box protein Pof6|Schizosaccharomyces pombe|ch... 26 7.0
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 26 7.0
SPAC5D6.07c |||PXA domain protein|Schizosaccharomyces pombe|chr ... 26 7.0
SPCC132.04c |||NAD-dependent glutamate dehydrogenase |Schizosacc... 25 9.3
SPAC1142.03c |swi2|SPAC17G6.20c|Swi5 complex subunit Swi2|Schizo... 25 9.3
SPAC20H4.07 |rhp57||RecA family ATPase Rhp57|Schizosaccharomyces... 25 9.3
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 111 bits (268), Expect = 8e-26
Identities = 51/110 (46%), Positives = 69/110 (62%)
Frame = +1
Query: 256 MSLPELQQNPLVQRVIDIFDADGNGEVDFKEFIQGVSQFSVKGDKLSKLRFAFRIYDMDN 435
+S+P + NPL R+ + D DG G+VDF+EFI +S FSV G+K KL+FAF+IYD+D
Sbjct: 47 LSIPSVASNPLASRLFSVVDEDGGGDVDFQEFINSLSVFSVHGNKEEKLKFAFKIYDIDR 106
Query: 436 DGFISNGELFQVLKMMVGNNLKDTXXXXXXXXXYFSPTRTKTGKYHSRSF 585
DG+ISNGEL+ VLKMMVG NL++ + + GK F
Sbjct: 107 DGYISNGELYLVLKMMVGTNLREDQLQQIVDKTIMEVDKDRDGKISFEEF 156
Score = 54.4 bits (125), Expect = 2e-08
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = +3
Query: 510 LQQIVDKTILFADKDEDGKISFEEFCNVVGNTDIHKKMVVD 632
LQQIVDKTI+ DKD DGKISFEEF ++V +++ M +D
Sbjct: 132 LQQIVDKTIMEVDKDRDGKISFEEFKDIVSGSNVTSSMTLD 172
Score = 31.1 bits (67), Expect = 0.19
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 164 SNFDADEIRRLGKRFRKLDLDNSGALSIDE 253
S+F +EI R+ KRF K+D + SG++ +E
Sbjct: 16 SSFSNEEIERIRKRFIKIDANQSGSIDRNE 45
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 61.7 bits (143), Expect = 1e-10
Identities = 32/71 (45%), Positives = 49/71 (69%), Gaps = 3/71 (4%)
Frame = +1
Query: 298 VIDIFDADGNGEVDFKEFIQGVSQFSVKGDKLSKLRFAFRIYDMDNDGFISNGELFQV-- 471
V ++FDAD NG +DFKEFI +S S +G+ KL +AF++YD+DN+G IS E+ ++
Sbjct: 68 VFNVFDADKNGYIDFKEFICALSVTS-RGELNDKLIWAFQLYDLDNNGLISYDEMLRIVD 126
Query: 472 -LKMMVGNNLK 501
+ MVG+ +K
Sbjct: 127 AIYKMVGSMVK 137
Score = 31.1 bits (67), Expect = 0.19
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +1
Query: 325 NGEVDFKEFIQGVSQFSVKGDKLSKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKD 504
+G ++ EF + QF GD + + F ++D D +G+I E L + L D
Sbjct: 40 SGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELND 99
Score = 28.7 bits (61), Expect = 0.99
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 507 TLQQIVDKTILFADKDEDGKISFEEFC 587
T ++ V+K DK++DG+++ EEFC
Sbjct: 144 TPEKRVNKIFNMMDKNKDGQLTLEEFC 170
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 51.2 bits (117), Expect = 2e-07
Identities = 24/62 (38%), Positives = 40/62 (64%)
Frame = +1
Query: 289 VQRVIDIFDADGNGEVDFKEFIQGVSQFSVKGDKLSKLRFAFRIYDMDNDGFISNGELFQ 468
+Q +I+ DADGNG +DF EF+ +++ D ++R AF+++D D +G+I+ EL
Sbjct: 50 LQDMINEVDADGNGTIDFTEFLTMMARKMKDTDNEEEVREAFKVFDKDGNGYITVEELTH 109
Query: 469 VL 474
VL
Sbjct: 110 VL 111
>SPBC215.01 ||SPBC3B9.20|GTPase activating
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 36.7 bits (81), Expect = 0.004
Identities = 13/54 (24%), Positives = 29/54 (53%)
Frame = +1
Query: 310 FDADGNGEVDFKEFIQGVSQFSVKGDKLSKLRFAFRIYDMDNDGFISNGELFQV 471
FD G + ++ + G+++ + D + + F F +YD + DGF+ ++ +V
Sbjct: 588 FDKSMTGSLSLQDLVSGIAELKFR-DVMRNISFIFELYDFNGDGFMDKPDVLKV 640
>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 141
Score = 34.7 bits (76), Expect = 0.015
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Frame = +1
Query: 277 QNPLVQRVIDIFDADGNGEVDFKEFIQGVSQ---FSVKGDKLSKLRFAFRIYDMDNDGFI 447
QNP + + +I ++ EVD ++F+Q +++ F + GD ++ F+++D D G I
Sbjct: 37 QNPTLAEITEI-ESTLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVK-GFQVFDKDATGMI 94
Query: 448 SNGELFQVL 474
GEL VL
Sbjct: 95 GVGELRYVL 103
>SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 358
Score = 32.7 bits (71), Expect = 0.061
Identities = 21/73 (28%), Positives = 38/73 (52%)
Frame = -3
Query: 503 SFRLLPTIILST*NNSPLDMNPSLSMSYMRKANRNLDSLSPFTLN*DTPWMNSLKSTSPF 324
S +L +ST +++P+ + S S + +N + + SP TP +S+ S S
Sbjct: 82 SSSILSNSTISTSSSTPITASVPTSSSIL--SNSTIPTTSPVPTTSSTPTSSSILSNSTI 139
Query: 323 PSASNISMTRWTS 285
PS+S+IS + T+
Sbjct: 140 PSSSSISASTITT 152
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 32.3 bits (70), Expect = 0.081
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +1
Query: 334 VDFKEFIQGVSQFSVKGDKLSKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKD 504
+D K+F+ VS + + + AFR++D DN G+I + +K + G L D
Sbjct: 58 IDEKKFMSFVSNKLRETESEEEYIKAFRVFDKDNSGYIETAKFADYMKTL-GEKLSD 113
Score = 28.7 bits (61), Expect = 0.99
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +1
Query: 385 DKLSKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKD 504
++ +++ AF +YD+D DG I + VL+ + G N+ D
Sbjct: 6 EQTDEMKEAFVLYDIDKDGLIPTSHVGSVLRSL-GINVTD 44
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 28.7 bits (61), Expect = 0.99
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 516 QIVDKTILFADKDEDGKISFEEFCNVV 596
+ +++T AD D GK+SFEEF + V
Sbjct: 333 EFLEETFQKADADHSGKLSFEEFQHFV 359
>SPAC23E2.03c |ste7||meiotic suppressor protein
Ste7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 27.1 bits (57), Expect = 3.0
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -2
Query: 261 RHDSSMDSAPELSKSSFRKRLPRRRISSASKFEHSSMGIEFSLPI 127
+++SSM +AP S SS +PRR+ S +S + I S PI
Sbjct: 231 QYNSSM-TAPSSSSSSVAPFVPRRQFSVSSASDPPQTPISMSPPI 274
>SPAC1687.14c |||EF hand family protein, unknown
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 76
Score = 27.1 bits (57), Expect = 3.0
Identities = 15/72 (20%), Positives = 33/72 (45%)
Frame = +1
Query: 256 MSLPELQQNPLVQRVIDIFDADGNGEVDFKEFIQGVSQFSVKGDKLSKLRFAFRIYDMDN 435
+S L+ + + D+FD G +DF++ + +Q G+ L+K + +
Sbjct: 3 VSTKRLEMDEEAEEAFDLFDVTHKGYIDFEDLRRSCAQL---GENLTKEQLQLMLDLAGT 59
Query: 436 DGFISNGELFQV 471
+G +S E ++
Sbjct: 60 NGKVSREEFAEL 71
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 27.1 bits (57), Expect = 3.0
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = -3
Query: 464 NNSPLDMNPSLSMSYMRKANRNLDSLSPFTLN*DTPWMNS--LKSTSPFPSASNI-SMTR 294
++ P D S+S + N + SP +N TP +S L S++P S+S + + T
Sbjct: 348 SSKPTDTTNSISFANTTPENTSTQITSPTAVNSSTPITSSSVLNSSTPITSSSILNTSTP 407
Query: 293 WTSGFCCSSGRDMT 252
TS +S +T
Sbjct: 408 ITSSSVLNSSTPIT 421
>SPAC5H10.13c |gmh2||alpha-1,2-galactosyltransferase Gmh2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 346
Score = 26.2 bits (55), Expect = 5.3
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
Frame = +1
Query: 268 ELQQNPLVQRVIDIFDADG-----NGEVDFKEFIQGVSQFSVK 381
E QQNP Q ++ + +DG NG F+E IQ +S K
Sbjct: 91 EPQQNPASQNIVLLLVSDGHTSYNNGANTFEEAIQNRVDYSTK 133
>SPCC18.04 |pof6||F-box protein Pof6|Schizosaccharomyces pombe|chr
3|||Manual
Length = 872
Score = 25.8 bits (54), Expect = 7.0
Identities = 11/50 (22%), Positives = 24/50 (48%)
Frame = +1
Query: 586 AMWLATLTFIRKWSLTFKRHTYYLSRSS*NTIQIFPLAARGFIFKKSAKR 735
++++ L + W +T R YY S+ + + ++GF + S K+
Sbjct: 68 SIYVKKLLLMNAWDVTLSRKLYYESQDGMSQANMSSNTSKGFHLQSSDKK 117
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 25.8 bits (54), Expect = 7.0
Identities = 12/67 (17%), Positives = 28/67 (41%)
Frame = +1
Query: 274 QQNPLVQRVIDIFDADGNGEVDFKEFIQGVSQFSVKGDKLSKLRFAFRIYDMDNDGFISN 453
+Q + +FD+D + +D+ E + +K L+ R +D G++
Sbjct: 34 EQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKI-LRDFDKTGKGYLQM 92
Query: 454 GELFQVL 474
+ +V+
Sbjct: 93 EDFVRVM 99
Score = 25.4 bits (53), Expect = 9.3
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 211 ETGLGQFRGAVHR*VMSLPELQQNPLVQRVIDIFDADGNGEVDFKEFI 354
ETG R + R L E + ++ +I+ FD D +GE++ +EFI
Sbjct: 123 ETGKISLRN-LRRVAKELNENIDDQELEAMIEEFDLDQDGEINEQEFI 169
>SPAC5D6.07c |||PXA domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 495
Score = 25.8 bits (54), Expect = 7.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 541 SPTRTKTGKYHSRSFAMWLAT 603
SPT+ T K H RSF++ AT
Sbjct: 405 SPTKANTNKSHQRSFSIPKAT 425
>SPCC132.04c |||NAD-dependent glutamate dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1106
Score = 25.4 bits (53), Expect = 9.3
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -1
Query: 127 SKVLLHHTQSEINVRLTVCNHKLIPIKL 44
+K + H+++ LTV NH+ IP K+
Sbjct: 4 TKQIPHYSRIHTTQLLTVVNHRTIPFKI 31
>SPAC1142.03c |swi2|SPAC17G6.20c|Swi5 complex subunit
Swi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 722
Score = 25.4 bits (53), Expect = 9.3
Identities = 22/62 (35%), Positives = 33/62 (53%)
Frame = -3
Query: 479 ILST*NNSPLDMNPSLSMSYMRKANRNLDSLSPFTLN*DTPWMNSLKSTSPFPSASNISM 300
ILS NN+P N LS S + NR+L SL T++ P +N T PF + + +S+
Sbjct: 508 ILSNENNTPNYSNVCLSTSLI---NRSLPSLKS-TMH---PGVNKDLITRPFKNVNKMSV 560
Query: 299 TR 294
+
Sbjct: 561 RK 562
>SPAC20H4.07 |rhp57||RecA family ATPase Rhp57|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 25.4 bits (53), Expect = 9.3
Identities = 10/40 (25%), Positives = 21/40 (52%)
Frame = -3
Query: 404 RNLDSLSPFTLN*DTPWMNSLKSTSPFPSASNISMTRWTS 285
R+ D++ F+L+ + W + T P P ++ + WT+
Sbjct: 268 RDYDAIGLFSLDYQSQWFSGWDDTDPNPKIPSLGLV-WTN 306
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,295,777
Number of Sequences: 5004
Number of extensions: 69890
Number of successful extensions: 205
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 203
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 379359666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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