Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS31017
         (797 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p pro...   144   2e-34
AF080130-1|AAD19340.1|  269|Drosophila melanogaster ribosomal pr...   144   2e-34
AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA ...   144   2e-34
DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosom...   143   3e-34
BT021430-1|AAX33578.1|  290|Drosophila melanogaster GM06171p pro...    38   0.021
BT003457-1|AAO39460.1|  985|Drosophila melanogaster RH34107p pro...    31   2.4  
AE014297-1126|AAF54512.1|  985|Drosophila melanogaster CG3999-PA...    31   2.4  

>BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p
           protein.
          Length = 269

 Score =  144 bits (348), Expect = 2e-34
 Identities = 69/104 (66%), Positives = 82/104 (78%), Gaps = 6/104 (5%)
 Frame = +2

Query: 494 FPQTQTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSAN 673
           F +  T + PR PKYPRKS+P RNRMDAYNIIK+PLT+EAAMKKIEDNNTLVF+ H  AN
Sbjct: 159 FRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYPLTTEAAMKKIEDNNTLVFLTHLRAN 218

Query: 674 KHHIKAAVKKLYDINVAKVNTFSGPDGKKK------RTYDSLEI 787
           K+H++AAV+KLYDI VAKVN    PDG+KK      R YD+L+I
Sbjct: 219 KNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRLARDYDALDI 262



 Score = 46.4 bits (105), Expect = 5e-05
 Identities = 20/34 (58%), Positives = 24/34 (70%)
 Frame = +3

Query: 420 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKRLNL 521
           A K Q+K++KG  G R RKIR +VHFRRP  L L
Sbjct: 134 AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKL 167


>AF080130-1|AAD19340.1|  269|Drosophila melanogaster ribosomal
           protein L23a protein.
          Length = 269

 Score =  144 bits (348), Expect = 2e-34
 Identities = 69/104 (66%), Positives = 82/104 (78%), Gaps = 6/104 (5%)
 Frame = +2

Query: 494 FPQTQTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSAN 673
           F +  T + PR PKYPRKS+P RNRMDAYNIIK+PLT+EAAMKKIEDNNTLVF+ H  AN
Sbjct: 159 FRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYPLTTEAAMKKIEDNNTLVFLTHLRAN 218

Query: 674 KHHIKAAVKKLYDINVAKVNTFSGPDGKKK------RTYDSLEI 787
           K+H++AAV+KLYDI VAKVN    PDG+KK      R YD+L+I
Sbjct: 219 KNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRLARDYDALDI 262



 Score = 39.9 bits (89), Expect = 0.004
 Identities = 19/34 (55%), Positives = 23/34 (67%)
 Frame = +3

Query: 420 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKRLNL 521
           A K Q+K++K   G R RKIR +VHFRRP  L L
Sbjct: 135 AKKVQKKIIKA-FGTRARKIRTNVHFRRPTTLKL 167


>AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA
           protein.
          Length = 277

 Score =  144 bits (348), Expect = 2e-34
 Identities = 69/104 (66%), Positives = 82/104 (78%), Gaps = 6/104 (5%)
 Frame = +2

Query: 494 FPQTQTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSAN 673
           F +  T + PR PKYPRKS+P RNRMDAYNIIK+PLT+EAAMKKIEDNNTLVF+ H  AN
Sbjct: 167 FRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYPLTTEAAMKKIEDNNTLVFLTHLRAN 226

Query: 674 KHHIKAAVKKLYDINVAKVNTFSGPDGKKK------RTYDSLEI 787
           K+H++AAV+KLYDI VAKVN    PDG+KK      R YD+L+I
Sbjct: 227 KNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRLARDYDALDI 270



 Score = 46.4 bits (105), Expect = 5e-05
 Identities = 20/34 (58%), Positives = 24/34 (70%)
 Frame = +3

Query: 420 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKRLNL 521
           A K Q+K++KG  G R RKIR +VHFRRP  L L
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKL 175


>DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosomal
           protein naturalvariant protein.
          Length = 277

 Score =  143 bits (346), Expect = 3e-34
 Identities = 69/104 (66%), Positives = 81/104 (77%), Gaps = 6/104 (5%)
 Frame = +2

Query: 494 FPQTQTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSAN 673
           F +  T + PR PKYPRKS+P RNRMDAYNIIK+PLT+EAAMKKIEDNNTLVF+ H  AN
Sbjct: 167 FRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYPLTTEAAMKKIEDNNTLVFLTHLRAN 226

Query: 674 KHHIKAAVKKLYDINVAKVNTFSGPDGKKK------RTYDSLEI 787
           K H++AAV+KLYDI VAKVN    PDG+KK      R YD+L+I
Sbjct: 227 KSHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRLARDYDALDI 270



 Score = 45.6 bits (103), Expect = 8e-05
 Identities = 20/34 (58%), Positives = 24/34 (70%)
 Frame = +3

Query: 420 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKRLNL 521
           A K Q+K++KG  G R RKIR +VHFRRP  L L
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRANVHFRRPTTLKL 175


>BT021430-1|AAX33578.1|  290|Drosophila melanogaster GM06171p
           protein.
          Length = 290

 Score = 37.5 bits (83), Expect = 0.021
 Identities = 24/76 (31%), Positives = 39/76 (51%)
 Frame = +1

Query: 535 IPKEVSA*EKSHGCLQHH*IPSHV*SSNEED*R*QHLGLYCSHKCKQAPYQGCSQETL*Y 714
           +P+E+ A ++ HG +QHH +P+     +EED   QH GL  +   +Q P    S + L +
Sbjct: 163 VPQEIGAHQEPHGRVQHHQVPTDHRGGHEEDRGQQHPGLPHTPARQQEPRACRSAQALRH 222

Query: 715 KCC*SQHILRA*W*EE 762
           +    +    A W EE
Sbjct: 223 QGGQGERAHPARWPEE 238


>BT003457-1|AAO39460.1|  985|Drosophila melanogaster RH34107p
           protein.
          Length = 985

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 458 MFTFYNLPLSLKCFSNRFHYFFLSLNPSLFG 366
           M+  Y+ P  LK  +NR H+F L+L   + G
Sbjct: 368 MYAIYHGPEGLKAMANRIHHFTLTLQTGVLG 398


>AE014297-1126|AAF54512.1|  985|Drosophila melanogaster CG3999-PA
           protein.
          Length = 985

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 458 MFTFYNLPLSLKCFSNRFHYFFLSLNPSLFG 366
           M+  Y+ P  LK  +NR H+F L+L   + G
Sbjct: 368 MYAIYHGPEGLKAMANRIHHFTLTLQTGVLG 398


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,416,805
Number of Sequences: 53049
Number of extensions: 446004
Number of successful extensions: 1211
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1207
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)