Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS31017
(797 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75541-4|CAA99858.1| 146|Caenorhabditis elegans Hypothetical pr... 101 5e-22
U40948-2|AAA81728.1| 147|Caenorhabditis elegans Ribosomal prote... 100 2e-21
Z81064-5|CAB02964.2| 1392|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z54235-7|CAA90974.3| 611|Caenorhabditis elegans Hypothetical pr... 29 2.9
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 29 5.1
L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclas... 29 5.1
AF106591-5|AAK71394.1| 637|Caenorhabditis elegans Hypothetical ... 29 5.1
AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical ... 29 5.1
AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical ... 29 5.1
>Z75541-4|CAA99858.1| 146|Caenorhabditis elegans Hypothetical
protein F52B5.6 protein.
Length = 146
Score = 101 bits (243), Expect = 5e-22
Identities = 50/101 (49%), Positives = 66/101 (65%)
Frame = +2
Query: 494 FPQTQTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSAN 673
F + +T R P+Y RKS P R+++D++ +IK P T+E++MKKIED+NTLVFIV AN
Sbjct: 36 FRRPKTLVTARAPRYARKSAPARDKLDSFAVIKAPHTTESSMKKIEDHNTLVFIVDEKAN 95
Query: 674 KHHIKAAVKKLYDINVAKVNTFSGPDGKKKRTYDSLEIYDA 796
KHHIK AV LY++ KVNT P +KK YDA
Sbjct: 96 KHHIKRAVHALYNVKAVKVNTLITPLQQKKAYVRLASDYDA 136
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +3
Query: 411 VTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKRL 515
V KA++A++ VVKG + +R SVHFRRPK L
Sbjct: 8 VGKAIQAKKAVVKGSKTNVRKNVRTSVHFRRPKTL 42
>U40948-2|AAA81728.1| 147|Caenorhabditis elegans Ribosomal protein,
large subunitprotein 25.1 protein.
Length = 147
Score = 99.5 bits (237), Expect = 2e-21
Identities = 50/101 (49%), Positives = 66/101 (65%)
Frame = +2
Query: 494 FPQTQTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSAN 673
F + T + R ++PRKS PK ++MD + II+ PLT+E+AMKKIE++NTLVFIV AN
Sbjct: 37 FRRPVTLKTARQARFPRKSAPKTSKMDHFRIIQHPLTTESAMKKIEEHNTLVFIVSNDAN 96
Query: 674 KHHIKAAVKKLYDINVAKVNTFSGPDGKKKRTYDSLEIYDA 796
K+ IK AV KLY++ KVNT P +KK YDA
Sbjct: 97 KYQIKDAVHKLYNVQALKVNTLITPLQQKKAYVRLTADYDA 137
Score = 41.1 bits (92), Expect = 9e-04
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +3
Query: 417 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKRL 515
KAL A++KVVKG+ R++R SVHFRRP L
Sbjct: 11 KALDAKKKVVKGKRTTHRRQVRTSVHFRRPVTL 43
>Z81064-5|CAB02964.2| 1392|Caenorhabditis elegans Hypothetical
protein F16B12.6 protein.
Length = 1392
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/84 (26%), Positives = 36/84 (42%)
Frame = +2
Query: 455 TWEESTENSQLCAFPQTQTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIED 634
++ ES E+ + F E RHP R+ P+R + +K LT A+ +
Sbjct: 177 SYRESDEDYSVNDFAHPPDLE--RHPLSKRRGRPRRPQEQLETNVKLKLTRPASKAQRAP 234
Query: 635 NNTLVFIVHTSANKHHIKAAVKKL 706
V +AN+ HIK ++L
Sbjct: 235 PTEPVAARTATANQRHIKLFEEEL 258
>Z54235-7|CAA90974.3| 611|Caenorhabditis elegans Hypothetical
protein C09G9.4 protein.
Length = 611
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +2
Query: 587 IKFPLTSEAAMKKIEDNNTLVF--IVHTSANKHHIKAAVKKLYDINVAKVNTFSGPDGKK 760
+K P +E + ++D +V I HT ++H K A K L D+ + ++ G D
Sbjct: 155 VKVPEKAEELTEILKDLKEIVIPNICHTHHPRYHAKFAGKSLADLVASTISAALGHDVNS 214
Query: 761 KRTYDSLE 784
+S+E
Sbjct: 215 SPIIESIE 222
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
C41A3.1 protein.
Length = 7829
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -1
Query: 470 YSLPMFTFYNLPLSLKCFSNRFHYFF 393
+S + FYNL L KCFS FH+ F
Sbjct: 3293 FSKKVTFFYNL-LQSKCFSKHFHWLF 3317
>L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclase
protein.
Length = 1276
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +2
Query: 542 RKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKL 706
+KSL +NR ++ ++ F S +++ I NNT ++ T+ K + A+KKL
Sbjct: 706 KKSLSLKNRKLSFGMVSFKSGSGGSVETIAQNNTQIY-TKTAIFK-GVVVAIKKL 758
>AF106591-5|AAK71394.1| 637|Caenorhabditis elegans Hypothetical
protein T01A4.1b protein.
Length = 637
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +2
Query: 542 RKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKL 706
+KSL +NR ++ ++ F S +++ I NNT ++ T+ K + A+KKL
Sbjct: 79 KKSLSLKNRKLSFGMVSFKSGSGGSVETIAQNNTQIY-TKTAIFK-GVVVAIKKL 131
>AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical
protein T01A4.1a protein.
Length = 1217
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +2
Query: 542 RKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKL 706
+KSL +NR ++ ++ F S +++ I NNT ++ T+ K + A+KKL
Sbjct: 647 KKSLSLKNRKLSFGMVSFKSGSGGSVETIAQNNTQIY-TKTAIFK-GVVVAIKKL 699
>AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical
protein T01A4.1c protein.
Length = 1276
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +2
Query: 542 RKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKL 706
+KSL +NR ++ ++ F S +++ I NNT ++ T+ K + A+KKL
Sbjct: 706 KKSLSLKNRKLSFGMVSFKSGSGGSVETIAQNNTQIY-TKTAIFK-GVVVAIKKL 758
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,103,130
Number of Sequences: 27780
Number of extensions: 233778
Number of successful extensions: 804
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 804
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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