Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS31011
(575 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 138 7e-34
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 101 6e-23
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 99 5e-22
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 83 4e-17
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 80 3e-16
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 79 5e-16
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 76 3e-15
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 74 2e-14
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 57 2e-09
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 56 3e-09
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 56 5e-09
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 52 6e-08
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 50 2e-07
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 50 3e-07
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 49 4e-07
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 49 4e-07
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 44 2e-05
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 41 1e-04
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 33 0.023
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 31 0.16
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 29 0.37
SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr 2... 29 0.64
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 27 1.5
SPBC354.01 |gtp1|SPBC649.06|GTP binding protein Gtp1|Schizosacch... 27 2.0
SPBC1215.01 |shy1||SURF-family protein Shy1|Schizosaccharomyces ... 26 3.4
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 26 4.5
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 26 4.5
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 25 7.9
SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolo... 25 7.9
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 138 bits (333), Expect = 7e-34
Identities = 65/75 (86%), Positives = 70/75 (93%)
Frame = +3
Query: 15 REDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQ 194
+EDEYDYLFK VLIGDSGVGKS+LL RFTRNEFN+ESKSTIGVEFATR+I +D K IKAQ
Sbjct: 3 QEDEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQ 62
Query: 195 IWDTAGQERYRAITS 239
IWDTAGQERYRAITS
Sbjct: 63 IWDTAGQERYRAITS 77
Score = 126 bits (305), Expect = 2e-30
Identities = 58/85 (68%), Positives = 72/85 (84%)
Frame = +1
Query: 253 AVGAXLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFA 432
AVGA +VYDI K S++NV RWL+ELR+HAD NI+IMLVGNK+DL HLR++ TEEA+AFA
Sbjct: 83 AVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFA 142
Query: 433 EANGLSFIETSALDSTNVEPAFQXI 507
N LSFIETSA+D++NVE AFQ +
Sbjct: 143 AENNLSFIETSAMDASNVEEAFQTV 167
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 101 bits (243), Expect = 6e-23
Identities = 47/72 (65%), Positives = 57/72 (79%)
Frame = +3
Query: 24 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 203
EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F R+ E++GKT+K QIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWD 63
Query: 204 TAGQERYRAITS 239
TAGQER+R ITS
Sbjct: 64 TAGQERFRTITS 75
Score = 74.5 bits (175), Expect = 1e-14
Identities = 36/82 (43%), Positives = 54/82 (65%)
Frame = +1
Query: 253 AVGAXLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFA 432
A G +VYD+ S+ NV++WL+E+ +A + + +LVGNKSD+ + + AK FA
Sbjct: 81 AHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDKKVVEYSVAKEFA 140
Query: 433 EANGLSFIETSALDSTNVEPAF 498
++ + F+ETSA DSTNVE AF
Sbjct: 141 DSLNIPFLETSAKDSTNVEQAF 162
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 98.7 bits (235), Expect = 5e-22
Identities = 45/71 (63%), Positives = 56/71 (78%)
Frame = +3
Query: 27 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDT 206
YDYL K++LIGDSGVGKS LL RF+ + F +TIG++F R+IE+DGK IK QIWDT
Sbjct: 6 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDT 65
Query: 207 AGQERYRAITS 239
AGQER+R IT+
Sbjct: 66 AGQERFRTITT 76
Score = 70.9 bits (166), Expect = 1e-13
Identities = 30/82 (36%), Positives = 48/82 (58%)
Frame = +1
Query: 253 AVGAXLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFA 432
A+G L+YD+ S++NV W + HA +N+ +L+GNK D R + E+ +A A
Sbjct: 82 AMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQRQVSFEQGQALA 141
Query: 433 EANGLSFIETSALDSTNVEPAF 498
+ G+ F+E SA + NV+ AF
Sbjct: 142 DELGVKFLEASAKTNVNVDEAF 163
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 82.6 bits (195), Expect = 4e-17
Identities = 38/76 (50%), Positives = 54/76 (71%), Gaps = 4/76 (5%)
Frame = +3
Query: 18 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEV----DGKTI 185
++ YDYL K+VL G SG GKS LL RF +N+++ + T+G++FA+R I V K I
Sbjct: 3 KESYDYLVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRI 62
Query: 186 KAQIWDTAGQERYRAI 233
K QIWDTAGQE++R++
Sbjct: 63 KLQIWDTAGQEKFRSV 78
Score = 67.3 bits (157), Expect = 2e-12
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Frame = +1
Query: 232 SRRRTTAAVGAXLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPT 411
+R A GA LVYD+ S+E + WL ++R A I ++L G+KSDL++ R + T
Sbjct: 79 ARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVLAGSKSDLQNQRQVST 138
Query: 412 EEAKAFAEANGLSFI-ETSALDSTNVEPAF 498
EEA F +S ETS+ +NVE F
Sbjct: 139 EEAAEFCSEKHISSAHETSSYTGSNVEECF 168
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 79.8 bits (188), Expect = 3e-16
Identities = 32/64 (50%), Positives = 50/64 (78%)
Frame = +3
Query: 42 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 221
KVV++GDSGVGK+ L+++F +F+ E K+TIG +F T+ + VD K + Q+WDTAGQER
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69
Query: 222 YRAI 233
++++
Sbjct: 70 FQSL 73
Score = 32.3 bits (70), Expect = 0.052
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Frame = +1
Query: 268 LVYDIAKHLSYENVERWLRELRDHADQN---ILIMLVGNKSDL-RHLRSIPTEEAKAFAE 435
+VY++ S+++VE W +E Q+ ++VGN+ D R++ A + +
Sbjct: 86 IVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQIDKDASKRAVSLHRALDYCK 145
Query: 436 A-NGLSFI--ETSALDSTNVEPAFQXI 507
+ +G + I E SA ++TNV F+ +
Sbjct: 146 SKHGSNMIHFEASAKENTNVTDLFETV 172
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 79.0 bits (186), Expect = 5e-16
Identities = 29/67 (43%), Positives = 53/67 (79%)
Frame = +3
Query: 33 YLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAG 212
+L KV+++G+SGVGK+S+++++ +F+ + K+TIG +F T+ + VD K + Q+WDTAG
Sbjct: 7 HLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAG 66
Query: 213 QERYRAI 233
QER++++
Sbjct: 67 QERFQSL 73
Score = 47.2 bits (107), Expect = 2e-06
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Frame = +1
Query: 268 LVYDIAKHLSYENVERWLRELRDHAD----QNILIMLVGNKSDLRHL-RSIPTEEAKAFA 432
LVYD+ S+E ++ W E A + +L+GNK D+ R + +A AF
Sbjct: 86 LVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNKVDVEEQKRMVSKSKALAFC 145
Query: 433 EANG-LSFIETSALDSTNVEPAFQXI 507
+A G + + ETSA ++ NV+ AF+ +
Sbjct: 146 QARGEIPYFETSAKEAINVQEAFETV 171
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 76.2 bits (179), Expect = 3e-15
Identities = 34/65 (52%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Frame = +3
Query: 42 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT-IKAQIWDTAGQE 218
K+VL+GDS VGKSSL+ RF +++F+ +STIG F T+++ +D T +K +IWDTAGQE
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
Query: 219 RYRAI 233
RY+++
Sbjct: 76 RYKSL 80
Score = 61.7 bits (143), Expect = 7e-11
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +1
Query: 262 AXLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDL-RHLRSIPTEEAKAFAEA 438
A +VYDI + S E + W++EL+ A + I+I L GNK DL + R++ +A+A+A
Sbjct: 91 AIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQERRAVEKADAEAYAAE 150
Query: 439 NGLSFIETSALDSTNVEPAFQXI 507
L F ETSA + NV F I
Sbjct: 151 ANLLFFETSAKTAENVNELFTAI 173
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 73.7 bits (173), Expect = 2e-14
Identities = 27/65 (41%), Positives = 53/65 (81%)
Frame = +3
Query: 39 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQE 218
FK+V +G+ VGK+SL++RF ++F+ ++TIG++F ++++ ++ +T++ Q+WDTAGQE
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 71
Query: 219 RYRAI 233
R+R++
Sbjct: 72 RFRSL 76
Score = 64.9 bits (151), Expect = 8e-12
Identities = 31/82 (37%), Positives = 49/82 (59%)
Frame = +1
Query: 262 AXLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEAN 441
A +VYDI H S+ N E+W+ ++R +++I+LVGNK+DL R + EE + A+
Sbjct: 87 AIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTDLADKRQVTQEEGEKKAKEL 146
Query: 442 GLSFIETSALDSTNVEPAFQXI 507
+ +ETSA NV+ F+ I
Sbjct: 147 KIMHMETSAKAGHNVKLLFRKI 168
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 56.8 bits (131), Expect = 2e-09
Identities = 27/64 (42%), Positives = 39/64 (60%)
Frame = +3
Query: 42 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 221
K+V++GD GK+SLLS FT F E T+ + + VDGK+++ +WDTAGQE
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVS-DCRVDGKSVQLALWDTAGQEE 68
Query: 222 YRAI 233
Y +
Sbjct: 69 YERL 72
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 56.4 bits (130), Expect = 3e-09
Identities = 29/66 (43%), Positives = 40/66 (60%)
Frame = +3
Query: 42 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 221
K+V++GD GK+SLL+ FT+ F + TI E I VDG +I+ +WDTAGQE
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTI-FENYIHDIFVDGNSIELSLWDTAGQEE 73
Query: 222 YRAITS 239
Y + S
Sbjct: 74 YDQLRS 79
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 55.6 bits (128), Expect = 5e-09
Identities = 24/61 (39%), Positives = 36/61 (59%)
Frame = +3
Query: 42 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 221
KV +IGDS +GK+SL+ + + F+ ES T+GV F ++I + I IWD GQ
Sbjct: 12 KVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQRE 71
Query: 222 Y 224
+
Sbjct: 72 F 72
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 52.0 bits (119), Expect = 6e-08
Identities = 24/61 (39%), Positives = 35/61 (57%)
Frame = +3
Query: 39 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQE 218
FK+VL+GD G GK++ + R EF + +T+GVE + I +WDTAGQE
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQE 69
Query: 219 R 221
+
Sbjct: 70 K 70
Score = 42.3 bits (95), Expect = 5e-05
Identities = 24/77 (31%), Positives = 41/77 (53%)
Frame = +1
Query: 268 LVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGL 447
+++D+ ++Y+NV W R+L +NI I+L GNK D++ R + +A F L
Sbjct: 87 IMFDVTSRITYKNVPHWWRDL-VRVCENIPIVLCGNKVDVKE-RKVKA-KAITFHRKKNL 143
Query: 448 SFIETSALDSTNVEPAF 498
+ + SA + N E F
Sbjct: 144 QYYDISAKSNYNFEKPF 160
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 50.0 bits (114), Expect = 2e-07
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 GAXLVYDIAKHLSYENVERWLRELRDHADQN-ILIMLVGNKSDLRHLRSIPTEEAKAFAE 435
G LVY I S+E V+ ++ +H + I++VGNKSDL R++ EE KA A
Sbjct: 80 GYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLHMQRAVTAEEGKALAN 139
Query: 436 ANGLSFIETSALDSTNVEPAFQXI 507
++ E SA + NV AF+ I
Sbjct: 140 EWKCAWTEASARHNENVARAFELI 163
Score = 41.9 bits (94), Expect = 6e-05
Identities = 22/66 (33%), Positives = 36/66 (54%)
Frame = +3
Query: 42 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 221
++ ++G VGKSSL ++ N F TI F+ ++I+ G+ +I DTAGQ+
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFS-KNIKYKGQEFATEIIDTAGQDE 66
Query: 222 YRAITS 239
Y + S
Sbjct: 67 YSILNS 72
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 49.6 bits (113), Expect = 3e-07
Identities = 24/61 (39%), Positives = 36/61 (59%)
Frame = +3
Query: 42 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 221
K+V++GD GK+ LL F++ F T+ + +EVDG+ I+ +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVA-DVEVDGRHIELALWDTAGQED 66
Query: 222 Y 224
Y
Sbjct: 67 Y 67
Score = 28.3 bits (60), Expect = 0.85
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +1
Query: 295 SYENV-ERWLRELRDHADQNILIMLVGNKSDLRH 393
S +NV E+W+ E+ H N+ I+LVG K DLR+
Sbjct: 92 SLDNVQEKWISEVL-HFCSNLPILLVGCKVDLRN 124
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 49.2 bits (112), Expect = 4e-07
Identities = 23/61 (37%), Positives = 36/61 (59%)
Frame = +3
Query: 42 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 221
K+V++GD GK+ LL F++ F T+ + +EVDG+ ++ +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVA-DVEVDGRHVELALWDTAGQED 66
Query: 222 Y 224
Y
Sbjct: 67 Y 67
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 49.2 bits (112), Expect = 4e-07
Identities = 25/65 (38%), Positives = 39/65 (60%)
Frame = +3
Query: 39 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQE 218
+K+V++GD GVGKS+L + ++ F E TI + + E+DG+ + DTAGQE
Sbjct: 9 YKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSY-RKKCEIDGEGALLDVLDTAGQE 67
Query: 219 RYRAI 233
Y A+
Sbjct: 68 EYSAM 72
Score = 44.0 bits (99), Expect = 2e-05
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +1
Query: 259 GAXLVYDIAKHLSYENVERWLRELRDHADQNIL-IMLVGNKSDLRHLRSIPTEEAKAFAE 435
G LVY+I S++ + + +++ D++ ++LV NK DL R + E + A+
Sbjct: 82 GFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDLEAERVVSRAEGEQLAK 141
Query: 436 ANGLSFIETSALDSTNVEPAF 498
+ ++ETSA NVE AF
Sbjct: 142 SMHCLYVETSAKLRLNVEEAF 162
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 44.0 bits (99), Expect = 2e-05
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +3
Query: 42 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATR-SIEVDGKTIKAQIWDTAGQE 218
K+V++GD G GK+ LL F+ F T+ + T + + K I+ +WDTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 219 RY 224
Y
Sbjct: 76 EY 77
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 41.1 bits (92), Expect = 1e-04
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = +3
Query: 42 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 221
K V++GD VGK+ LL +T N+F + T+ +A ++ + + ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAV-TVMIGDEPYTLGLFDTAGQED 63
Query: 222 Y 224
Y
Sbjct: 64 Y 64
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 33.5 bits (73), Expect = 0.023
Identities = 17/64 (26%), Positives = 35/64 (54%)
Frame = +3
Query: 42 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 221
+++++G GK+++L + N+ ++ + T+G T V K IK +WD GQ++
Sbjct: 23 RILMLGLDAAGKTTILYKLKLNQ-SVVTIPTVGFNVET----VTYKNIKFNVWDVGGQDK 77
Query: 222 YRAI 233
R +
Sbjct: 78 IRPL 81
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 30.7 bits (66), Expect = 0.16
Identities = 16/64 (25%), Positives = 33/64 (51%)
Frame = +3
Query: 42 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 221
+++++G GK+++L + E + + TIG T V+ + I +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEI-VTTIPTIGFNVET----VEYRNISFTVWDVGGQDK 73
Query: 222 YRAI 233
R +
Sbjct: 74 IRPL 77
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 29.5 bits (63), Expect = 0.37
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 42 KVVLIGDSGVGKSSLLSRFTRNE 110
+VV+ GD GVGKSSL+S + +
Sbjct: 5 RVVICGDQGVGKSSLISALIQED 27
Score = 27.5 bits (58), Expect = 1.5
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +3
Query: 24 EYDY-LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTI--GVEF 149
+YD +F ++G GK++LLS F N N + +T+ VEF
Sbjct: 416 KYDRNVFLCFVVGSKSCGKTALLSSFINNNTNRLTPNTVVNSVEF 460
>SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 202
Score = 28.7 bits (61), Expect = 0.64
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 45 VVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDG 176
VV+ G SGVGKS+LL R ++ + S R+ E DG
Sbjct: 21 VVVFGPSGVGKSTLLKRLLKDHGDKLGFSVSHTTRTPRAGEKDG 64
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 27.5 bits (58), Expect = 1.5
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -2
Query: 145 STPMVDL--DSKLNSFLVKRDRRLLLPTPESPMS 50
ST M DL D +++ FL+ R++ +PT + P S
Sbjct: 219 STGMADLSKDDRISRFLILREQSKQIPTQQKPSS 252
>SPBC354.01 |gtp1|SPBC649.06|GTP binding protein
Gtp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 363
Score = 27.1 bits (57), Expect = 2.0
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = +3
Query: 3 KMGTREDEYDYL----FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEV 170
K G + + +D L +V IG VGKS+LLS T+ + S + +E
Sbjct: 47 KSGPKGEGFDVLKSGDARVAFIGFPSVGKSTLLSAITKTKSATASYEFTTLTAIPGVLEY 106
Query: 171 DGKTIK 188
DG I+
Sbjct: 107 DGAEIQ 112
>SPBC1215.01 |shy1||SURF-family protein Shy1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 290
Score = 26.2 bits (55), Expect = 3.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -3
Query: 363 HDEDVLVGVVAQLAQPPLHVLVRQVLGD 280
HD+++LVG + QP HV+ +L D
Sbjct: 107 HDQEMLVGPRTKEGQPGYHVVTPFILDD 134
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 25.8 bits (54), Expect = 4.5
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 39 FKVVLIGDSGVGKSSLLSR-FTRNEFNLESKSTIG 140
F V+++G+SG GKS+L++ R+ + KS G
Sbjct: 96 FNVLVLGESGSGKSTLVNTLLNRDVYPPTQKSLTG 130
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 25.8 bits (54), Expect = 4.5
Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 45 VVLIGDSGVGKSSLLSRFTR-NEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAG 212
++++G+S +GK++ ++ F + N+ N K T+ ++ + I DT G
Sbjct: 121 LIVVGESSLGKTTFVNSFLQSNDTNFRPKKTMDFVEHKATLSDGDQKFNLTIVDTPG 177
>SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1079
Score = 25.0 bits (52), Expect = 7.9
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1
Query: 575 PDDVTLGRXAXLPLRHXPVD 516
P + LGR A L + H PVD
Sbjct: 987 PQIIELGRVASLEMNHKPVD 1006
>SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolog
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 25.0 bits (52), Expect = 7.9
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +1
Query: 319 LRELRDHADQN---ILIMLVGNKSDLRHLRSIPTEEAKAFAEA 438
+RE+RDHA N +L++L L++ + P E +EA
Sbjct: 52 IREMRDHAFVNLEKLLLVLTSRLFALKNDKKFPNPETAPASEA 94
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,069,038
Number of Sequences: 5004
Number of extensions: 38349
Number of successful extensions: 204
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 193
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 246098644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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