Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS31009
         (747 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    25   1.00 
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              24   1.7  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    24   1.7  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    23   3.0  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   5.3  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   9.3  

>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 24.6 bits (51), Expect = 1.00
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 260 VAGSKTGSGDPDYSPRGGWVW 322
           V  +KTG+G P  +P   W W
Sbjct: 90  VITNKTGNGGPLLAPYPDWTW 110


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +3

Query: 114 NSPAHRAIAKRMEQTENEVRTLQASCKALVEQNIPELKI 230
           N    R IAK +   ENE+  L   C A+ + N+  LKI
Sbjct: 80  NEHVSREIAK-IFLNENEINQLITECSAISDTNV-HLKI 116


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 363 TRHSWMGRDERNTRHTH 313
           T H WM R+  N +H H
Sbjct: 179 TPHGWMRRNVLNKQHVH 195



 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 260 LGDIIFYVIVNFKFRYVL 207
           +G I+FY+I  + FR  L
Sbjct: 341 IGSIVFYIISRYVFRSAL 358


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +3

Query: 147 MEQTENEVRTLQASCKALVEQNI 215
           +E   N ++T  + CK+L+E+ +
Sbjct: 74  IEMDSNPIKTALSVCKSLIERQV 96


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +2

Query: 260 VAGSKTGSGDPDYSPRGGWVW 322
           V  +K G+G P   P   W W
Sbjct: 93  VISNKIGNGGPLLEPYPNWSW 113


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 578 YWDVPITLCRVY 543
           YW+VP  +C  Y
Sbjct: 46  YWNVPTFMCHKY 57


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,927
Number of Sequences: 438
Number of extensions: 4589
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)