Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS31004
         (679 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    25   1.7  
AJ618921-1|CAF02000.1|  172|Anopheles gambiae putative odorant-b...    25   2.2  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   3.8  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   5.1  
AY330178-1|AAQ16284.1|  176|Anopheles gambiae odorant-binding pr...    24   5.1  
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    23   8.9  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   8.9  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   8.9  

>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = -2

Query: 180 RRLHPRSQHLPSPRQSASSSHLVSQTLTGLVHSSVGHDPLLFTSL-HSVVFL 28
           R+LH R QH+   +Q   ++    Q L G+V      +  L   L HS   L
Sbjct: 744 RKLHQRQQHMKKLQQELLTNEQQLQQLAGVVFEGETEETTLREELEHSRTIL 795


>AJ618921-1|CAF02000.1|  172|Anopheles gambiae putative
           odorant-binding protein OBP5479 protein.
          Length = 172

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 44  CRLVNKSGSCPTDEWTSPVSVCETKC 121
           C +V    +CP + W S V +CE KC
Sbjct: 146 CIMVESMRNCPAERWDSSV-LCE-KC 169


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -3

Query: 506 GSFTCRWISCWLMP 465
           G F   W SCWL P
Sbjct: 520 GVFPALWKSCWLFP 533


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -1

Query: 43   FGCVFEELRED 11
            FGC+ E+LRED
Sbjct: 3269 FGCMLEDLRED 3279


>AY330178-1|AAQ16284.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP51 protein.
          Length = 176

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 44  CRLVNKSGSCPTDEWTSPVSVCE 112
           C +V    +CP + W S V +CE
Sbjct: 144 CIMVESMRNCPAERWDSSV-LCE 165


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 572 AVCPSPPLLFVLFSRDADRRP 510
           A C S P  ++L+SRD  R P
Sbjct: 411 AACNSNPKDYLLYSRDPVRTP 431


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -2

Query: 657  LYGTMGPLSPLYQKISGVGYPYTRQRKTSG 568
            LY  +    P YQ+IS +  P T    T+G
Sbjct: 1850 LYQPVRLCGPCYQRISSMTVPATSSVSTTG 1879


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -2

Query: 657  LYGTMGPLSPLYQKISGVGYPYTRQRKTSG 568
            LY  +    P YQ+IS +  P T    T+G
Sbjct: 1851 LYQPVRLCGPCYQRISSMTVPATSSVSTTG 1880


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 689,710
Number of Sequences: 2352
Number of extensions: 14871
Number of successful extensions: 32
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)