Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS31003
(524 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical pr... 88 4e-18
AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein. 88 4e-18
AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin prot... 39 0.002
U64856-6|AAB04989.1| 406|Caenorhabditis elegans Hypothetical pr... 36 0.023
U04712-3|AAA81903.1| 357|Caenorhabditis elegans unc-87 protein. 31 0.50
U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein. 31 0.50
U04712-1|AAA81901.1| 374|Caenorhabditis elegans unc-87 protein. 31 0.50
U04711-2|AAA81900.1| 357|Caenorhabditis elegans unc-87 protein. 31 0.50
U04711-1|AAA81899.1| 374|Caenorhabditis elegans unc-87 protein. 31 0.50
AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated... 31 0.50
AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated... 31 0.50
AF106590-4|AAK68303.1| 374|Caenorhabditis elegans Uncoordinated... 31 0.50
U64856-5|AAT81185.1| 301|Caenorhabditis elegans Hypothetical pr... 31 0.67
U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical pr... 30 0.88
Z82051-6|CAB04821.1| 354|Caenorhabditis elegans Hypothetical pr... 27 6.2
AF016657-1|AAB93653.1| 361|Caenorhabditis elegans Hypothetical ... 27 8.2
>Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical
protein F43G9.9 protein.
Length = 192
Score = 87.8 bits (208), Expect = 4e-18
Identities = 41/73 (56%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Frame = +2
Query: 2 QNLNSVVICLQSLGRKAG-TYGKPSIGPKEAEKNVRNFSEEQLRAGQGVISLQYGSNKGA 178
Q+ N+V+ICL SL RK+ +G+ +GPKEA+ + R +++EQL+AG VI LQ GSNKGA
Sbjct: 120 QDPNAVLICLASLARKSEKNFGRSGLGPKEAQGDRREWTDEQLKAGHNVIGLQMGSNKGA 179
Query: 179 NQSGINFGNTRHM 217
SG+N GNTRHM
Sbjct: 180 TASGLNMGNTRHM 192
>AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein.
Length = 192
Score = 87.8 bits (208), Expect = 4e-18
Identities = 41/73 (56%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Frame = +2
Query: 2 QNLNSVVICLQSLGRKAG-TYGKPSIGPKEAEKNVRNFSEEQLRAGQGVISLQYGSNKGA 178
Q+ N+V+ICL SL RK+ +G+ +GPKEA+ + R +++EQL+AG VI LQ GSNKGA
Sbjct: 120 QDPNAVLICLASLARKSEKNFGRSGLGPKEAQGDRREWTDEQLKAGHNVIGLQMGSNKGA 179
Query: 179 NQSGINFGNTRHM 217
SG+N GNTRHM
Sbjct: 180 TASGLNMGNTRHM 192
>AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin protein
2 protein.
Length = 203
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Frame = +2
Query: 17 VVICLQSLGRKAGTYGK----PSIGPKEAEKNVRNFSEEQLRAGQGVISLQYGSNKGANQ 184
V+ CL+ L A + P+ K A+ + R F E +R G+ VI LQYG+NK A+Q
Sbjct: 126 VIECLRLLAAVAQSRSSHLEHPAWVVKLAQSSPRQFPEAVMRRGEMVIPLQYGTNKCASQ 185
Query: 185 SGIN 196
G++
Sbjct: 186 KGMS 189
>U64856-6|AAB04989.1| 406|Caenorhabditis elegans Hypothetical
protein T25F10.6a protein.
Length = 406
Score = 35.5 bits (78), Expect = 0.023
Identities = 28/67 (41%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +2
Query: 20 VICLQSLGRK-AGTYGKPSIGPKEAEKNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI- 193
++ LQS K A G IG +VR + +Q R QG I LQ G+NK ANQ+G+
Sbjct: 200 IVPLQSGTNKLASQAGMTGIGMPRIV-DVRR-TNDQDRDSQGFIHLQMGTNKFANQAGMT 257
Query: 194 NFGNTRH 214
FG RH
Sbjct: 258 GFGMPRH 264
Score = 31.9 bits (69), Expect = 0.29
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +2
Query: 116 EEQLRAGQGVISLQYGSNKGANQSGI 193
EE+ RA G++ LQ G+NK A+Q+G+
Sbjct: 191 EEKARASDGIVPLQSGTNKLASQAGM 216
Score = 30.7 bits (66), Expect = 0.67
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +2
Query: 113 SEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 211
++E+L +G+I +Q GSNK A+Q G+ FG R
Sbjct: 92 TKEKLMRSEGIIPIQAGSNKYASQKGMTGFGVPR 125
>U04712-3|AAA81903.1| 357|Caenorhabditis elegans unc-87 protein.
Length = 357
Score = 31.1 bits (67), Expect = 0.50
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 116 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 211
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 120 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 152
Score = 30.7 bits (66), Expect = 0.67
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 122 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 214
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 256 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 287
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 95 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 214
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 12 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 52
>U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein.
Length = 565
Score = 31.1 bits (67), Expect = 0.50
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 116 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 211
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 328 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 360
Score = 30.7 bits (66), Expect = 0.67
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 122 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 214
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 464 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 495
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 95 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 214
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 220 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 260
>U04712-1|AAA81901.1| 374|Caenorhabditis elegans unc-87 protein.
Length = 374
Score = 31.1 bits (67), Expect = 0.50
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 116 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 211
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 137 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 169
Score = 30.7 bits (66), Expect = 0.67
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 122 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 214
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 273 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 304
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 95 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 214
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 29 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 69
>U04711-2|AAA81900.1| 357|Caenorhabditis elegans unc-87 protein.
Length = 357
Score = 31.1 bits (67), Expect = 0.50
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 116 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 211
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 120 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 152
Score = 30.7 bits (66), Expect = 0.67
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 122 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 214
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 256 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 287
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 95 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 214
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 12 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 52
>U04711-1|AAA81899.1| 374|Caenorhabditis elegans unc-87 protein.
Length = 374
Score = 31.1 bits (67), Expect = 0.50
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 116 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 211
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 137 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 169
Score = 30.7 bits (66), Expect = 0.67
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 122 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 214
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 273 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 304
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 95 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 214
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 29 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 69
>AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated
protein 87, isoform c protein.
Length = 544
Score = 31.1 bits (67), Expect = 0.50
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 116 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 211
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 307 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 339
Score = 30.7 bits (66), Expect = 0.67
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 122 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 214
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 443 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 474
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 95 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 214
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 199 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 239
>AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated
protein 87, isoform a protein.
Length = 565
Score = 31.1 bits (67), Expect = 0.50
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 116 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 211
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 328 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 360
Score = 30.7 bits (66), Expect = 0.67
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 122 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 214
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 464 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 495
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 95 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 214
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 220 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 260
>AF106590-4|AAK68303.1| 374|Caenorhabditis elegans Uncoordinated
protein 87, isoform b protein.
Length = 374
Score = 31.1 bits (67), Expect = 0.50
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 116 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 211
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 137 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 169
Score = 30.7 bits (66), Expect = 0.67
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 122 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 214
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 273 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 304
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 95 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 214
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 29 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 69
>U64856-5|AAT81185.1| 301|Caenorhabditis elegans Hypothetical
protein T25F10.6b protein.
Length = 301
Score = 30.7 bits (66), Expect = 0.67
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +2
Query: 113 SEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 211
++E+L +G+I +Q GSNK A+Q G+ FG R
Sbjct: 92 TKEKLMRSEGIIPIQAGSNKYASQKGMTGFGVPR 125
>U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical
protein C53C9.2 protein.
Length = 397
Score = 30.3 bits (65), Expect = 0.88
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +2
Query: 104 RNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 214
++ EE + +G++ LQ G+NK A+Q G+ FG R+
Sbjct: 241 KDIEEELKQKSEGIVPLQSGTNKLASQRGMTGFGTPRN 278
>Z82051-6|CAB04821.1| 354|Caenorhabditis elegans Hypothetical
protein T23D5.9 protein.
Length = 354
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Frame = -3
Query: 282 SDLEASSMLEQAIQMCTFRQFYMCLVLPKLI------PLWLAPLFEP 160
++L+ S++ Q +Q F+ + V+P L P+ +APLFEP
Sbjct: 228 NELQQQSIVNQKLQKQFFKALVVQTVVPTLFFVLPIAPILIAPLFEP 274
>AF016657-1|AAB93653.1| 361|Caenorhabditis elegans Hypothetical
protein C16C4.7 protein.
Length = 361
Score = 27.1 bits (57), Expect = 8.2
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = +1
Query: 214 HVKLSKRAHLNGL-FKHARCF*VT---VLKFRRENFYILNNSHSLQKSLYLDSNNVGKND 381
H+ LS ++H+ F H + T K+R + + LN + K+LY NV KN
Sbjct: 20 HLLLSLKSHIRPFCFLHKQQKKKTSNETCKYRENSTFTLNARSNFSKTLYKYRENVPKNS 79
Query: 382 I 384
I
Sbjct: 80 I 80
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,884,147
Number of Sequences: 27780
Number of extensions: 220159
Number of successful extensions: 542
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 542
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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