Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS31002
         (774 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ133736-1|CAB39319.1|  304|Drosophila melanogaster BM-40 protein.    128   6e-30
AE014297-4005|AAF56632.2|  304|Drosophila melanogaster CG6378-PA...   128   6e-30
AY071738-1|AAL49360.1|  304|Drosophila melanogaster RH45818p pro...   125   6e-29
BT030255-1|ABN49394.1|  424|Drosophila melanogaster IP18339p pro...    32   1.0  
BT030205-1|ABN49344.1|  424|Drosophila melanogaster IP18039p pro...    32   1.0  
AY058325-1|AAL13554.1|  662|Drosophila melanogaster GH09510p pro...    31   2.3  
AE014297-2619|AAF55629.2| 1542|Drosophila melanogaster CG6026-PA...    31   2.3  
AE014296-1453|AAF50418.2|  662|Drosophila melanogaster CG32354-P...    31   2.3  
BT001711-1|AAN71466.1|  182|Drosophila melanogaster RE67695p pro...    30   4.1  
AE014296-1719|AAN11954.1|  182|Drosophila melanogaster CG16707-P...    30   4.1  
AE014296-1718|AAN11953.1|  182|Drosophila melanogaster CG16707-P...    30   4.1  
AE014296-1717|AAN11952.1|  183|Drosophila melanogaster CG16707-P...    30   4.1  
AE014296-1716|AAF50218.1|  183|Drosophila melanogaster CG16707-P...    30   4.1  

>AJ133736-1|CAB39319.1|  304|Drosophila melanogaster BM-40 protein.
          Length = 304

 Score =  128 bits (310), Expect = 6e-30
 Identities = 50/81 (61%), Positives = 62/81 (76%)
 Frame = +2

Query: 521 CRGPQYHHVQIEYYGTCREMPDCTESEMSDFPRRMRDWLFNIMRDMAERRELTPHYLKME 700
           C  P   H+ I+YYG C E   C   ++ DFPRRMRDWLFN+MRD+AER ELT HY++ME
Sbjct: 149 CTNPDNAHMHIDYYGACHEPRSCEGEDLKDFPRRMRDWLFNVMRDLAERDELTEHYMQME 208

Query: 701 REAESNFTRRWANAAIWKWCD 763
            EAE+N +RRW+NAA+WKWCD
Sbjct: 209 LEAETNNSRRWSNAAVWKWCD 229



 Score = 73.3 bits (172), Expect = 3e-13
 Identities = 28/50 (56%), Positives = 37/50 (74%)
 Frame = +3

Query: 354 RVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCLC 503
           R+C++++     C CI +CP E D+RR+VCTN NETW SDC VY+QRC C
Sbjct: 94  RICQMHDE-KPKCVCIPECPEEVDTRRLVCTNTNETWPSDCSVYQQRCWC 142


>AE014297-4005|AAF56632.2|  304|Drosophila melanogaster CG6378-PA
           protein.
          Length = 304

 Score =  128 bits (310), Expect = 6e-30
 Identities = 50/81 (61%), Positives = 62/81 (76%)
 Frame = +2

Query: 521 CRGPQYHHVQIEYYGTCREMPDCTESEMSDFPRRMRDWLFNIMRDMAERRELTPHYLKME 700
           C  P   H+ I+YYG C E   C   ++ DFPRRMRDWLFN+MRD+AER ELT HY++ME
Sbjct: 149 CTNPDNAHMHIDYYGACHEPRSCEGEDLKDFPRRMRDWLFNVMRDLAERDELTEHYMQME 208

Query: 701 REAESNFTRRWANAAIWKWCD 763
            EAE+N +RRW+NAA+WKWCD
Sbjct: 209 LEAETNNSRRWSNAAVWKWCD 229



 Score = 73.3 bits (172), Expect = 3e-13
 Identities = 28/50 (56%), Positives = 37/50 (74%)
 Frame = +3

Query: 354 RVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCLC 503
           R+C++++     C CI +CP E D+RR+VCTN NETW SDC VY+QRC C
Sbjct: 94  RICQMHDE-KPKCVCIPECPEEVDTRRLVCTNTNETWPSDCSVYQQRCWC 142


>AY071738-1|AAL49360.1|  304|Drosophila melanogaster RH45818p
           protein.
          Length = 304

 Score =  125 bits (302), Expect = 6e-29
 Identities = 49/81 (60%), Positives = 61/81 (75%)
 Frame = +2

Query: 521 CRGPQYHHVQIEYYGTCREMPDCTESEMSDFPRRMRDWLFNIMRDMAERRELTPHYLKME 700
           C  P   H+ I+YYG C E   C   ++ DFPRRMRDWLF +MRD+AER ELT HY++ME
Sbjct: 149 CTNPDNAHMHIDYYGACHEPRSCEGEDLKDFPRRMRDWLFYVMRDLAERDELTEHYMQME 208

Query: 701 REAESNFTRRWANAAIWKWCD 763
            EAE+N +RRW+NAA+WKWCD
Sbjct: 209 LEAETNNSRRWSNAAVWKWCD 229



 Score = 73.3 bits (172), Expect = 3e-13
 Identities = 28/50 (56%), Positives = 37/50 (74%)
 Frame = +3

Query: 354 RVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCLC 503
           R+C++++     C CI +CP E D+RR+VCTN NETW SDC VY+QRC C
Sbjct: 94  RICQMHDE-KPKCVCIPECPEEVDTRRLVCTNTNETWPSDCSVYQQRCWC 142


>BT030255-1|ABN49394.1|  424|Drosophila melanogaster IP18339p
           protein.
          Length = 424

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = +1

Query: 346 SADVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAY 501
           + D S   T TE P  +   TVP+   P+A+CA+  +K   R+   T    Y
Sbjct: 336 TTDSSTSPTTTE-PSTSVQTTVPSEIDPNAYCAKLKSKGYFRVETDTTCQMY 386


>BT030205-1|ABN49344.1|  424|Drosophila melanogaster IP18039p
           protein.
          Length = 424

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = +1

Query: 346 SADVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAY 501
           + D S   T TE P  +   TVP+   P+A+CA+  +K   R+   T    Y
Sbjct: 336 TTDSSTSPTTTE-PSTSVQTTVPSEIDPNAYCAKLKSKGYFRVETDTTCQMY 386


>AY058325-1|AAL13554.1|  662|Drosophila melanogaster GH09510p
           protein.
          Length = 662

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
 Frame = +3

Query: 348 RRRVCEINEHGDAMCNCI--KDCPYETDSR--RMVCTNFNETWQSDCEVYRQRC 497
           +RR C++     ++ NC    DC  + D++    VC + N  ++S+C + ++ C
Sbjct: 532 KRRTCDLRVVPVSLKNCALTADCESDCDAQPPSFVCGSDNNLYKSECHMRKENC 585


>AE014297-2619|AAF55629.2| 1542|Drosophila melanogaster CG6026-PA
           protein.
          Length = 1542

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = +1

Query: 367 STNTETPCVTASR-TVPTRQTPDAWCAQTSTKPGNRIAKYTASDAYASKL*SVPWSAIPP 543
           ST+T T   T +R T+P  + P      T+T P +  AKYT +      L +V  +  PP
Sbjct: 194 STSTTTTTTTTTRGTLPPSRKPVT--TTTTTAPTSPAAKYTTTSRRPIPLQTVSTTPQPP 251

Query: 544 RSN 552
           R++
Sbjct: 252 RTS 254


>AE014296-1453|AAF50418.2|  662|Drosophila melanogaster CG32354-PA
           protein.
          Length = 662

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
 Frame = +3

Query: 348 RRRVCEINEHGDAMCNCI--KDCPYETDSR--RMVCTNFNETWQSDCEVYRQRC 497
           +RR C++     ++ NC    DC  + D++    VC + N  ++S+C + ++ C
Sbjct: 532 KRRTCDLRVVPVSLKNCALTADCESDCDAQPPSFVCGSDNNLYKSECHMRKENC 585


>BT001711-1|AAN71466.1|  182|Drosophila melanogaster RE67695p
           protein.
          Length = 182

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +1

Query: 364 KSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPG 465
           K+T + TP  T S T P   T     A T+T PG
Sbjct: 78  KTTTSTTPASTTSSTTPASTTSSTTPATTTTTPG 111


>AE014296-1719|AAN11954.1|  182|Drosophila melanogaster CG16707-PB,
           isoform B protein.
          Length = 182

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +1

Query: 364 KSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPG 465
           K+T + TP  T S T P   T     A T+T PG
Sbjct: 78  KTTTSTTPASTTSSTTPASTTSSTTPATTTTTPG 111


>AE014296-1718|AAN11953.1|  182|Drosophila melanogaster CG16707-PA,
           isoform A protein.
          Length = 182

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +1

Query: 364 KSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPG 465
           K+T + TP  T S T P   T     A T+T PG
Sbjct: 78  KTTTSTTPASTTSSTTPASTTSSTTPATTTTTPG 111


>AE014296-1717|AAN11952.1|  183|Drosophila melanogaster CG16707-PD,
           isoform D protein.
          Length = 183

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +1

Query: 364 KSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPG 465
           K+T + TP  T S T P   T     A T+T PG
Sbjct: 79  KTTTSTTPASTTSSTTPASTTSSTTPATTTTTPG 112


>AE014296-1716|AAF50218.1|  183|Drosophila melanogaster CG16707-PC,
           isoform C protein.
          Length = 183

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +1

Query: 364 KSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPG 465
           K+T + TP  T S T P   T     A T+T PG
Sbjct: 79  KTTTSTTPASTTSSTTPASTTSSTTPATTTTTPG 112


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,381,664
Number of Sequences: 53049
Number of extensions: 740225
Number of successful extensions: 2519
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2519
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)