Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS31002
(774 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 32 0.005
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 28 0.084
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 2.4
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 23 2.4
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 22 5.5
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 22 7.3
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 7.3
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 22 7.3
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 21 9.6
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 9.6
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 32.3 bits (70), Expect = 0.005
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 360 CEINEHGD-AMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 497
CE++ + A+C C++ CP R VC + + + + CE++R C
Sbjct: 93 CELSPNSTIAVCVCMRKCPRR---HRPVCASNGKIYANHCELHRAAC 136
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 28.3 bits (60), Expect = 0.084
Identities = 28/89 (31%), Positives = 33/89 (37%), Gaps = 1/89 (1%)
Frame = +3
Query: 354 RVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCL-CLETLISAVV 530
+VC H D+ C C+ DS V NFNE+ E R CL ET S
Sbjct: 344 QVCRSRRHSDSCCLCL-------DSMNAVIRNFNES-----ENRRNSCLGSTETYYSK-- 389
Query: 531 RNTTTFKSSITERAEKCLTALKARCLTSP 617
NT F I E + K L P
Sbjct: 390 HNTQQFTQYIPESSSNLQEKTKIDLLEIP 418
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.4 bits (48), Expect = 2.4
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 331 LKVHCSADVSAKSTNTETPCVTASRTVPTR 420
L V+ AD++ K+ T V+ + VPT+
Sbjct: 82 LAVNAEADITLKNAGTPPEAVSYNVAVPTK 111
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 23.4 bits (48), Expect = 2.4
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 331 LKVHCSADVSAKSTNTETPCVTASRTVPTR 420
L V+ AD++ K+ T V+ + VPT+
Sbjct: 82 LAVNAEADITLKNAGTPPEAVSYNVAVPTK 111
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 22.2 bits (45), Expect = 5.5
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = +3
Query: 360 CEINEHGDAMCNCIKDCPYETDSRRMVC 443
C EH + DC E +RR +C
Sbjct: 301 CVSGEHLSVSGGALNDCHAEVVARRCLC 328
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.8 bits (44), Expect = 7.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 673 LSTFSHVAHDVKKPVPHATGEVRH 602
+++FSH + DVK + ATG H
Sbjct: 276 IASFSHRSIDVKDGIVLATGITVH 299
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 7.3
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 554 EYYGTCREMPDCTESEMSDFPRRMRD 631
+Y + MPD E+E+SD +RD
Sbjct: 74 QYARVQQSMPDGWETEISDQMLELRD 99
Score = 21.8 bits (44), Expect = 7.3
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 335 KSTAAQTCLRNQRTRRRHV 391
KS C+R +RT++R+V
Sbjct: 1643 KSLQDHDCIRQERTQQRNV 1661
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.8 bits (44), Expect = 7.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 673 LSTFSHVAHDVKKPVPHATGEVRH 602
+++FSH + DVK + ATG H
Sbjct: 276 IASFSHRSIDVKDGIVLATGITVH 299
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 21.4 bits (43), Expect = 9.6
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = -3
Query: 526 TALIRVSRHKHRWRYTS 476
T+L+ + + ++ WR+TS
Sbjct: 378 TSLVSLDKKQYTWRHTS 394
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.4 bits (43), Expect = 9.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2
Query: 191 QPPRCPRGR 165
QPP+CPR R
Sbjct: 564 QPPQCPRFR 572
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,978
Number of Sequences: 438
Number of extensions: 3861
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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