Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30997
         (351 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        27   0.085
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        27   0.085
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        27   0.085
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    21   5.6  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    21   5.6  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    21   5.6  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    21   5.6  
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    20   7.4  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    20   9.8  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              20   9.8  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              20   9.8  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 26.6 bits (56), Expect = 0.085
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -3

Query: 343 FFFIIVKQNMSYFVFLVFFPDRVIHDCDPTNMDFNVK 233
           F F+I  Q+ S  +F +  P+    +CD    D  VK
Sbjct: 20  FLFVIAAQDSSGRIFTICVPEIYSKECDEMKKDSAVK 56


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 26.6 bits (56), Expect = 0.085
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -3

Query: 343 FFFIIVKQNMSYFVFLVFFPDRVIHDCDPTNMDFNVK 233
           F F+I  Q+ S  +F +  P+    +CD    D  VK
Sbjct: 20  FLFVIAAQDSSGRIFTICVPEIYSKECDEMKKDSAVK 56


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 26.6 bits (56), Expect = 0.085
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -3

Query: 343 FFFIIVKQNMSYFVFLVFFPDRVIHDCDPTNMDFNVK 233
           F F+I  Q+ S  +F +  P+    +CD    D  VK
Sbjct: 20  FLFVIAAQDSSGRIFTICVPEIYSKECDEMKKDSAVK 56


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = +1

Query: 43  DRGS*NWNRVPVSVTIKKNILIVVG 117
           ++G  NWN++P          I+ G
Sbjct: 64  EQGVVNWNKIPEGANTTSTTKIIDG 88


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = +1

Query: 43  DRGS*NWNRVPVSVTIKKNILIVVG 117
           ++G  NWN++P          I+ G
Sbjct: 112 EQGVVNWNKIPEGANTTSTTKIIDG 136


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = +1

Query: 43  DRGS*NWNRVPVSVTIKKNILIVVG 117
           ++G  NWN++P          I+ G
Sbjct: 112 EQGVVNWNKIPEGANTTSTTKIIDG 136


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = +1

Query: 43  DRGS*NWNRVPVSVTIKKNILIVVG 117
           ++G  NWN++P          I+ G
Sbjct: 112 EQGVVNWNKIPEGANTTSTTKIIDG 136


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = +2

Query: 158 YFTNRNRKNKYYQCQHL 208
           Y+ N N K  YY   ++
Sbjct: 317 YYNNNNYKKLYYNINYI 333


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 167 NRNRKNKYYQCQHLNTQNG 223
           N+N  N+    Q+ N QNG
Sbjct: 439 NQNANNQNADNQNANKQNG 457


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 177 RFRFVKYVGNFKKNQVIFLEANY 109
           +F  V   GNFK+N V  L + Y
Sbjct: 69  QFNIVDESGNFKENIVQELTSIY 91


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 177 RFRFVKYVGNFKKNQVIFLEANY 109
           +F  V   GNFK+N V  L + Y
Sbjct: 69  QFNIVDESGNFKENIVQELTSIY 91


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,918
Number of Sequences: 438
Number of extensions: 1806
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8060325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)