Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30996
(693 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC032446-1|AAH32446.1| 767|Homo sapiens cold shock domain conta... 83 7e-16
AY049788-1|AAL15445.1| 708|Homo sapiens NRAS-related protein pr... 83 7e-16
AL096773-5|CAI18825.1| 798|Homo sapiens cold shock domain conta... 83 7e-16
AL096773-4|CAI18826.1| 767|Homo sapiens cold shock domain conta... 83 7e-16
AK022528-1|BAB14080.1| 767|Homo sapiens protein ( Homo sapiens ... 83 7e-16
AK022516-1|BAB14073.1| 767|Homo sapiens protein ( Homo sapiens ... 83 7e-16
AF070542-1|AAC28634.1| 467|Homo sapiens unknown protein. 83 7e-16
AB020692-1|BAA74908.2| 826|Homo sapiens KIAA0885 protein protein. 83 7e-16
AL050150-1|CAB43294.1| 369|Homo sapiens hypothetical protein pr... 56 2e-07
BC021692-1|AAH21692.1| 272|Homo sapiens CSDE1 protein protein. 44 4e-04
AL110192-1|CAB53670.1| 171|Homo sapiens hypothetical protein pr... 40 0.008
>BC032446-1|AAH32446.1| 767|Homo sapiens cold shock domain
containing E1, RNA-binding protein.
Length = 767
Score = 83.4 bits (197), Expect = 7e-16
Identities = 47/88 (53%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Frame = +3
Query: 258 TGDAVSFQIATNQR-GTLGACHIRFENPVHPVKYHGVVCSMKENFGFIERADVVKEIFFH 434
TGD ++F I N+ G + A +I + GVVC+MKE FGFIER DVVKEIFFH
Sbjct: 123 TGDKINFVIDNNKHTGAVSARNIMLLKKKQ-ARCQGVVCAMKEAFGFIERGDVVKEIFFH 181
Query: 435 FSETKCK-EELTLGDDVEFIIQTRNGKK 515
+SE K E L GDDVEF I+ RNGK+
Sbjct: 182 YSEFKGDLETLQPGDDVEFTIKDRNGKE 209
Score = 55.6 bits (128), Expect = 2e-07
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Frame = +3
Query: 261 GDAVSFQIATNQRG--TLGACHIRFENPVHPVKYHGVVCSMKENFGFIERADVVKEIFFH 434
GD V F I+ QR + C + + G V ++K+NFGFIE A+ KEIFFH
Sbjct: 455 GDKVEFSISDKQRPGQQVATCVRLLGRNSNSKRLLGYVATLKDNFGFIETANHDKEIFFH 514
Query: 435 FSE-TKCKEELTLGDDVEFIIQTRNGKK 515
+SE + + L LGD VE+ + G K
Sbjct: 515 YSEFSGDVDSLELGDMVEYSLSKGKGNK 542
Score = 50.8 bits (116), Expect = 5e-06
Identities = 25/52 (48%), Positives = 34/52 (65%)
Frame = +2
Query: 509 KEVACNITKLPSGSVVFEDVSPEIMRGQVLKPLERGNLVRATQNDPLPGRIR 664
KEVA ++ LP G+V+FED+S E G V K + + + QNDPLPGRI+
Sbjct: 208 KEVATDVRLLPQGTVIFEDISIEHFEGTVTKVIPK--VPSKNQNDPLPGRIK 257
Score = 48.4 bits (110), Expect = 2e-05
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Frame = +3
Query: 261 GDAVSFQIATNQRGTLG-ACHIR-FENP---VHPVKYHGVVCSMKENFGFIERADVVKEI 425
GD V F I+T++R L A +I N + + GV+ +M++ FGFI+ D +
Sbjct: 282 GDHVRFNISTDRRDKLERATNIEVLSNTFQFTNEAREMGVIAAMRDGFGFIKCVDRDVRM 341
Query: 426 FFHFSETKCKEELTLGDDVEFII 494
FFHFSE +L + D+VEF +
Sbjct: 342 FFHFSEILDGNQLHIADEVEFTV 364
Score = 46.4 bits (105), Expect(2) = 2e-07
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = +1
Query: 1 EHLKIGDPVEFEMTYDRRTGKPIASTVTKIAPEVV 105
+ LK+GD VEFE++ DRRTGKPIA + KI E++
Sbjct: 61 QDLKVGDDVEFEVSSDRRTGKPIAVKLVKIKQEIL 95
Score = 39.9 bits (89), Expect = 0.008
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Frame = +3
Query: 261 GDAVSFQIATNQRGTLGACHIRFENPVHPVKYHGVVCSMKENFGFIE-RADVVKEIFFHF 437
G++V FQ+ LG + P++ V C +K+ FGFI K++FFH
Sbjct: 618 GESVKFQLCV-----LGQNAQTMAYNITPLRRATVEC-VKDQFGFINYEVGDSKKLFFHV 671
Query: 438 SETKCKEELTLGDDVEF--IIQTRNGK 512
E + EL GD+VEF I+ R GK
Sbjct: 672 KEVQDGIELQAGDEVEFSVILNQRTGK 698
Score = 36.7 bits (81), Expect = 0.079
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Frame = +3
Query: 360 GVVCSMKENFGFIERADVVKEIFFHFSETKCK-EELTLGDDVEFIIQT--RNGKKWHVTL 530
GV+ + ++GFI+ ++ +FFH S+ ++L +GDDVEF + + R GK V L
Sbjct: 28 GVIEKLLTSYGFIQCSERQARLFFHCSQYNGNLQDLKVGDDVEFEVSSDRRTGKPIAVKL 87
Query: 531 L 533
+
Sbjct: 88 V 88
Score = 28.3 bits (60), Expect(2) = 2e-07
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 202 ECFFLPYTKDDVEGNV 249
E F+L YT +DVEGNV
Sbjct: 104 EVFYLTYTPEDVEGNV 119
>AY049788-1|AAL15445.1| 708|Homo sapiens NRAS-related protein
protein.
Length = 708
Score = 83.4 bits (197), Expect = 7e-16
Identities = 47/88 (53%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Frame = +3
Query: 258 TGDAVSFQIATNQR-GTLGACHIRFENPVHPVKYHGVVCSMKENFGFIERADVVKEIFFH 434
TGD ++F I N+ G + A +I + GVVC+MKE FGFIER DVVKEIFFH
Sbjct: 123 TGDKINFVIDNNKHTGAVSARNIMLLKKKQ-ARCQGVVCAMKEAFGFIERGDVVKEIFFH 181
Query: 435 FSETKCK-EELTLGDDVEFIIQTRNGKK 515
+SE K E L GDDVEF I+ RNGK+
Sbjct: 182 YSEFKGDLETLQPGDDVEFTIKDRNGKE 209
Score = 55.6 bits (128), Expect = 2e-07
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Frame = +3
Query: 261 GDAVSFQIATNQRG--TLGACHIRFENPVHPVKYHGVVCSMKENFGFIERADVVKEIFFH 434
GD V F I+ QR + C + + G V ++K+NFGFIE A+ KEIFFH
Sbjct: 455 GDKVEFSISDKQRPGQQVATCVRLLGRNSNSKRLLGYVATLKDNFGFIETANHDKEIFFH 514
Query: 435 FSE-TKCKEELTLGDDVEFIIQTRNGKK 515
+SE + + L LGD VE+ + G K
Sbjct: 515 YSEFSGDVDSLELGDMVEYSLSKGKGNK 542
Score = 50.8 bits (116), Expect = 5e-06
Identities = 25/52 (48%), Positives = 34/52 (65%)
Frame = +2
Query: 509 KEVACNITKLPSGSVVFEDVSPEIMRGQVLKPLERGNLVRATQNDPLPGRIR 664
KEVA ++ LP G+V+FED+S E G V K + + + QNDPLPGRI+
Sbjct: 208 KEVATDVRLLPQGTVIFEDISIEHFEGTVTKVIPK--VPSKNQNDPLPGRIK 257
Score = 48.4 bits (110), Expect = 2e-05
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Frame = +3
Query: 261 GDAVSFQIATNQRGTLG-ACHIR-FENP---VHPVKYHGVVCSMKENFGFIERADVVKEI 425
GD V F I+T++R L A +I N + + GV+ +M++ FGFI+ D +
Sbjct: 282 GDHVRFNISTDRRDKLERATNIEVLSNTFQFTNEAREMGVIAAMRDGFGFIKCVDRDVRM 341
Query: 426 FFHFSETKCKEELTLGDDVEFII 494
FFHFSE +L + D+VEF +
Sbjct: 342 FFHFSEILDGNQLHIADEVEFTV 364
Score = 46.4 bits (105), Expect(2) = 2e-07
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = +1
Query: 1 EHLKIGDPVEFEMTYDRRTGKPIASTVTKIAPEVV 105
+ LK+GD VEFE++ DRRTGKPIA + KI E++
Sbjct: 61 QDLKVGDDVEFEVSSDRRTGKPIAVKLVKIKQEIL 95
Score = 39.9 bits (89), Expect = 0.008
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Frame = +3
Query: 261 GDAVSFQIATNQRGTLGACHIRFENPVHPVKYHGVVCSMKENFGFIE-RADVVKEIFFHF 437
G++V FQ+ LG + P++ V C +K+ FGFI K++FFH
Sbjct: 618 GESVKFQLCV-----LGQNAQTMAYNITPLRRATVEC-VKDQFGFINYEVGDSKKLFFHV 671
Query: 438 SETKCKEELTLGDDVEF--IIQTRNGK 512
E + EL GD+VEF I+ R GK
Sbjct: 672 KEVQDGIELQAGDEVEFSVILNQRTGK 698
Score = 36.7 bits (81), Expect = 0.079
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Frame = +3
Query: 360 GVVCSMKENFGFIERADVVKEIFFHFSETKCK-EELTLGDDVEFIIQT--RNGKKWHVTL 530
GV+ + ++GFI+ ++ +FFH S+ ++L +GDDVEF + + R GK V L
Sbjct: 28 GVIEKLLTSYGFIQCSERQARLFFHCSQYNGNLQDLKVGDDVEFEVSSDRRTGKPIAVKL 87
Query: 531 L 533
+
Sbjct: 88 V 88
Score = 28.3 bits (60), Expect(2) = 2e-07
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 202 ECFFLPYTKDDVEGNV 249
E F+L YT +DVEGNV
Sbjct: 104 EVFYLTYTPEDVEGNV 119
>AL096773-5|CAI18825.1| 798|Homo sapiens cold shock domain
containing E1, RNA-binding protein.
Length = 798
Score = 83.4 bits (197), Expect = 7e-16
Identities = 47/88 (53%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Frame = +3
Query: 258 TGDAVSFQIATNQR-GTLGACHIRFENPVHPVKYHGVVCSMKENFGFIERADVVKEIFFH 434
TGD ++F I N+ G + A +I + GVVC+MKE FGFIER DVVKEIFFH
Sbjct: 154 TGDKINFVIDNNKHTGAVSARNIMLLKKKQ-ARCQGVVCAMKEAFGFIERGDVVKEIFFH 212
Query: 435 FSETKCK-EELTLGDDVEFIIQTRNGKK 515
+SE K E L GDDVEF I+ RNGK+
Sbjct: 213 YSEFKGDLETLQPGDDVEFTIKDRNGKE 240
Score = 66.1 bits (154), Expect = 1e-10
Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Frame = +1
Query: 1 EHLKIGDPVEFEMTYDRRTGKPIASTVTKIAPEVVLSXXXXXXXXXXXXXXXXS------ 162
+ LK+GD VEFE++ DRRTGKPIA + KI E++ S
Sbjct: 61 QDLKVGDDVEFEVSSDRRTGKPIAVKLVKIKQEILPEERMNGQVVCAVPHNLESKSPAAP 120
Query: 163 GDN-TGRISYETRGECFFLPYTKDDVEGNV 249
G + TG + YE GE F+L YT +DVEGNV
Sbjct: 121 GQSPTGSVCYERNGEVFYLTYTPEDVEGNV 150
Score = 55.6 bits (128), Expect = 2e-07
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Frame = +3
Query: 261 GDAVSFQIATNQRG--TLGACHIRFENPVHPVKYHGVVCSMKENFGFIERADVVKEIFFH 434
GD V F I+ QR + C + + G V ++K+NFGFIE A+ KEIFFH
Sbjct: 486 GDKVEFSISDKQRPGQQVATCVRLLGRNSNSKRLLGYVATLKDNFGFIETANHDKEIFFH 545
Query: 435 FSE-TKCKEELTLGDDVEFIIQTRNGKK 515
+SE + + L LGD VE+ + G K
Sbjct: 546 YSEFSGDVDSLELGDMVEYSLSKGKGNK 573
Score = 50.8 bits (116), Expect = 5e-06
Identities = 25/52 (48%), Positives = 34/52 (65%)
Frame = +2
Query: 509 KEVACNITKLPSGSVVFEDVSPEIMRGQVLKPLERGNLVRATQNDPLPGRIR 664
KEVA ++ LP G+V+FED+S E G V K + + + QNDPLPGRI+
Sbjct: 239 KEVATDVRLLPQGTVIFEDISIEHFEGTVTKVIPK--VPSKNQNDPLPGRIK 288
Score = 48.4 bits (110), Expect = 2e-05
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Frame = +3
Query: 261 GDAVSFQIATNQRGTLG-ACHIR-FENP---VHPVKYHGVVCSMKENFGFIERADVVKEI 425
GD V F I+T++R L A +I N + + GV+ +M++ FGFI+ D +
Sbjct: 313 GDHVRFNISTDRRDKLERATNIEVLSNTFQFTNEAREMGVIAAMRDGFGFIKCVDRDVRM 372
Query: 426 FFHFSETKCKEELTLGDDVEFII 494
FFHFSE +L + D+VEF +
Sbjct: 373 FFHFSEILDGNQLHIADEVEFTV 395
Score = 39.9 bits (89), Expect = 0.008
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Frame = +3
Query: 261 GDAVSFQIATNQRGTLGACHIRFENPVHPVKYHGVVCSMKENFGFIE-RADVVKEIFFHF 437
G++V FQ+ LG + P++ V C +K+ FGFI K++FFH
Sbjct: 649 GESVKFQLCV-----LGQNAQTMAYNITPLRRATVEC-VKDQFGFINYEVGDSKKLFFHV 702
Query: 438 SETKCKEELTLGDDVEF--IIQTRNGK 512
E + EL GD+VEF I+ R GK
Sbjct: 703 KEVQDGIELQAGDEVEFSVILNQRTGK 729
Score = 36.7 bits (81), Expect = 0.079
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Frame = +3
Query: 360 GVVCSMKENFGFIERADVVKEIFFHFSETKCK-EELTLGDDVEFIIQT--RNGKKWHVTL 530
GV+ + ++GFI+ ++ +FFH S+ ++L +GDDVEF + + R GK V L
Sbjct: 28 GVIEKLLTSYGFIQCSERQARLFFHCSQYNGNLQDLKVGDDVEFEVSSDRRTGKPIAVKL 87
Query: 531 L 533
+
Sbjct: 88 V 88
>AL096773-4|CAI18826.1| 767|Homo sapiens cold shock domain
containing E1, RNA-binding protein.
Length = 767
Score = 83.4 bits (197), Expect = 7e-16
Identities = 47/88 (53%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Frame = +3
Query: 258 TGDAVSFQIATNQR-GTLGACHIRFENPVHPVKYHGVVCSMKENFGFIERADVVKEIFFH 434
TGD ++F I N+ G + A +I + GVVC+MKE FGFIER DVVKEIFFH
Sbjct: 123 TGDKINFVIDNNKHTGAVSARNIMLLKKKQ-ARCQGVVCAMKEAFGFIERGDVVKEIFFH 181
Query: 435 FSETKCK-EELTLGDDVEFIIQTRNGKK 515
+SE K E L GDDVEF I+ RNGK+
Sbjct: 182 YSEFKGDLETLQPGDDVEFTIKDRNGKE 209
Score = 55.6 bits (128), Expect = 2e-07
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Frame = +3
Query: 261 GDAVSFQIATNQRG--TLGACHIRFENPVHPVKYHGVVCSMKENFGFIERADVVKEIFFH 434
GD V F I+ QR + C + + G V ++K+NFGFIE A+ KEIFFH
Sbjct: 455 GDKVEFSISDKQRPGQQVATCVRLLGRNSNSKRLLGYVATLKDNFGFIETANHDKEIFFH 514
Query: 435 FSE-TKCKEELTLGDDVEFIIQTRNGKK 515
+SE + + L LGD VE+ + G K
Sbjct: 515 YSEFSGDVDSLELGDMVEYSLSKGKGNK 542
Score = 50.8 bits (116), Expect = 5e-06
Identities = 25/52 (48%), Positives = 34/52 (65%)
Frame = +2
Query: 509 KEVACNITKLPSGSVVFEDVSPEIMRGQVLKPLERGNLVRATQNDPLPGRIR 664
KEVA ++ LP G+V+FED+S E G V K + + + QNDPLPGRI+
Sbjct: 208 KEVATDVRLLPQGTVIFEDISIEHFEGTVTKVIPK--VPSKNQNDPLPGRIK 257
Score = 48.4 bits (110), Expect = 2e-05
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Frame = +3
Query: 261 GDAVSFQIATNQRGTLG-ACHIR-FENP---VHPVKYHGVVCSMKENFGFIERADVVKEI 425
GD V F I+T++R L A +I N + + GV+ +M++ FGFI+ D +
Sbjct: 282 GDHVRFNISTDRRDKLERATNIEVLSNTFQFTNEAREMGVIAAMRDGFGFIKCVDRDVRM 341
Query: 426 FFHFSETKCKEELTLGDDVEFII 494
FFHFSE +L + D+VEF +
Sbjct: 342 FFHFSEILDGNQLHIADEVEFTV 364
Score = 46.4 bits (105), Expect(2) = 2e-07
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = +1
Query: 1 EHLKIGDPVEFEMTYDRRTGKPIASTVTKIAPEVV 105
+ LK+GD VEFE++ DRRTGKPIA + KI E++
Sbjct: 61 QDLKVGDDVEFEVSSDRRTGKPIAVKLVKIKQEIL 95
Score = 39.9 bits (89), Expect = 0.008
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Frame = +3
Query: 261 GDAVSFQIATNQRGTLGACHIRFENPVHPVKYHGVVCSMKENFGFIE-RADVVKEIFFHF 437
G++V FQ+ LG + P++ V C +K+ FGFI K++FFH
Sbjct: 618 GESVKFQLCV-----LGQNAQTMAYNITPLRRATVEC-VKDQFGFINYEVGDSKKLFFHV 671
Query: 438 SETKCKEELTLGDDVEF--IIQTRNGK 512
E + EL GD+VEF I+ R GK
Sbjct: 672 KEVQDGIELQAGDEVEFSVILNQRTGK 698
Score = 36.7 bits (81), Expect = 0.079
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Frame = +3
Query: 360 GVVCSMKENFGFIERADVVKEIFFHFSETKCK-EELTLGDDVEFIIQT--RNGKKWHVTL 530
GV+ + ++GFI+ ++ +FFH S+ ++L +GDDVEF + + R GK V L
Sbjct: 28 GVIEKLLTSYGFIQCSERQARLFFHCSQYNGNLQDLKVGDDVEFEVSSDRRTGKPIAVKL 87
Query: 531 L 533
+
Sbjct: 88 V 88
Score = 28.3 bits (60), Expect(2) = 2e-07
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 202 ECFFLPYTKDDVEGNV 249
E F+L YT +DVEGNV
Sbjct: 104 EVFYLTYTPEDVEGNV 119
>AK022528-1|BAB14080.1| 767|Homo sapiens protein ( Homo sapiens
cDNA FLJ12466 fis, clone NT2RM1000826, highly similar to
UNR PROTEIN. ).
Length = 767
Score = 83.4 bits (197), Expect = 7e-16
Identities = 47/88 (53%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Frame = +3
Query: 258 TGDAVSFQIATNQR-GTLGACHIRFENPVHPVKYHGVVCSMKENFGFIERADVVKEIFFH 434
TGD ++F I N+ G + A +I + GVVC+MKE FGFIER DVVKEIFFH
Sbjct: 123 TGDKINFVIDNNKHTGAVSARNIMLLKKKQ-ARCQGVVCAMKEAFGFIERGDVVKEIFFH 181
Query: 435 FSETKCK-EELTLGDDVEFIIQTRNGKK 515
+SE K E L GDDVEF I+ RNGK+
Sbjct: 182 YSEFKGDLETLQPGDDVEFTIKDRNGKE 209
Score = 55.6 bits (128), Expect = 2e-07
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Frame = +3
Query: 261 GDAVSFQIATNQRG--TLGACHIRFENPVHPVKYHGVVCSMKENFGFIERADVVKEIFFH 434
GD V F I+ QR + C + + G V ++K+NFGFIE A+ KEIFFH
Sbjct: 455 GDKVEFSISDKQRPGQQVATCVRLLGRNSNSKRLLGYVATLKDNFGFIETANHDKEIFFH 514
Query: 435 FSE-TKCKEELTLGDDVEFIIQTRNGKK 515
+SE + + L LGD VE+ + G K
Sbjct: 515 YSEFSGDVDSLELGDMVEYSLSKGKGNK 542
Score = 50.8 bits (116), Expect = 5e-06
Identities = 25/52 (48%), Positives = 34/52 (65%)
Frame = +2
Query: 509 KEVACNITKLPSGSVVFEDVSPEIMRGQVLKPLERGNLVRATQNDPLPGRIR 664
KEVA ++ LP G+V+FED+S E G V K + + + QNDPLPGRI+
Sbjct: 208 KEVATDVRLLPQGTVIFEDISIEHFEGTVTKVIPK--VPSKNQNDPLPGRIK 257
Score = 48.4 bits (110), Expect = 2e-05
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Frame = +3
Query: 261 GDAVSFQIATNQRGTLG-ACHIR-FENP---VHPVKYHGVVCSMKENFGFIERADVVKEI 425
GD V F I+T++R L A +I N + + GV+ +M++ FGFI+ D +
Sbjct: 282 GDHVRFNISTDRRDKLERATNIEVLSNTFQFTNEAREMGVIAAMRDGFGFIKCVDRDVRM 341
Query: 426 FFHFSETKCKEELTLGDDVEFII 494
FFHFSE +L + D+VEF +
Sbjct: 342 FFHFSEILDGNQLHIADEVEFTV 364
Score = 46.4 bits (105), Expect(2) = 2e-07
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = +1
Query: 1 EHLKIGDPVEFEMTYDRRTGKPIASTVTKIAPEVV 105
+ LK+GD VEFE++ DRRTGKPIA + KI E++
Sbjct: 61 QDLKVGDDVEFEVSSDRRTGKPIAVKLVKIKQEIL 95
Score = 39.9 bits (89), Expect = 0.008
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Frame = +3
Query: 261 GDAVSFQIATNQRGTLGACHIRFENPVHPVKYHGVVCSMKENFGFIE-RADVVKEIFFHF 437
G++V FQ+ LG + P++ V C +K+ FGFI K++FFH
Sbjct: 618 GESVKFQLCV-----LGQNAQTMAYNITPLRRATVEC-VKDQFGFINYEVGDSKKLFFHV 671
Query: 438 SETKCKEELTLGDDVEF--IIQTRNGK 512
E + EL GD+VEF I+ R GK
Sbjct: 672 KEVQDGIELQAGDEVEFSVILNQRTGK 698
Score = 37.9 bits (84), Expect = 0.034
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Frame = +3
Query: 360 GVVCSMKENFGFIERADVVKEIFFHFSETKCK-EELTLGDDVEFIIQT--RNGKKWHVTL 530
GV+ + ++GFI+ ++ +FFH S+ ++L +GDDVEF + + R GK V L
Sbjct: 28 GVIVKLLTSYGFIQCSERQARLFFHCSQYNGNLQDLKVGDDVEFEVSSDRRTGKPIAVKL 87
Query: 531 L 533
+
Sbjct: 88 V 88
Score = 28.3 bits (60), Expect(2) = 2e-07
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 202 ECFFLPYTKDDVEGNV 249
E F+L YT +DVEGNV
Sbjct: 104 EVFYLTYTPEDVEGNV 119
>AK022516-1|BAB14073.1| 767|Homo sapiens protein ( Homo sapiens
cDNA FLJ12454 fis, clone NT2RM1000555, highly similar to
UNR PROTEIN. ).
Length = 767
Score = 83.4 bits (197), Expect = 7e-16
Identities = 47/88 (53%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Frame = +3
Query: 258 TGDAVSFQIATNQR-GTLGACHIRFENPVHPVKYHGVVCSMKENFGFIERADVVKEIFFH 434
TGD ++F I N+ G + A +I + GVVC+MKE FGFIER DVVKEIFFH
Sbjct: 123 TGDKINFVIDNNKHTGAVSARNIMLLKKKQ-ARCQGVVCAMKEAFGFIERGDVVKEIFFH 181
Query: 435 FSETKCK-EELTLGDDVEFIIQTRNGKK 515
+SE K E L GDDVEF I+ RNGK+
Sbjct: 182 YSEFKGDLETLQPGDDVEFTIKDRNGKE 209
Score = 55.6 bits (128), Expect = 2e-07
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Frame = +3
Query: 261 GDAVSFQIATNQRG--TLGACHIRFENPVHPVKYHGVVCSMKENFGFIERADVVKEIFFH 434
GD V F I+ QR + C + + G V ++K+NFGFIE A+ KEIFFH
Sbjct: 455 GDKVEFSISDKQRPGQQVATCVRLLGRNSNSKRLLGYVATLKDNFGFIETANHDKEIFFH 514
Query: 435 FSE-TKCKEELTLGDDVEFIIQTRNGKK 515
+SE + + L LGD VE+ + G K
Sbjct: 515 YSEFSGDVDSLELGDMVEYSLSKGKGNK 542
Score = 50.8 bits (116), Expect = 5e-06
Identities = 25/52 (48%), Positives = 34/52 (65%)
Frame = +2
Query: 509 KEVACNITKLPSGSVVFEDVSPEIMRGQVLKPLERGNLVRATQNDPLPGRIR 664
KEVA ++ LP G+V+FED+S E G V K + + + QNDPLPGRI+
Sbjct: 208 KEVATDVRLLPQGTVIFEDISIEHFEGTVTKVIPK--VPSKNQNDPLPGRIK 257
Score = 48.4 bits (110), Expect = 2e-05
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Frame = +3
Query: 261 GDAVSFQIATNQRGTLG-ACHIR-FENP---VHPVKYHGVVCSMKENFGFIERADVVKEI 425
GD V F I+T++R L A +I N + + GV+ +M++ FGFI+ D +
Sbjct: 282 GDHVRFNISTDRRDKLERATNIEVLSNTFQFTNEAREMGVIAAMRDGFGFIKCVDRDVRM 341
Query: 426 FFHFSETKCKEELTLGDDVEFII 494
FFHFSE +L + D+VEF +
Sbjct: 342 FFHFSEILDGNQLHIADEVEFTV 364
Score = 46.4 bits (105), Expect(2) = 2e-07
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = +1
Query: 1 EHLKIGDPVEFEMTYDRRTGKPIASTVTKIAPEVV 105
+ LK+GD VEFE++ DRRTGKPIA + KI E++
Sbjct: 61 QDLKVGDDVEFEVSSDRRTGKPIAVKLVKIKQEIL 95
Score = 39.9 bits (89), Expect = 0.008
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Frame = +3
Query: 261 GDAVSFQIATNQRGTLGACHIRFENPVHPVKYHGVVCSMKENFGFIE-RADVVKEIFFHF 437
G++V FQ+ LG + P++ V C +K+ FGFI K++FFH
Sbjct: 618 GESVKFQLCV-----LGQNAQTMAYNITPLRRATVEC-VKDQFGFINYEVGDSKKLFFHV 671
Query: 438 SETKCKEELTLGDDVEF--IIQTRNGK 512
E + EL GD+VEF I+ R GK
Sbjct: 672 KEVQDGIELQAGDEVEFSVILNQRTGK 698
Score = 37.9 bits (84), Expect = 0.034
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Frame = +3
Query: 360 GVVCSMKENFGFIERADVVKEIFFHFSETKCK-EELTLGDDVEFIIQT--RNGKKWHVTL 530
GV+ + ++GFI+ ++ +FFH S+ ++L +GDDVEF + + R GK V L
Sbjct: 28 GVIVKLLTSYGFIQCSERQARLFFHCSQYNGNLQDLKVGDDVEFEVSSDRRTGKPIAVKL 87
Query: 531 L 533
+
Sbjct: 88 V 88
Score = 28.3 bits (60), Expect(2) = 2e-07
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 202 ECFFLPYTKDDVEGNV 249
E F+L YT +DVEGNV
Sbjct: 104 EVFYLTYTPEDVEGNV 119
>AF070542-1|AAC28634.1| 467|Homo sapiens unknown protein.
Length = 467
Score = 83.4 bits (197), Expect = 7e-16
Identities = 47/88 (53%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Frame = +3
Query: 258 TGDAVSFQIATNQR-GTLGACHIRFENPVHPVKYHGVVCSMKENFGFIERADVVKEIFFH 434
TGD ++F I N+ G + A +I + GVVC+MKE FGFIER DVVKEIFFH
Sbjct: 123 TGDKINFVIDNNKHTGAVSARNIMLLKKKQ-ARCQGVVCAMKEAFGFIERGDVVKEIFFH 181
Query: 435 FSETKCK-EELTLGDDVEFIIQTRNGKK 515
+SE K E L GDDVEF I+ RNGK+
Sbjct: 182 YSEFKGDLETLQPGDDVEFTIKDRNGKE 209
Score = 50.8 bits (116), Expect = 5e-06
Identities = 25/52 (48%), Positives = 34/52 (65%)
Frame = +2
Query: 509 KEVACNITKLPSGSVVFEDVSPEIMRGQVLKPLERGNLVRATQNDPLPGRIR 664
KEVA ++ LP G+V+FED+S E G V K + + + QNDPLPGRI+
Sbjct: 208 KEVATDVRLLPQGTVIFEDISIEHFEGTVTKVIPK--VPSKNQNDPLPGRIK 257
Score = 48.4 bits (110), Expect = 2e-05
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Frame = +3
Query: 261 GDAVSFQIATNQRGTLG-ACHIR-FENP---VHPVKYHGVVCSMKENFGFIERADVVKEI 425
GD V F I+T++R L A +I N + + GV+ +M++ FGFI+ D +
Sbjct: 282 GDHVRFNISTDRRDKLERATNIEVLSNTFQFTNEAREMGVIAAMRDGFGFIKCVDRDVRM 341
Query: 426 FFHFSETKCKEELTLGDDVEFII 494
FFHFSE +L + D+VEF +
Sbjct: 342 FFHFSEILDGNQLHIADEVEFTV 364
Score = 46.4 bits (105), Expect(2) = 3e-07
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = +1
Query: 1 EHLKIGDPVEFEMTYDRRTGKPIASTVTKIAPEVV 105
+ LK+GD VEFE++ DRRTGKPIA + KI E++
Sbjct: 61 QDLKVGDDVEFEVSSDRRTGKPIAVKLVKIKQEIL 95
Score = 36.7 bits (81), Expect = 0.079
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Frame = +3
Query: 360 GVVCSMKENFGFIERADVVKEIFFHFSETKCK-EELTLGDDVEFIIQT--RNGKKWHVTL 530
GV+ + ++GFI+ ++ +FFH S+ ++L +GDDVEF + + R GK V L
Sbjct: 28 GVIEKLLTSYGFIQCSERQARLFFHCSQYNGNLQDLKVGDDVEFEVSSDRRTGKPIAVKL 87
Query: 531 L 533
+
Sbjct: 88 V 88
Score = 28.3 bits (60), Expect(2) = 3e-07
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 202 ECFFLPYTKDDVEGNV 249
E F+L YT +DVEGNV
Sbjct: 104 EVFYLTYTPEDVEGNV 119
>AB020692-1|BAA74908.2| 826|Homo sapiens KIAA0885 protein protein.
Length = 826
Score = 83.4 bits (197), Expect = 7e-16
Identities = 47/88 (53%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Frame = +3
Query: 258 TGDAVSFQIATNQR-GTLGACHIRFENPVHPVKYHGVVCSMKENFGFIERADVVKEIFFH 434
TGD ++F I N+ G + A +I + GVVC+MKE FGFIER DVVKEIFFH
Sbjct: 182 TGDKINFVIDNNKHTGAVSARNIMLLKKKQ-ARCQGVVCAMKEAFGFIERGDVVKEIFFH 240
Query: 435 FSETKCK-EELTLGDDVEFIIQTRNGKK 515
+SE K E L GDDVEF I+ RNGK+
Sbjct: 241 YSEFKGDLETLQPGDDVEFTIKDRNGKE 268
Score = 66.1 bits (154), Expect = 1e-10
Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Frame = +1
Query: 1 EHLKIGDPVEFEMTYDRRTGKPIASTVTKIAPEVVLSXXXXXXXXXXXXXXXXS------ 162
+ LK+GD VEFE++ DRRTGKPIA + KI E++ S
Sbjct: 89 QDLKVGDDVEFEVSSDRRTGKPIAVKLVKIKQEILPEERMNGQVVCAVPHNLESKSPAAP 148
Query: 163 GDN-TGRISYETRGECFFLPYTKDDVEGNV 249
G + TG + YE GE F+L YT +DVEGNV
Sbjct: 149 GQSPTGSVCYERNGEVFYLTYTPEDVEGNV 178
Score = 55.6 bits (128), Expect = 2e-07
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Frame = +3
Query: 261 GDAVSFQIATNQRG--TLGACHIRFENPVHPVKYHGVVCSMKENFGFIERADVVKEIFFH 434
GD V F I+ QR + C + + G V ++K+NFGFIE A+ KEIFFH
Sbjct: 514 GDKVEFSISDKQRPGQQVATCVRLLGRNSNSKRLLGYVATLKDNFGFIETANHDKEIFFH 573
Query: 435 FSE-TKCKEELTLGDDVEFIIQTRNGKK 515
+SE + + L LGD VE+ + G K
Sbjct: 574 YSEFSGDVDSLELGDMVEYSLSKGKGNK 601
Score = 50.8 bits (116), Expect = 5e-06
Identities = 25/52 (48%), Positives = 34/52 (65%)
Frame = +2
Query: 509 KEVACNITKLPSGSVVFEDVSPEIMRGQVLKPLERGNLVRATQNDPLPGRIR 664
KEVA ++ LP G+V+FED+S E G V K + + + QNDPLPGRI+
Sbjct: 267 KEVATDVRLLPQGTVIFEDISIEHFEGTVTKVIPK--VPSKNQNDPLPGRIK 316
Score = 48.4 bits (110), Expect = 2e-05
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Frame = +3
Query: 261 GDAVSFQIATNQRGTLG-ACHIR-FENP---VHPVKYHGVVCSMKENFGFIERADVVKEI 425
GD V F I+T++R L A +I N + + GV+ +M++ FGFI+ D +
Sbjct: 341 GDHVRFNISTDRRDKLERATNIEVLSNTFQFTNEAREMGVIAAMRDGFGFIKCVDRDVRM 400
Query: 426 FFHFSETKCKEELTLGDDVEFII 494
FFHFSE +L + D+VEF +
Sbjct: 401 FFHFSEILDGNQLHIADEVEFTV 423
Score = 39.9 bits (89), Expect = 0.008
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Frame = +3
Query: 261 GDAVSFQIATNQRGTLGACHIRFENPVHPVKYHGVVCSMKENFGFIE-RADVVKEIFFHF 437
G++V FQ+ LG + P++ V C +K+ FGFI K++FFH
Sbjct: 677 GESVKFQLCV-----LGQNAQTMAYNITPLRRATVEC-VKDQFGFINYEVGDSKKLFFHV 730
Query: 438 SETKCKEELTLGDDVEF--IIQTRNGK 512
E + EL GD+VEF I+ R GK
Sbjct: 731 KEVQDGIELQAGDEVEFSVILNQRTGK 757
Score = 36.7 bits (81), Expect = 0.079
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Frame = +3
Query: 360 GVVCSMKENFGFIERADVVKEIFFHFSETKCK-EELTLGDDVEFIIQT--RNGKKWHVTL 530
GV+ + ++GFI+ ++ +FFH S+ ++L +GDDVEF + + R GK V L
Sbjct: 56 GVIEKLLTSYGFIQCSERQARLFFHCSQYNGNLQDLKVGDDVEFEVSSDRRTGKPIAVKL 115
Query: 531 L 533
+
Sbjct: 116 V 116
>AL050150-1|CAB43294.1| 369|Homo sapiens hypothetical protein
protein.
Length = 369
Score = 55.6 bits (128), Expect = 2e-07
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Frame = +3
Query: 261 GDAVSFQIATNQRG--TLGACHIRFENPVHPVKYHGVVCSMKENFGFIERADVVKEIFFH 434
GD V F I+ QR + C + + G V ++K+NFGFIE A+ KEIFFH
Sbjct: 57 GDKVEFSISDKQRPGQQVATCVRLLGRNSNSKRLLGYVATLKDNFGFIETANHDKEIFFH 116
Query: 435 FSE-TKCKEELTLGDDVEFIIQTRNGKK 515
+SE + + L LGD VE+ + G K
Sbjct: 117 YSEFSGDVDSLELGDMVEYSLSKGKGNK 144
Score = 39.9 bits (89), Expect = 0.008
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Frame = +3
Query: 261 GDAVSFQIATNQRGTLGACHIRFENPVHPVKYHGVVCSMKENFGFIE-RADVVKEIFFHF 437
G++V FQ+ LG + P++ V C +K+ FGFI K++FFH
Sbjct: 220 GESVKFQLCV-----LGQNAQTMAYNITPLRRATVEC-VKDQFGFINYEVGDSKKLFFHV 273
Query: 438 SETKCKEELTLGDDVEF--IIQTRNGK 512
E + EL GD+VEF I+ R GK
Sbjct: 274 KEVQDGIELQAGDEVEFSVILNQRTGK 300
>BC021692-1|AAH21692.1| 272|Homo sapiens CSDE1 protein protein.
Length = 272
Score = 44.4 bits (100), Expect = 4e-04
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +3
Query: 381 ENFGFIERADVVKEIFFHFSE-TKCKEELTLGDDVEFIIQTRNGKK 515
+NFGFIE A+ KEIFFH+SE + + L LGD VE+ + G K
Sbjct: 2 DNFGFIETANHDKEIFFHYSEFSGDVDSLELGDMVEYSLSKGKGNK 47
Score = 39.9 bits (89), Expect = 0.008
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Frame = +3
Query: 261 GDAVSFQIATNQRGTLGACHIRFENPVHPVKYHGVVCSMKENFGFIE-RADVVKEIFFHF 437
G++V FQ+ LG + P++ V C +K+ FGFI K++FFH
Sbjct: 123 GESVKFQLCV-----LGQNAQTMAYNITPLRRATVEC-VKDQFGFINYEVGDSKKLFFHV 176
Query: 438 SETKCKEELTLGDDVEF--IIQTRNGK 512
E + EL GD+VEF I+ R GK
Sbjct: 177 KEVQDGIELQAGDEVEFSVILNQRTGK 203
>AL110192-1|CAB53670.1| 171|Homo sapiens hypothetical protein
protein.
Length = 171
Score = 39.9 bits (89), Expect = 0.008
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Frame = +3
Query: 261 GDAVSFQIATNQRGTLGACHIRFENPVHPVKYHGVVCSMKENFGFIE-RADVVKEIFFHF 437
G++V FQ+ LG + P++ V C +K+ FGFI K++FFH
Sbjct: 22 GESVKFQLCV-----LGQNAQTMAYNITPLRRATVEC-VKDQFGFINYEVGDSKKLFFHV 75
Query: 438 SETKCKEELTLGDDVEF--IIQTRNGK 512
E + EL GD+VEF I+ R GK
Sbjct: 76 KEVQDGIELQAGDEVEFSVILNQRTGK 102
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,638,604
Number of Sequences: 237096
Number of extensions: 1963436
Number of successful extensions: 4013
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3989
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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