Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30994
         (789 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    25   0.61 
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    25   0.61 
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    25   0.80 
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    25   0.80 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              24   1.9  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    23   2.4  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    23   3.2  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   7.5  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                22   7.5  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   9.9  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 25.4 bits (53), Expect = 0.61
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 21  RTVPVGAWAGVNDGSALVKNEQRQRHARHR 110
           + VP   W GV  GSA    E+RQ +  H+
Sbjct: 157 KRVPPTNWVGVFGGSAWSWREERQAYYLHQ 186


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 25.4 bits (53), Expect = 0.61
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 21  RTVPVGAWAGVNDGSALVKNEQRQRHARHR 110
           + VP   W GV  GSA    E+RQ +  H+
Sbjct: 157 KRVPPTNWVGVFGGSAWSWREERQAYYLHQ 186


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 25.0 bits (52), Expect = 0.80
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +2

Query: 449 SFGRRLHGDLARIGRCSANGIVKGIGLSNFNKQQLERVLKEGTIK 583
           ++GRR++     +   S   I  G+G+SNF      R  + GTI+
Sbjct: 210 NYGRRINCTYVALYPSSVQVIALGVGVSNFLSS--TRTAETGTIR 252


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 25.0 bits (52), Expect = 0.80
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -3

Query: 217 RNDGIRHLWRALQHHGAACPWTSLRRSDQTQGMCPG 110
           RN G+ H  +  QH+GAA       +S Q Q    G
Sbjct: 14  RNGGVEHPHQHQQHYGAAVQVPQQTQSVQQQSQQAG 49


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -1

Query: 234  VNGGGIEMTVSDIYGAHYNITELLVLGLHYAVLIKPKVCAQADGGHVS 91
            VNGGG +     I+ A+ N+   +V  +   ++    +C     GH S
Sbjct: 1568 VNGGGNDEDPMKIFMANLNLVVPVVAAILVIIVAVIVICVLRGKGHGS 1615


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +2

Query: 656 GVVVMGYSPFG 688
           G+++M YSPFG
Sbjct: 280 GIIIMWYSPFG 290


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +2

Query: 608 HLQNVQKEMVEFCQSEGVVVMGYSPFGSLVARHGSTVEGPKIDDPV 745
           HL+N+ K ++EF  +   VV    P    + + GS  E PK  +P+
Sbjct: 4   HLKNIMKPLMEFSATLDTVV----PNSGELFKAGS-AEQPKEQEPL 44


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 30  PVGAWAGVNDGSALVKNEQRQRHARHR 110
           P   W  V  GSA   NE+R+++  H+
Sbjct: 160 PPNNWLSVFWGSAWQWNEERKQYYLHQ 186


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +2

Query: 635 VEFCQSEGVVVMGYSPFGSLVARHGSTVEGPKIDD 739
           ++FC + G+V     P   L++++G     PK+ D
Sbjct: 168 LQFCHNAGIVHADVKPKNILMSKNGQ----PKLTD 198


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
 Frame = -1

Query: 567 FSTLS--NCCLLKLDSPMPLTIPF 502
           FST S  N C++ LD    +T PF
Sbjct: 129 FSTASILNLCVISLDRYWAITDPF 152


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,754
Number of Sequences: 438
Number of extensions: 5378
Number of successful extensions: 24
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)