Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30992
         (404 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK126537-1|BAC86582.1|  467|Homo sapiens protein ( Homo sapiens ...    34   0.21 
AK124073-1|BAC85767.1|  536|Homo sapiens protein ( Homo sapiens ...    34   0.21 
AK123603-1|BAC85658.1|  143|Homo sapiens protein ( Homo sapiens ...    29   7.8  

>AK126537-1|BAC86582.1|  467|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44573 fis, clone UTERU3016789, moderately
           similar to SH3 domain-binding protein 3BP-2. ).
          Length = 467

 Score = 33.9 bits (74), Expect = 0.21
 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
 Frame = -2

Query: 361 INMCLESVSMARACLR-RLCTCAD*NV-VALSNYECVTCCRCAKLKILL*PKFA*SNLSL 188
           I+ C+        C R  LC C      V LS Y CV  C C ++++ +    + +  + 
Sbjct: 13  IHACVPVFLRVLVCARVHLCVCQSMCACVCLSAYPCVHVCVCQRIRVCMCVSVSLTMCAC 72

Query: 187 VVEC--RCVCSIMYVKA 143
           V +C   C+C  ++V A
Sbjct: 73  VCQCIRVCICVSVHVSA 89


>AK124073-1|BAC85767.1|  536|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42079 fis, clone SYNOV2021320, highly  similar
           to SH3 DOMAIN-BINDING PROTEIN 3BP-2. ).
          Length = 536

 Score = 33.9 bits (74), Expect = 0.21
 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
 Frame = -2

Query: 361 INMCLESVSMARACLR-RLCTCAD*NV-VALSNYECVTCCRCAKLKILL*PKFA*SNLSL 188
           I+ C+        C R  LC C      V LS Y CV  C C ++++ +    + +  + 
Sbjct: 13  IHACVPVFLRVLVCARVHLCVCQSMCACVCLSAYPCVHVCVCQRIRVCMCVSVSLTMCAC 72

Query: 187 VVEC--RCVCSIMYVKA 143
           V +C   C+C  ++V A
Sbjct: 73  VCQCIRVCICVSVHVSA 89


>AK123603-1|BAC85658.1|  143|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41609 fis, clone CTONG3001560. ).
          Length = 143

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
 Frame = -2

Query: 340 VSMARACLRRLCTCAD*NV---VALSNYECVTCCRCAKLKILL*PKFA*SNLSLVVECRC 170
           V +   CLR  C CA   +   V +  + CV  C C ++ +L       +++ LV  C C
Sbjct: 40  VCLVTVCLRLFCVCAHMCLVPCVCVCAWACVFSC-CVRVLVLC----VCTHVCLVTVCAC 94

Query: 169 VCSI 158
            C +
Sbjct: 95  ACFV 98


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,757,771
Number of Sequences: 237096
Number of extensions: 1017915
Number of successful extensions: 1469
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1469
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2985693880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)