Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30991
         (802 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L21758-1|AAA16827.1|  264|Caenorhabditis elegans osteonectin pro...    94   9e-20
AF036692-3|AAB88325.1|  264|Caenorhabditis elegans Osteonectin (...    94   9e-20
Z72513-1|CAA96669.1|  260|Caenorhabditis elegans Hypothetical pr...    35   0.059
Z83227-2|CAB05727.1|  270|Caenorhabditis elegans Hypothetical pr...    28   8.9  

>L21758-1|AAA16827.1|  264|Caenorhabditis elegans osteonectin
           protein.
          Length = 264

 Score = 94.3 bits (224), Expect = 9e-20
 Identities = 37/80 (46%), Positives = 54/80 (67%)
 Frame = +2

Query: 14  VCTNFNETWQSDCEVYRQRCLCLDNSDQCRGPQYHHVQIEYYGTCREMPDCTESEMSDFP 193
           VC N N+T+ S C++YR+RCLC   S +C       V +EY G C+++ +CTE  M+ FP
Sbjct: 91  VCANNNQTFTSLCDLYRERCLCKRKSKECSKAFNAKVHLEYLGECKKLDECTEEHMAQFP 150

Query: 194 RRMRDWLFNIMRDMAERREL 253
            RM DWLF +M+++ +RREL
Sbjct: 151 ERMADWLFQVMKELKKRREL 170



 Score = 91.1 bits (216), Expect = 8e-19
 Identities = 40/89 (44%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
 Frame = +1

Query: 247 RADPHYLKMER---EAESNLTRRWANAAIWKWCDLDAQTNDRFVSRHELFPIRAPLMALE 417
           R + H L+ E    EAE++  ++     IWK+C+LD + +D+ VS HEL PI AP++ +E
Sbjct: 167 RRELHKLEWEELLSEAENDDEKKHVYPVIWKFCELDTKPHDKSVSHHELIPITAPVIPME 226

Query: 418 HCIAPFLDRCDADDDHRVTLAEWGKCLEL 504
            CI PFL+ CDA++D  +++ EWGKCL L
Sbjct: 227 SCIKPFLEGCDANNDGNISIKEWGKCLGL 255


>AF036692-3|AAB88325.1|  264|Caenorhabditis elegans Osteonectin
           (sparc) related protein1 protein.
          Length = 264

 Score = 94.3 bits (224), Expect = 9e-20
 Identities = 37/80 (46%), Positives = 54/80 (67%)
 Frame = +2

Query: 14  VCTNFNETWQSDCEVYRQRCLCLDNSDQCRGPQYHHVQIEYYGTCREMPDCTESEMSDFP 193
           VC N N+T+ S C++YR+RCLC   S +C       V +EY G C+++ +CTE  M+ FP
Sbjct: 91  VCANNNQTFTSLCDLYRERCLCKRKSKECSKAFNAKVHLEYLGECKKLDECTEEHMAQFP 150

Query: 194 RRMRDWLFNIMRDMAERREL 253
            RM DWLF +M+++ +RREL
Sbjct: 151 ERMADWLFQVMKELKKRREL 170



 Score = 91.1 bits (216), Expect = 8e-19
 Identities = 40/89 (44%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
 Frame = +1

Query: 247 RADPHYLKMER---EAESNLTRRWANAAIWKWCDLDAQTNDRFVSRHELFPIRAPLMALE 417
           R + H L+ E    EAE++  ++     IWK+C+LD + +D+ VS HEL PI AP++ +E
Sbjct: 167 RRELHKLEWEELLSEAENDDEKKHVYPVIWKFCELDTKPHDKSVSHHELIPITAPVIPME 226

Query: 418 HCIAPFLDRCDADDDHRVTLAEWGKCLEL 504
            CI PFL+ CDA++D  +++ EWGKCL L
Sbjct: 227 SCIKPFLEGCDANNDGNISIKEWGKCLGL 255


>Z72513-1|CAA96669.1|  260|Caenorhabditis elegans Hypothetical
           protein T04F3.2 protein.
          Length = 260

 Score = 35.1 bits (77), Expect = 0.059
 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
 Frame = +1

Query: 292 NLTRRWANAAI-WKWCDLDAQTNDRFVSRHELFPIRAPLMA---LEHCIAPFLDRCDADD 459
           N T+   ++AI WK+  L+   N+  + R E  P ++ L+    +  C       CD + 
Sbjct: 164 NATKVSRDSAIRWKFNQLNINHNN-VLERSEWKPFKSVLLEWKNVRQCSRNLFKTCDLNK 222

Query: 460 DHRVTLAEWGKCL 498
           D ++T  EW KC+
Sbjct: 223 DRKLTFDEWRKCI 235


>Z83227-2|CAB05727.1|  270|Caenorhabditis elegans Hypothetical
           protein F45B8.2 protein.
          Length = 270

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = -3

Query: 563 QIVFSVFIEIVAALLHFQPSSSRHLPHSARVTRWSSS 453
           Q   S  I I+ + +H   SSS  LP S  V RW  S
Sbjct: 99  QNAVSRVINILRSKVHLMFSSSNELPSSEDVERWKKS 135


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,674,479
Number of Sequences: 27780
Number of extensions: 364579
Number of successful extensions: 962
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)