Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30991
         (802 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    24   1.4  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    24   1.9  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    24   1.9  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   7.6  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   7.6  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +2

Query: 281 RRNQTSRVVGPMPLYGNGAIWTLRPMIDSCPVTSCSP 391
           RR ++ R+ G M +    A+W L   I S P+  C P
Sbjct: 148 RRRRSKRLAGLMIV----AVWVLAGAITSPPLLGCFP 180


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 262 NEGQLSTFSHVAHDVKKPVPHATGEVRH 179
           NE  +++FSH + DVK  +  ATG   H
Sbjct: 272 NELLIASFSHRSIDVKDGIVLATGITVH 299


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 262 NEGQLSTFSHVAHDVKKPVPHATGEVRH 179
           NE  +++FSH + DVK  +  ATG   H
Sbjct: 272 NELLIASFSHRSIDVKDGIVLATGITVH 299


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 131 EYYGTCREMPDCTESEMSDFPRRMRD 208
           +Y    + MPD  E+E+SD    +RD
Sbjct: 74  QYARVQQSMPDGWETEISDQMLELRD 99


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +2

Query: 8   RMVCTNFNETWQSDCEVYRQRC 73
           R VC +  + + + CE++R  C
Sbjct: 115 RPVCASNGKIYANHCELHRAAC 136


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,883
Number of Sequences: 438
Number of extensions: 4533
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)