Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30979
         (363 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1682|AAN09297.1|  266|Drosophila melanogaster CG4139-PB...    41   6e-04
AE014298-1681|AAF48091.2|  266|Drosophila melanogaster CG4139-PA...    41   6e-04
AY061609-1|AAL29157.1|  266|Drosophila melanogaster SD07475p pro...    40   7e-04
AY038185-1|AAK72697.1|  266|Drosophila melanogaster Karl protein.      40   7e-04

>AE014298-1682|AAN09297.1|  266|Drosophila melanogaster CG4139-PB,
           isoform B protein.
          Length = 266

 Score = 40.7 bits (91), Expect = 6e-04
 Identities = 21/64 (32%), Positives = 35/64 (54%)
 Frame = +3

Query: 30  RYLTAFVLSRTTKLQKKVMAYLRDKLPRFEVDINYVFXIPHDXCXVXPPNPNFGPLMLDA 209
           RYL+A +LSR T L    +++LR KLP+ ++D +++F I  + C     +    PL    
Sbjct: 173 RYLSALLLSRKTSLADNEISFLRGKLPQ-DIDTSFMFNIGQESCDNLMESSRDDPLAYVV 231

Query: 210 QSKK 221
             +K
Sbjct: 232 NGRK 235


>AE014298-1681|AAF48091.2|  266|Drosophila melanogaster CG4139-PA,
           isoform A protein.
          Length = 266

 Score = 40.7 bits (91), Expect = 6e-04
 Identities = 21/64 (32%), Positives = 35/64 (54%)
 Frame = +3

Query: 30  RYLTAFVLSRTTKLQKKVMAYLRDKLPRFEVDINYVFXIPHDXCXVXPPNPNFGPLMLDA 209
           RYL+A +LSR T L    +++LR KLP+ ++D +++F I  + C     +    PL    
Sbjct: 173 RYLSALLLSRKTSLADNEISFLRGKLPQ-DIDTSFMFNIGQESCDNLMESSRDDPLAYVV 231

Query: 210 QSKK 221
             +K
Sbjct: 232 NGRK 235


>AY061609-1|AAL29157.1|  266|Drosophila melanogaster SD07475p
           protein.
          Length = 266

 Score = 40.3 bits (90), Expect = 7e-04
 Identities = 18/44 (40%), Positives = 30/44 (68%)
 Frame = +3

Query: 30  RYLTAFVLSRTTKLQKKVMAYLRDKLPRFEVDINYVFXIPHDXC 161
           RYL+A +LSR T L    +++LR KLP+ ++D +++F I  + C
Sbjct: 173 RYLSALLLSRKTSLADNEISFLRGKLPQ-DIDTSFMFNIGQESC 215


>AY038185-1|AAK72697.1|  266|Drosophila melanogaster Karl protein.
          Length = 266

 Score = 40.3 bits (90), Expect = 7e-04
 Identities = 18/44 (40%), Positives = 30/44 (68%)
 Frame = +3

Query: 30  RYLTAFVLSRTTKLQKKVMAYLRDKLPRFEVDINYVFXIPHDXC 161
           RYL+A +LSR T L    +++LR KLP+ ++D +++F I  + C
Sbjct: 173 RYLSALLLSRKTSLADNEISFLRGKLPQ-DIDTSFMFNIGQESC 215


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,653,155
Number of Sequences: 53049
Number of extensions: 269467
Number of successful extensions: 530
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 530
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 922092336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)