Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30979
         (363 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021171-3|CAB54258.1|  749|Caenorhabditis elegans Hypothetical ...    29   1.3  
AL021171-2|CAA15957.1|  747|Caenorhabditis elegans Hypothetical ...    29   1.3  
Z82057-4|CAB61024.2|  370|Caenorhabditis elegans Hypothetical pr...    28   1.7  
Z81119-10|CAB61032.2|  370|Caenorhabditis elegans Hypothetical p...    28   1.7  
L39925-1|AAA98782.1|  370|Caenorhabditis elegans cathepsin B-lik...    28   1.7  
L39890-1|AAA98788.1|  370|Caenorhabditis elegans cathepsin B-lik...    28   1.7  
Z78413-8|CAB01665.2|  541|Caenorhabditis elegans Hypothetical pr...    28   2.3  
Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical pr...    27   5.3  

>AL021171-3|CAB54258.1|  749|Caenorhabditis elegans Hypothetical
           protein H04D03.2b protein.
          Length = 749

 Score = 28.7 bits (61), Expect = 1.3
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +2

Query: 77  ESDGVPARQTAKIRSGHQLCVRDPSRRXXRXTPKP*LR 190
           E DG PA    + R+ H++ + +PS    R  PKP +R
Sbjct: 313 EDDGCPAHLIGEYRNFHKILLEEPS--FYRPLPKPEIR 348


>AL021171-2|CAA15957.1|  747|Caenorhabditis elegans Hypothetical
           protein H04D03.2a protein.
          Length = 747

 Score = 28.7 bits (61), Expect = 1.3
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +2

Query: 77  ESDGVPARQTAKIRSGHQLCVRDPSRRXXRXTPKP*LR 190
           E DG PA    + R+ H++ + +PS    R  PKP +R
Sbjct: 313 EDDGCPAHLIGEYRNFHKILLEEPS--FYRPLPKPEIR 348


>Z82057-4|CAB61024.2|  370|Caenorhabditis elegans Hypothetical
           protein T10H4.12 protein.
          Length = 370

 Score = 28.3 bits (60), Expect = 1.7
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 40  PHSFCPGQPNCRRK*WRTCETNCQDS 117
           P+SF P   NC      +C+T CQ S
Sbjct: 192 PYSFAPCTKNCPESTTPSCKTTCQSS 217


>Z81119-10|CAB61032.2|  370|Caenorhabditis elegans Hypothetical
           protein T10H4.12 protein.
          Length = 370

 Score = 28.3 bits (60), Expect = 1.7
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 40  PHSFCPGQPNCRRK*WRTCETNCQDS 117
           P+SF P   NC      +C+T CQ S
Sbjct: 192 PYSFAPCTKNCPESTTPSCKTTCQSS 217


>L39925-1|AAA98782.1|  370|Caenorhabditis elegans cathepsin B-like
           cysteine proteinaseprotein.
          Length = 370

 Score = 28.3 bits (60), Expect = 1.7
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 40  PHSFCPGQPNCRRK*WRTCETNCQDS 117
           P+SF P   NC      +C+T CQ S
Sbjct: 192 PYSFAPCTKNCPESTTPSCKTTCQSS 217


>L39890-1|AAA98788.1|  370|Caenorhabditis elegans cathepsin B-like
           cysteine proteinaseprotein.
          Length = 370

 Score = 28.3 bits (60), Expect = 1.7
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 40  PHSFCPGQPNCRRK*WRTCETNCQDS 117
           P+SF P   NC      +C+T CQ S
Sbjct: 192 PYSFAPCTKNCPESTTPSCKTTCQSS 217


>Z78413-8|CAB01665.2|  541|Caenorhabditis elegans Hypothetical
           protein T01C3.8 protein.
          Length = 541

 Score = 27.9 bits (59), Expect = 2.3
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +3

Query: 12  GQTEGXRYLTAFVLSRTTKLQKKVMAYLRDKLPRFEVDINY 134
           G+ +  R     V++RTT+   +VM YLR K+    V++ Y
Sbjct: 363 GRRDKPRRERILVITRTTETCIRVMMYLRLKMQTLAVNLRY 403


>Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical
           protein M02G9.1 protein.
          Length = 909

 Score = 26.6 bits (56), Expect = 5.3
 Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
 Frame = +2

Query: 68  TAEESDGVPA-RQTAKIRSGHQLCVRDPSRRXXRXTPKP*LRTLDAGCPEQETDKTICQ 241
           T  ++   PA +Q  ++ S  QLC    + +  +    P  +T   GC +   D  +CQ
Sbjct: 504 TTTQAPPAPAPQQQQQLASCPQLCQPQCTSQCVQQQQCPCQQTCQTGCQQHNPDARVCQ 562


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,513,720
Number of Sequences: 27780
Number of extensions: 135906
Number of successful extensions: 316
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 316
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 503476126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)