BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30977
(579 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X94613-1|CAA64319.1| 190|Drosophila melanogaster ribosomal prot... 149 4e-36
BT022718-1|AAY55134.1| 190|Drosophila melanogaster RE74350p pro... 149 4e-36
AE014134-2010|AAF53049.1| 190|Drosophila melanogaster CG6141-PB... 149 4e-36
AE014134-2009|AAF53048.2| 190|Drosophila melanogaster CG6141-PA... 149 4e-36
BT011112-1|AAR82779.1| 2851|Drosophila melanogaster LD31436p pro... 32 0.65
AF425651-1|AAL65911.1| 4001|Drosophila melanogaster multiple ank... 32 0.65
AE014297-3507|AAO41601.1| 4001|Drosophila melanogaster CG33106-P... 32 0.65
AE014297-3506|AAO41600.1| 4001|Drosophila melanogaster CG33106-P... 32 0.65
AY060984-1|AAL28532.1| 730|Drosophila melanogaster GM14169p pro... 31 0.85
AF123262-1|AAD22056.1| 730|Drosophila melanogaster TXBP181-like... 31 0.85
AE013599-845|AAF58955.1| 730|Drosophila melanogaster CG2072-PA ... 31 0.85
BT023113-1|AAY55529.1| 423|Drosophila melanogaster IP03677p pro... 28 7.9
>X94613-1|CAA64319.1| 190|Drosophila melanogaster ribosomal protein
L9 protein.
Length = 190
Score = 149 bits (360), Expect = 4e-36
Identities = 70/84 (83%), Positives = 76/84 (90%)
Frame = +1
Query: 256 TKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDEL 435
T GFQYKMRAVYAHFPINCVT+E N++IEIRNFLGEKYIRRV+MAPGVTVVNS QKDEL
Sbjct: 83 TFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVEMAPGVTVVNSTAQKDEL 142
Query: 436 IIEGNSLEDVSSSXALIQQSTTVK 507
I+EGN +E VS S ALIQQSTTVK
Sbjct: 143 IVEGNDIESVSGSAALIQQSTTVK 166
Score = 113 bits (272), Expect = 2e-25
Identities = 53/81 (65%), Positives = 64/81 (79%)
Frame = +2
Query: 11 MKQIVANXKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 190
M+ I +N VKIP + VK+R+VT+ G RG LKR FKHLA+D+ M + R LKVEKWFG
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRTFKHLALDMYMPDKRTLKVEKWFG 60
Query: 191 SKKELAAVRTVCSHVENMIKG 253
+KKELAAVRTVCSH+ENMIKG
Sbjct: 61 TKKELAAVRTVCSHIENMIKG 81
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +3
Query: 504 QDKDIRXFLDGLYVSEKTTVV 566
++KDIR FLDGLYVSEKTTVV
Sbjct: 166 KNKDIRKFLDGLYVSEKTTVV 186
>BT022718-1|AAY55134.1| 190|Drosophila melanogaster RE74350p
protein.
Length = 190
Score = 149 bits (360), Expect = 4e-36
Identities = 70/84 (83%), Positives = 76/84 (90%)
Frame = +1
Query: 256 TKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDEL 435
T GFQYKMRAVYAHFPINCVT+E N++IEIRNFLGEKYIRRV+MAPGVTVVNS QKDEL
Sbjct: 83 TFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVEMAPGVTVVNSTAQKDEL 142
Query: 436 IIEGNSLEDVSSSXALIQQSTTVK 507
I+EGN +E VS S ALIQQSTTVK
Sbjct: 143 IVEGNDIESVSGSAALIQQSTTVK 166
Score = 113 bits (273), Expect = 1e-25
Identities = 53/81 (65%), Positives = 65/81 (80%)
Frame = +2
Query: 11 MKQIVANXKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 190
M+ I +N VKIP + VK+R+VT+ G RG LKR+FKHLA+D+ M + R LKVEKWFG
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFG 60
Query: 191 SKKELAAVRTVCSHVENMIKG 253
+KKELAAVRTVCSH+ENMIKG
Sbjct: 61 TKKELAAVRTVCSHIENMIKG 81
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +3
Query: 504 QDKDIRXFLDGLYVSEKTTVV 566
++KDIR FLDGLYVSEKTTVV
Sbjct: 166 KNKDIRKFLDGLYVSEKTTVV 186
>AE014134-2010|AAF53049.1| 190|Drosophila melanogaster CG6141-PB,
isoform B protein.
Length = 190
Score = 149 bits (360), Expect = 4e-36
Identities = 70/84 (83%), Positives = 76/84 (90%)
Frame = +1
Query: 256 TKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDEL 435
T GFQYKMRAVYAHFPINCVT+E N++IEIRNFLGEKYIRRV+MAPGVTVVNS QKDEL
Sbjct: 83 TFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVEMAPGVTVVNSTAQKDEL 142
Query: 436 IIEGNSLEDVSSSXALIQQSTTVK 507
I+EGN +E VS S ALIQQSTTVK
Sbjct: 143 IVEGNDIESVSGSAALIQQSTTVK 166
Score = 113 bits (273), Expect = 1e-25
Identities = 53/81 (65%), Positives = 65/81 (80%)
Frame = +2
Query: 11 MKQIVANXKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 190
M+ I +N VKIP + VK+R+VT+ G RG LKR+FKHLA+D+ M + R LKVEKWFG
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFG 60
Query: 191 SKKELAAVRTVCSHVENMIKG 253
+KKELAAVRTVCSH+ENMIKG
Sbjct: 61 TKKELAAVRTVCSHIENMIKG 81
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +3
Query: 504 QDKDIRXFLDGLYVSEKTTVV 566
++KDIR FLDGLYVSEKTTVV
Sbjct: 166 KNKDIRKFLDGLYVSEKTTVV 186
>AE014134-2009|AAF53048.2| 190|Drosophila melanogaster CG6141-PA,
isoform A protein.
Length = 190
Score = 149 bits (360), Expect = 4e-36
Identities = 70/84 (83%), Positives = 76/84 (90%)
Frame = +1
Query: 256 TKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDEL 435
T GFQYKMRAVYAHFPINCVT+E N++IEIRNFLGEKYIRRV+MAPGVTVVNS QKDEL
Sbjct: 83 TFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVEMAPGVTVVNSTAQKDEL 142
Query: 436 IIEGNSLEDVSSSXALIQQSTTVK 507
I+EGN +E VS S ALIQQSTTVK
Sbjct: 143 IVEGNDIESVSGSAALIQQSTTVK 166
Score = 113 bits (273), Expect = 1e-25
Identities = 53/81 (65%), Positives = 65/81 (80%)
Frame = +2
Query: 11 MKQIVANXKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 190
M+ I +N VKIP + VK+R+VT+ G RG LKR+FKHLA+D+ M + R LKVEKWFG
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFG 60
Query: 191 SKKELAAVRTVCSHVENMIKG 253
+KKELAAVRTVCSH+ENMIKG
Sbjct: 61 TKKELAAVRTVCSHIENMIKG 81
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +3
Query: 504 QDKDIRXFLDGLYVSEKTTVV 566
++KDIR FLDGLYVSEKTTVV
Sbjct: 166 KNKDIRKFLDGLYVSEKTTVV 186
>BT011112-1|AAR82779.1| 2851|Drosophila melanogaster LD31436p protein.
Length = 2851
Score = 31.9 bits (69), Expect = 0.65
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = -2
Query: 467 ETSSKELPSMINSSFCLGELTTVTPGA 387
E+SSK LP+ SS LG+ +TV+PGA
Sbjct: 2688 ESSSKSLPAAQKSSTTLGKSSTVSPGA 2714
>AF425651-1|AAL65911.1| 4001|Drosophila melanogaster multiple ankyrin
repeat singleKH domain protein protein.
Length = 4001
Score = 31.9 bits (69), Expect = 0.65
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = -2
Query: 467 ETSSKELPSMINSSFCLGELTTVTPGA 387
E+SSK LP+ SS LG+ +TV+PGA
Sbjct: 3252 ESSSKSLPAAQKSSTTLGKSSTVSPGA 3278
>AE014297-3507|AAO41601.1| 4001|Drosophila melanogaster CG33106-PB,
isoform B protein.
Length = 4001
Score = 31.9 bits (69), Expect = 0.65
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = -2
Query: 467 ETSSKELPSMINSSFCLGELTTVTPGA 387
E+SSK LP+ SS LG+ +TV+PGA
Sbjct: 3252 ESSSKSLPAAQKSSTTLGKSSTVSPGA 3278
>AE014297-3506|AAO41600.1| 4001|Drosophila melanogaster CG33106-PA,
isoform A protein.
Length = 4001
Score = 31.9 bits (69), Expect = 0.65
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = -2
Query: 467 ETSSKELPSMINSSFCLGELTTVTPGA 387
E+SSK LP+ SS LG+ +TV+PGA
Sbjct: 3252 ESSSKSLPAAQKSSTTLGKSSTVSPGA 3278
>AY060984-1|AAL28532.1| 730|Drosophila melanogaster GM14169p
protein.
Length = 730
Score = 31.5 bits (68), Expect = 0.85
Identities = 16/58 (27%), Positives = 33/58 (56%)
Frame = +2
Query: 170 KVEKWFGSKKELAAVRTVCSHVENMIKGELKASNTRCVLCMLTSPLTVSPLRVIQLLR 343
++E+ G++ E A+++ H+E +K +K + C+ L SP+ + R+ QLL+
Sbjct: 316 RLEREEGARAEAASLQVKLLHMEQELKEWVKVAQDHCLANTLVSPMALRS-RIEQLLK 372
>AF123262-1|AAD22056.1| 730|Drosophila melanogaster TXBP181-like
protein protein.
Length = 730
Score = 31.5 bits (68), Expect = 0.85
Identities = 16/58 (27%), Positives = 33/58 (56%)
Frame = +2
Query: 170 KVEKWFGSKKELAAVRTVCSHVENMIKGELKASNTRCVLCMLTSPLTVSPLRVIQLLR 343
++E+ G++ E A+++ H+E +K +K + C+ L SP+ + R+ QLL+
Sbjct: 316 RLEREEGARAEAASLQVKLLHMEQELKEWVKVAQDHCLANTLVSPMALRS-RIEQLLK 372
>AE013599-845|AAF58955.1| 730|Drosophila melanogaster CG2072-PA
protein.
Length = 730
Score = 31.5 bits (68), Expect = 0.85
Identities = 16/58 (27%), Positives = 33/58 (56%)
Frame = +2
Query: 170 KVEKWFGSKKELAAVRTVCSHVENMIKGELKASNTRCVLCMLTSPLTVSPLRVIQLLR 343
++E+ G++ E A+++ H+E +K +K + C+ L SP+ + R+ QLL+
Sbjct: 316 RLEREEGARAEAASLQVKLLHMEQELKEWVKVAQDHCLANTLVSPMALRS-RIEQLLK 372
>BT023113-1|AAY55529.1| 423|Drosophila melanogaster IP03677p
protein.
Length = 423
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -2
Query: 227 NRLSSRRQAPFWIRTISQPSGDE-GLPCECQ 138
+R RR+ W RT+ QP G G CECQ
Sbjct: 390 SRCQRRRRWCCWWRTLRQPGGRRPGRLCECQ 420
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,220,518
Number of Sequences: 53049
Number of extensions: 548055
Number of successful extensions: 1238
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1238
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2296745289
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -