Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30976
         (610 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    24   1.3  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    24   1.3  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    24   1.3  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    24   1.3  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    22   5.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   7.1  
AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.              21   9.4  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 511 NINSKLTPGTHKKPSIVANKFT 576
           N N + TP +H KPS++ ++ T
Sbjct: 259 NHNERSTPRSHAKPSLIDDEPT 280


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 511 NINSKLTPGTHKKPSIVANKFT 576
           N N + TP +H KPS++ ++ T
Sbjct: 259 NHNERSTPRSHAKPSLIDDEPT 280


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 511 NINSKLTPGTHKKPSIVANKFT 576
           N N + TP +H KPS++ ++ T
Sbjct: 259 NHNERSTPRSHAKPSLIDDEPT 280


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -2

Query: 567 VRNNRWFFVCAWCE 526
           V  NRW F   WC+
Sbjct: 107 VLENRWLFTTDWCD 120


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 554 DGFLCVPGVSLLLIFSIKQIN 492
           DG +CV  VS  ++ + ++IN
Sbjct: 73  DGLMCVEKVSTTIVPTTQEIN 93


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 517 NSKLTPGTHKKPSIVANKFTNK 582
           NS+L PGT+K     +   T++
Sbjct: 235 NSRLEPGTNKNGKFFSRSSTSR 256


>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 120 RCSESTWMSSALDEESCG 67
           RC E+ +  S L  E+CG
Sbjct: 31  RCPEALFQPSFLGMEACG 48


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,869
Number of Sequences: 438
Number of extensions: 3942
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)