Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30975
         (614 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.            23   3.1  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   5.5  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   5.5  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   5.5  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   5.5  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   9.6  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   9.6  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    21   9.6  

>AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.
          Length = 122

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +3

Query: 399 YDEDLLLGSRVLVFCMSADAP 461
           ++ D +LG ++  FCM+   P
Sbjct: 30  FELDYMLGRKITFFCMATGFP 50


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 66  GCIVGAFQPKDRVTERL 16
           GC+VG + P   +  RL
Sbjct: 195 GCLVGTWSPDPAINRRL 211



 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 555 PLTAKXXEGLQSRPTLLV 608
           PLTA   EG+QS+   L+
Sbjct: 594 PLTALSEEGVQSKDLALI 611


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 66  GCIVGAFQPKDRVTERL 16
           GC+VG + P   +  RL
Sbjct: 195 GCLVGTWSPDPAINRRL 211



 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 555 PLTAKXXEGLQSRPTLLV 608
           PLTA   EG+QS+   L+
Sbjct: 594 PLTALSEEGVQSKDLALI 611


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 66  GCIVGAFQPKDRVTERL 16
           GC+VG + P   +  RL
Sbjct: 195 GCLVGTWSPDPAINRRL 211



 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 555 PLTAKXXEGLQSRPTLLV 608
           PLTA   EG+QS+   L+
Sbjct: 594 PLTALSEEGVQSKDLALI 611


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -3

Query: 213 EFGDGRAKRFKVDKVYGGQAPFRVLFRRSR 124
           +FG   +    VD VYG  A F  L RR++
Sbjct: 81  DFGYDISNFTDVDPVYGTLADFDRLVRRAK 110


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +1

Query: 505 GRQHRAHRSTHGQEVRARLQRRXVKDYN 588
           GR +R H++ +   +  R+Q+    D+N
Sbjct: 368 GRMNRIHKNEYMLALSNRMQKIVNNDFN 395


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 73  AHRLHRRRVSTEGSCDRATV 14
           A+ LH  R S E SC++  +
Sbjct: 437 AYSLHHVRSSRESSCEQTYI 456


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 372 HPRRRYSSQRRLVW 331
           HP+ R   Q+RL W
Sbjct: 332 HPKYRLELQKRLPW 345


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,094
Number of Sequences: 438
Number of extensions: 3016
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)