Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30974
(677 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 88 6e-18
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 88 6e-18
Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z54284-4|CAA91061.1| 1001|Caenorhabditis elegans Hypothetical pr... 29 2.3
AF025460-2|AAF02169.3| 545|Caenorhabditis elegans Prion-like-(q... 29 2.3
AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical ... 29 2.3
U41556-9|AAK39192.1| 692|Caenorhabditis elegans Potassium chann... 29 3.0
U41556-8|AAM51518.1| 740|Caenorhabditis elegans Potassium chann... 29 3.0
AY572974-1|AAT77227.1| 692|Caenorhabditis elegans KQT-1 potassi... 29 3.0
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 4.0
U61952-7|AAB03164.1| 1042|Caenorhabditis elegans Abnormal cell l... 29 4.0
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 29 4.0
AF163018-1|AAD49323.1| 1042|Caenorhabditis elegans bromodomain p... 29 4.0
Z69661-2|CAA93494.1| 925|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z49909-16|CAB60995.1| 418|Caenorhabditis elegans Hypothetical p... 28 7.0
AC025726-25|AAK73927.2| 409|Caenorhabditis elegans Hypothetical... 28 7.0
U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical pr... 27 9.3
U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical pr... 27 9.3
AF016445-11|AAC69054.1| 248|Caenorhabditis elegans Pharyngeal g... 27 9.3
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 87.8 bits (208), Expect = 6e-18
Identities = 38/89 (42%), Positives = 54/89 (60%)
Frame = +3
Query: 3 RFFEREVAAGASLLQQVLHDLRNVMLICQSEMKQTNETRAMVGSLVRGMLPASWRRYAVA 182
RFFEREV G+ LL+ + DL + +C++E KQ NETRA+ SL +G +P W+RY V
Sbjct: 4348 RFFEREVNLGSQLLKDIRRDLNEISAVCRAEKKQNNETRALAASLQKGEVPTGWKRYTVP 4407
Query: 183 RGCTVQQWIGDFAQRVTQLAEVADQSLLR 269
R TV W+ D +R+ QL + L+
Sbjct: 4408 REVTVMDWMTDLNERLKQLIRIGGADNLK 4436
Score = 65.3 bits (152), Expect = 4e-11
Identities = 36/78 (46%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Frame = +2
Query: 263 AKRLQNVPVWLGGLLNPEAYITATRQCVAQANSWSLEELHLQVTIPDPGAPTENAQTEWS 442
A L+ WLGG +PEAYITATRQ VAQAN+WSLE+L+L + I T++
Sbjct: 4432 ADNLKRETFWLGGTFSPEAYITATRQQVAQANTWSLEQLNLHIHI----GRTDSTDV--- 4484
Query: 443 FSVTGLKLQGA-TVKGNR 493
F ++G+ ++GA +V GN+
Sbjct: 4485 FRISGIDIRGAKSVGGNK 4502
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 87.8 bits (208), Expect = 6e-18
Identities = 38/89 (42%), Positives = 54/89 (60%)
Frame = +3
Query: 3 RFFEREVAAGASLLQQVLHDLRNVMLICQSEMKQTNETRAMVGSLVRGMLPASWRRYAVA 182
RFFEREV G+ LL+ + DL + +C++E KQ NETRA+ SL +G +P W+RY V
Sbjct: 4348 RFFEREVNLGSQLLKDIRRDLNEISAVCRAEKKQNNETRALAASLQKGEVPTGWKRYTVP 4407
Query: 183 RGCTVQQWIGDFAQRVTQLAEVADQSLLR 269
R TV W+ D +R+ QL + L+
Sbjct: 4408 REVTVMDWMTDLNERLKQLIRIGGADNLK 4436
Score = 65.3 bits (152), Expect = 4e-11
Identities = 36/78 (46%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Frame = +2
Query: 263 AKRLQNVPVWLGGLLNPEAYITATRQCVAQANSWSLEELHLQVTIPDPGAPTENAQTEWS 442
A L+ WLGG +PEAYITATRQ VAQAN+WSLE+L+L + I T++
Sbjct: 4432 ADNLKRETFWLGGTFSPEAYITATRQQVAQANTWSLEQLNLHIHI----GRTDSTDV--- 4484
Query: 443 FSVTGLKLQGA-TVKGNR 493
F ++G+ ++GA +V GN+
Sbjct: 4485 FRISGIDIRGAKSVGGNK 4502
>Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical
protein C29F3.1 protein.
Length = 755
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +2
Query: 122 DGGVPGARHAARLVAPLRRGPRLHGAAVDRRLCTEGHTAGRGGRSVA 262
+ G+ A H AR + GPR+HG +VD L +E AG GR +
Sbjct: 581 EAGLDVAEHVARYLGTAL-GPRVHGGSVD--LLSELVRAGHKGRKTS 624
>Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical protein
F18C12.1 protein.
Length = 4171
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +1
Query: 526 PLTVLTWVRGPEPASNSHTLTLPVYLNSARTELLFTVRLP 645
P+ L W + +PVY +S R++L+ +V +P
Sbjct: 4115 PIVFLAWTSESSSTITGEQIQVPVYSSSERSDLICSVNMP 4154
>Z54284-4|CAA91061.1| 1001|Caenorhabditis elegans Hypothetical protein
D2085.4 protein.
Length = 1001
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -2
Query: 337 AGSCDISFRVQQSTEPHWDILQPLSSD*SATSASCVTLCAKSPIH-CCTVQPR 182
AG+ DI++ E WD++ LS+D VT C+++P+ ++QPR
Sbjct: 903 AGTQDINYE-----EMFWDVIDKLSNDDKKALLKFVTGCSRAPVDGFKSIQPR 950
>AF025460-2|AAF02169.3| 545|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 41
protein.
Length = 545
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/67 (26%), Positives = 26/67 (38%)
Frame = -3
Query: 306 SSPPSHTGTFCNLLAATDLPPRPAV*PSVQSLRSTAAPCSRGPRRSGATRRAACRAPGTP 127
SSPP H + AA PPR +++AP PR+ + A P T
Sbjct: 70 SSPPHHQKS-----AAPSAPPRDVTSAHAPPPPASSAPIVGAPRQGATPQAAPATTPATT 124
Query: 126 PSHESRL 106
H+ +
Sbjct: 125 SQHQQSI 131
>AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical
protein Y20F4.4 protein.
Length = 1319
Score = 29.5 bits (63), Expect = 2.3
Identities = 24/71 (33%), Positives = 34/71 (47%)
Frame = -3
Query: 330 AVI*ASGFSSPPSHTGTFCNLLAATDLPPRPAV*PSVQSLRSTAAPCSRGPRRSGATRRA 151
A + AS S PP+ + T + + P P S R T + SRG RS ATRR+
Sbjct: 392 APVGASSQSKPPAPSPTSRETDSIPEAPAEPIRNISPPQPRWTRSQ-SRG--RSEATRRS 448
Query: 150 ACRAPGTPPSH 118
+ P PP++
Sbjct: 449 PPKGPSAPPAY 459
>U41556-9|AAK39192.1| 692|Caenorhabditis elegans Potassium channel,
kvqlt familyprotein 1, isoform a protein.
Length = 692
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/61 (26%), Positives = 26/61 (42%)
Frame = -3
Query: 639 PHREQQLRAGAVQVHGESQRVRIGRGLRTANPSEHSKRQVYHDRFVSNNRFPLTVAPCSF 460
P EQQ + + ES++ + + PSEH + HD N + L P ++
Sbjct: 14 PSDEQQEAGSSSAIGQESRKTVVFQEPDIGFPSEHDQLTTLHDSEEGNRKMSLVGKPLTY 73
Query: 459 K 457
K
Sbjct: 74 K 74
>U41556-8|AAM51518.1| 740|Caenorhabditis elegans Potassium channel,
kvqlt familyprotein 1, isoform b protein.
Length = 740
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/61 (26%), Positives = 26/61 (42%)
Frame = -3
Query: 639 PHREQQLRAGAVQVHGESQRVRIGRGLRTANPSEHSKRQVYHDRFVSNNRFPLTVAPCSF 460
P EQQ + + ES++ + + PSEH + HD N + L P ++
Sbjct: 62 PSDEQQEAGSSSAIGQESRKTVVFQEPDIGFPSEHDQLTTLHDSEEGNRKMSLVGKPLTY 121
Query: 459 K 457
K
Sbjct: 122 K 122
>AY572974-1|AAT77227.1| 692|Caenorhabditis elegans KQT-1 potassium
channel protein.
Length = 692
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/61 (26%), Positives = 26/61 (42%)
Frame = -3
Query: 639 PHREQQLRAGAVQVHGESQRVRIGRGLRTANPSEHSKRQVYHDRFVSNNRFPLTVAPCSF 460
P EQQ + + ES++ + + PSEH + HD N + L P ++
Sbjct: 14 PSDEQQEAGSSSAIGQESRKTVVFQEPDIGFPSEHDQLTTLHDSEEGNRKMSLVGKPLTY 73
Query: 459 K 457
K
Sbjct: 74 K 74
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 471 PCSFKPVTENDHSV*AFSVGAPGSGIVTCKCNSS 370
P FKPVT ++ + +VG +G+ TCK +S+
Sbjct: 1932 PDDFKPVTISEQFIRHPNVGLGNAGVYTCKGSSA 1965
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 471 PCSFKPVTENDHSV*AFSVGAPGSGIVTCKCNSS 370
P FKPVT ++ + +VG +G+ TCK +S+
Sbjct: 2025 PDDFKPVTISEQFIRHPNVGLGNAGVYTCKGSSA 2058
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 471 PCSFKPVTENDHSV*AFSVGAPGSGIVTCKCNSS 370
P FKPVT ++ + +VG +G+ TCK +S+
Sbjct: 1838 PDDFKPVTISEQFIRHPNVGLGNAGVYTCKGSSA 1871
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 471 PCSFKPVTENDHSV*AFSVGAPGSGIVTCKCNSS 370
P FKPVT ++ + +VG +G+ TCK +S+
Sbjct: 2025 PDDFKPVTISEQFIRHPNVGLGNAGVYTCKGSSA 2058
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 471 PCSFKPVTENDHSV*AFSVGAPGSGIVTCKCNSS 370
P FKPVT ++ + +VG +G+ TCK +S+
Sbjct: 1932 PDDFKPVTISEQFIRHPNVGLGNAGVYTCKGSSA 1965
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 471 PCSFKPVTENDHSV*AFSVGAPGSGIVTCKCNSS 370
P FKPVT ++ + +VG +G+ TCK +S+
Sbjct: 2025 PDDFKPVTISEQFIRHPNVGLGNAGVYTCKGSSA 2058
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 471 PCSFKPVTENDHSV*AFSVGAPGSGIVTCKCNSS 370
P FKPVT ++ + +VG +G+ TCK +S+
Sbjct: 1838 PDDFKPVTISEQFIRHPNVGLGNAGVYTCKGSSA 1871
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 471 PCSFKPVTENDHSV*AFSVGAPGSGIVTCKCNSS 370
P FKPVT ++ + +VG +G+ TCK +S+
Sbjct: 2025 PDDFKPVTISEQFIRHPNVGLGNAGVYTCKGSSA 2058
>U61952-7|AAB03164.1| 1042|Caenorhabditis elegans Abnormal cell
lineage protein 49 protein.
Length = 1042
Score = 28.7 bits (61), Expect = 4.0
Identities = 19/66 (28%), Positives = 25/66 (37%)
Frame = -3
Query: 645 GQPHREQQLRAGAVQVHGESQRVRIGRGLRTANPSEHSKRQVYHDRFVSNNRFPLTVAPC 466
G P Q LR G ++ + L T NPS + RQ F N P T
Sbjct: 757 GSPSTSQNLRRRVQGFSGNESSPKVHKKLSTDNPSNSNLRQTTLTNFFGTN--PKTQQQV 814
Query: 465 SFKPVT 448
+F +T
Sbjct: 815 TFADMT 820
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 471 PCSFKPVTENDHSV*AFSVGAPGSGIVTCKCNSS 370
P FKPVT ++ + +VG +G+ TCK +S+
Sbjct: 2024 PDDFKPVTISEQFIRHPNVGLGNAGVYTCKGSSA 2057
>AF163018-1|AAD49323.1| 1042|Caenorhabditis elegans bromodomain
protein LIN-49 protein.
Length = 1042
Score = 28.7 bits (61), Expect = 4.0
Identities = 19/66 (28%), Positives = 25/66 (37%)
Frame = -3
Query: 645 GQPHREQQLRAGAVQVHGESQRVRIGRGLRTANPSEHSKRQVYHDRFVSNNRFPLTVAPC 466
G P Q LR G ++ + L T NPS + RQ F N P T
Sbjct: 757 GSPSTSQNLRRRVQGFSGNESSPKVHKKLSTDNPSNSNLRQTTLTNFFGTN--PKTQQQV 814
Query: 465 SFKPVT 448
+F +T
Sbjct: 815 TFADMT 820
>Z69661-2|CAA93494.1| 925|Caenorhabditis elegans Hypothetical
protein F48F7.4 protein.
Length = 925
Score = 28.3 bits (60), Expect = 5.3
Identities = 20/74 (27%), Positives = 31/74 (41%)
Frame = -3
Query: 657 SGRDGQPHREQQLRAGAVQVHGESQRVRIGRGLRTANPSEHSKRQVYHDRFVSNNRFPLT 478
SG QP ++QQ R +G + R + R N S++ YH+ +N R P
Sbjct: 590 SGAHEQPQQQQQQR---YVNYGNATGERERQPRRDNNYSKNRYENNYHNNSSNNQRSPYQ 646
Query: 477 VAPCSFKPVTENDH 436
+P +N H
Sbjct: 647 AQNQQNQPTQQNQH 660
>Z49909-16|CAB60995.1| 418|Caenorhabditis elegans Hypothetical
protein C14A4.14 protein.
Length = 418
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = -3
Query: 561 LRTANPSEHSK--RQVYHDRFVSNNRFPLTVAPCSFKPVTENDH 436
LRTANP EH + R Y S N PL P + +NDH
Sbjct: 155 LRTANPEEHDRMNRTYYQKPNRSVNPPPLFSDPNLQNALDKNDH 198
>AC025726-25|AAK73927.2| 409|Caenorhabditis elegans Hypothetical
protein Y71G12B.26 protein.
Length = 409
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -2
Query: 397 YCHLQM*FF*RPGVSLSNALAG 332
YC LQM FF P + +S AL G
Sbjct: 154 YCALQMIFFVTPSLEISQALCG 175
>U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical
protein D1044.2c protein.
Length = 1090
Score = 27.5 bits (58), Expect = 9.3
Identities = 18/56 (32%), Positives = 22/56 (39%)
Frame = +1
Query: 127 WGPWCAACCPPRGAATPWPAAARCSSGSETLHRGSHSWPRWQISRC*EVAECPSVA 294
WGP CA CC T P + C G T G R + +C +C S A
Sbjct: 325 WGPDCAYCC-HCSEGTCHPISGDCQRGCATCWDGVACQTRQE--KCATKTQCASNA 377
>U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical
protein D1044.2a protein.
Length = 1051
Score = 27.5 bits (58), Expect = 9.3
Identities = 18/56 (32%), Positives = 22/56 (39%)
Frame = +1
Query: 127 WGPWCAACCPPRGAATPWPAAARCSSGSETLHRGSHSWPRWQISRC*EVAECPSVA 294
WGP CA CC T P + C G T G R + +C +C S A
Sbjct: 325 WGPDCAYCC-HCSEGTCHPISGDCQRGCATCWDGVACQTRQE--KCATKTQCASNA 377
>AF016445-11|AAC69054.1| 248|Caenorhabditis elegans Pharyngeal
gland toxin-relatedprotein 4 protein.
Length = 248
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 668 CGSCPGATGSRTVNSSS 618
CG CP TGS TV ++S
Sbjct: 187 CGRCPSTTGSGTVTTAS 203
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,647,021
Number of Sequences: 27780
Number of extensions: 339177
Number of successful extensions: 967
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -