Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30973
         (456 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U13071-4|AAA20671.1|  510|Caenorhabditis elegans Hypothetical pr...    30   0.69 
AC006634-3|AAF39795.3|  535|Caenorhabditis elegans Hypothetical ...    29   1.2  
AF003131-6|AAB54131.2|  166|Caenorhabditis elegans Hypothetical ...    29   1.6  
Z71262-10|CAA95816.4|  436|Caenorhabditis elegans Hypothetical p...    28   2.8  
AY037801-1|AAK94766.1|  436|Caenorhabditis elegans GLY-19 protein.     28   2.8  
U53148-1|AAB37071.1|  175|Caenorhabditis elegans Hypothetical pr...    27   4.9  
U23174-2|AAM97992.1|  100|Caenorhabditis elegans Inhibitor of se...    27   4.9  
AL110500-9|CAE54920.1|  586|Caenorhabditis elegans Hypothetical ...    27   4.9  
AL110500-8|CAB60430.1|  551|Caenorhabditis elegans Hypothetical ...    27   4.9  
Z83216-6|CAB62783.1|  534|Caenorhabditis elegans Hypothetical pr...    27   6.5  
Z81461-1|CAB03833.1|  944|Caenorhabditis elegans Hypothetical pr...    27   6.5  
L25598-6|AAA27939.2|  886|Caenorhabditis elegans Hypothetical pr...    27   6.5  
Z82083-3|CAB04971.1|  756|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z29560-8|CAA82660.1|  225|Caenorhabditis elegans Hypothetical pr...    27   8.6  
AC024791-18|AAT81180.1|  438|Caenorhabditis elegans Hypothetical...    27   8.6  
AC024791-16|AAF60674.3|  468|Caenorhabditis elegans Hypothetical...    27   8.6  

>U13071-4|AAA20671.1|  510|Caenorhabditis elegans Hypothetical
           protein T22F7.1 protein.
          Length = 510

 Score = 30.3 bits (65), Expect = 0.69
 Identities = 26/83 (31%), Positives = 39/83 (46%)
 Frame = +1

Query: 19  KISASTCIIITGIWSTRLRPTIFQS*LRTDVGSCSSICTSK**PASTASVCATH*KELKN 198
           K  AS C I   I++  L PT  +S     +G CS+ C       +  ++ A H   L +
Sbjct: 432 KFCASCCYIFCFIYAAELFPTWCRS---CCIGVCSTCC-------NIGAIVAPH-IFLID 480

Query: 199 SATGGSQFRRLTSLSLTVCFVTW 267
           SA  G+QF  L ++ L    +TW
Sbjct: 481 SAAPGAQFLVLAAVGLLCSGLTW 503


>AC006634-3|AAF39795.3|  535|Caenorhabditis elegans Hypothetical
           protein F35F11.1 protein.
          Length = 535

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -1

Query: 408 GWQSNGTSRDSFFHVSSPAFHF-VNGHK*TSAARFRSCHCIP 286
           GW+ NG   D F H+  PAFHF V+  K  +     + H IP
Sbjct: 459 GWKWNGNPTDIFTHI--PAFHFHVDQDKPVAQVMQWNVHKIP 498


>AF003131-6|AAB54131.2|  166|Caenorhabditis elegans Hypothetical
           protein C09D1.2 protein.
          Length = 166

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 10/54 (18%), Positives = 27/54 (50%)
 Frame = +3

Query: 12  WREDIGINLHHYHWHLVYPFTANDLSIVAKDRRGELFFYMHQQVIARFNCERLC 173
           W    G   ++ +W    PF    L+++  ++RG+   +   ++++++N   +C
Sbjct: 109 WHWMDGSEFNYMNWDRGMPFGRRALAVLVMNKRGKWINHYADKILSQYNAVAVC 162


>Z71262-10|CAA95816.4|  436|Caenorhabditis elegans Hypothetical
           protein F22D6.12 protein.
          Length = 436

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
 Frame = +3

Query: 78  NDLSIVAKDRRGELFFYMHQQVIAR--FNCERLCNSLKRVKKFSNWREPIPEAYFPKLDS 251
           N  +I+   +  E    MH  +I    F+C   C +LK + +F+       E +FP    
Sbjct: 60  NCSNILKGYKTNEKLDIMHLDIIEEQLFSCTNKCQTLKTLFRFNTNPMSAEEKHFPLSYG 119

Query: 252 LLRHVDGPHV 281
           +L + D P V
Sbjct: 120 MLVYKDLPQV 129


>AY037801-1|AAK94766.1|  436|Caenorhabditis elegans GLY-19 protein.
          Length = 436

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
 Frame = +3

Query: 78  NDLSIVAKDRRGELFFYMHQQVIAR--FNCERLCNSLKRVKKFSNWREPIPEAYFPKLDS 251
           N  +I+   +  E    MH  +I    F+C   C +LK + +F+       E +FP    
Sbjct: 60  NCSNILKGYKTNEKLDIMHLDIIEEQLFSCTNKCQTLKTLFRFNTNPMSAEEKHFPLSYG 119

Query: 252 LLRHVDGPHV 281
           +L + D P V
Sbjct: 120 MLVYKDLPQV 129


>U53148-1|AAB37071.1|  175|Caenorhabditis elegans Hypothetical
           protein C26F1.7 protein.
          Length = 175

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 10/34 (29%), Positives = 23/34 (67%), Gaps = 3/34 (8%)
 Frame = +3

Query: 30  INLHHYHWHLVYPFTANDLSIVAKD---RRGELF 122
           +++HH H H++YP   +D+ ++++    R G++F
Sbjct: 105 LSVHHLHMHIIYPI--SDMGLISRKLTFRPGKVF 136


>U23174-2|AAM97992.1|  100|Caenorhabditis elegans Inhibitor of
           serine protease likeprotein protein 1 protein.
          Length = 100

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -1

Query: 453 PTCCRAYRCQEPSLPGWQSNGTSRDSFFHVSSP 355
           P  C+  RCQ P+  G++ +G     F H S P
Sbjct: 66  PRICQPARCQCPAHKGYRRDGQGNCIFCHDSVP 98


>AL110500-9|CAE54920.1|  586|Caenorhabditis elegans Hypothetical
           protein Y87G2A.8b protein.
          Length = 586

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -2

Query: 338 MVTNRLRRHDSGPAIAYRTDVGAIHVTKQTVKL 240
           MVT  L+ +  GP + + ++V   HV + T KL
Sbjct: 200 MVTESLKNYQIGPNVHFVSNVDGTHVAEVTKKL 232


>AL110500-8|CAB60430.1|  551|Caenorhabditis elegans Hypothetical
           protein Y87G2A.8a protein.
          Length = 551

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -2

Query: 338 MVTNRLRRHDSGPAIAYRTDVGAIHVTKQTVKL 240
           MVT  L+ +  GP + + ++V   HV + T KL
Sbjct: 165 MVTESLKNYQIGPNVHFVSNVDGTHVAEVTKKL 197


>Z83216-6|CAB62783.1|  534|Caenorhabditis elegans Hypothetical
           protein C08F11.8 protein.
          Length = 534

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -2

Query: 329 NRLRRHDSGPAIAYRTDVGAIHVTKQTVK 243
           N L+RH  G A+ ++TD+G     + T+K
Sbjct: 409 NMLKRH-GGAAVLHKTDLGNAETIRNTIK 436


>Z81461-1|CAB03833.1|  944|Caenorhabditis elegans Hypothetical
           protein C04F12.1 protein.
          Length = 944

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
 Frame = -1

Query: 429 CQEPSLPGWQSNGTS-RDSF---FHVSSPAFHFVNGHK*TSAARFRSCHCI 289
           C EPS  G+  NGT+  ++F   FH   P    V+ H     ARF   H I
Sbjct: 688 CDEPSCVGFGFNGTACPEAFIGDFHYQLPRHEQVDEHLLKLRARFMLNHYI 738


>L25598-6|AAA27939.2|  886|Caenorhabditis elegans Hypothetical
           protein C06G4.1 protein.
          Length = 886

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
 Frame = +3

Query: 159 CERLCNSL--KRVKKFS----NWREPIPEAYFPKLDSLLRHVDGPH 278
           C+ +C  +  K+V K      ++R+ IPE+YFP + + L +V   H
Sbjct: 43  CQDICKPIYNKKVHKDPIVRVSYRQRIPESYFPGISTSLINVQREH 88


>Z82083-3|CAB04971.1|  756|Caenorhabditis elegans Hypothetical
           protein ZK1010.5 protein.
          Length = 756

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 123 FYMHQQVIARFNCERLCNSLKRVKKFSNW 209
           F++HQ V  R   ER  +S+ RVK++  W
Sbjct: 14  FFLHQAVGQREVYERYPDSVGRVKRYELW 42


>Z29560-8|CAA82660.1|  225|Caenorhabditis elegans Hypothetical
           protein K03H1.8 protein.
          Length = 225

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
 Frame = +1

Query: 304 PESCRRSLFVTIDEMERWRR-----NVEEAIATGTVRLPTGQTRLLTSI 435
           P+ C  SLF T+  ++ W++     NV   +AT    +   +  LL S+
Sbjct: 154 PDGCSNSLFTTVYHLQNWKQKKGLDNVGGLVATIEKVMKVNENMLLMSM 202


>AC024791-18|AAT81180.1|  438|Caenorhabditis elegans Hypothetical
           protein Y47G6A.19b protein.
          Length = 438

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -2

Query: 317 RHDSGPAIAYRTDVGAIHVTKQTVKLREVSLRNWLPPVAEFFNSF 183
           RH +GP I Y    G+    K+T+K++  S    L P  E +N F
Sbjct: 337 RHGTGPEIIYAFSGGSTDWAKETLKIK-YSYTIELRPGYEEWNGF 380


>AC024791-16|AAF60674.3|  468|Caenorhabditis elegans Hypothetical
           protein Y47G6A.19a protein.
          Length = 468

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -2

Query: 317 RHDSGPAIAYRTDVGAIHVTKQTVKLREVSLRNWLPPVAEFFNSF 183
           RH +GP I Y    G+    K+T+K++  S    L P  E +N F
Sbjct: 337 RHGTGPEIIYAFSGGSTDWAKETLKIK-YSYTIELRPGYEEWNGF 380


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,222,243
Number of Sequences: 27780
Number of extensions: 234943
Number of successful extensions: 617
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)