Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30973
         (456 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...   159   1e-41
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      58   3e-11
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          57   8e-11
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          55   3e-10
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      55   3e-10
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          54   6e-10
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      54   6e-10
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    36   3e-04
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    21   8.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   8.4  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score =  159 bits (386), Expect = 1e-41
 Identities = 67/85 (78%), Positives = 76/85 (89%)
 Frame = +3

Query: 3   LAYWREDIGINLHHYHWHLVYPFTANDLSIVAKDRRGELFFYMHQQVIARFNCERLCNSL 182
           +AYWREDIGINLHH+HWHLVYPF   D+ IV KDRRGELF+YMHQQ++AR+NCERLCN L
Sbjct: 196 VAYWREDIGINLHHWHWHLVYPFEG-DIRIVNKDRRGELFYYMHQQIMARYNCERLCNRL 254

Query: 183 KRVKKFSNWREPIPEAYFPKLDSLL 257
            RVK+F NW EPIPEAYFPKLDSL+
Sbjct: 255 GRVKRFINWHEPIPEAYFPKLDSLV 279



 Score = 29.5 bits (63), Expect = 0.018
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +1

Query: 337 IDEMERWRRNVEEAIATGTVRLPTGQTRLLT 429
           I ++ERWR  + EAI TG+V    G+   LT
Sbjct: 307 IQDLERWRDRIYEAIHTGSVINTRGERIQLT 337



 Score = 25.0 bits (52), Expect = 0.39
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 257 SSRGWPPRQSGMQWQDLNRAAE 322
           +SR WP R SG   +D+NR  +
Sbjct: 280 ASRTWPFRPSGTVLKDINRQVD 301


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 58.4 bits (135), Expect = 3e-11
 Identities = 26/81 (32%), Positives = 45/81 (55%)
 Frame = +3

Query: 3   LAYWREDIGINLHHYHWHLVYPFTANDLSIVAKDRRGELFFYMHQQVIARFNCERLCNSL 182
           L Y+ EDIG+N +++     +PF          D RGE + Y H+ ++ R+  ERL N L
Sbjct: 220 LIYFIEDIGLNTYYFFLRQAFPFWLPSKEYDLPDYRGEEYLYSHKLLLNRYYLERLSNDL 279

Query: 183 KRVKKFSNWREPIPEAYFPKL 245
             +++F +W++P    Y+P +
Sbjct: 280 PHLEEF-DWQKPFYPGYYPTM 299


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 57.2 bits (132), Expect = 8e-11
 Identities = 26/81 (32%), Positives = 45/81 (55%)
 Frame = +3

Query: 3   LAYWREDIGINLHHYHWHLVYPFTANDLSIVAKDRRGELFFYMHQQVIARFNCERLCNSL 182
           L Y+ EDIG+N +++     +PF          D RGE + Y H+ ++ R+  ERL N L
Sbjct: 220 LNYFIEDIGLNTYYFFLRQAFPFWLPSKEYDLPDYRGEEYLYSHKLLLNRYYLERLSNDL 279

Query: 183 KRVKKFSNWREPIPEAYFPKL 245
             +++F +W++P    Y+P +
Sbjct: 280 PYLEEF-DWQKPFYPGYYPTM 299


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 55.2 bits (127), Expect = 3e-10
 Identities = 22/79 (27%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
 Frame = +3

Query: 3   LAYWREDIGINLHHYHWHLVYPFTANDLSI-VAKDRRGELFFYMHQQVIARFNCERLCNS 179
           L Y+ ED+ +N ++Y+   + P+  +     + K+ RG+L++++H+Q++ R+  ER+ N 
Sbjct: 221 LDYFMEDVELNAYYYYMREMLPYWMSSSQYHMPKEIRGQLYYFLHKQLMTRYFLERMSND 280

Query: 180 LKRVKKFSNWREPIPEAYF 236
           L +  +F +W +PI   ++
Sbjct: 281 LGKTAEF-DWNKPINSGFY 298


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 55.2 bits (127), Expect = 3e-10
 Identities = 22/79 (27%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
 Frame = +3

Query: 3   LAYWREDIGINLHHYHWHLVYPFTANDLSI-VAKDRRGELFFYMHQQVIARFNCERLCNS 179
           L Y+ ED+ +N ++Y+   + P+  +     + K+ RG+L++++H+Q++ R+  ER+ N 
Sbjct: 221 LDYFMEDVELNAYYYYMREMLPYWMSSSQYHMPKEIRGQLYYFLHKQLMTRYFLERMSND 280

Query: 180 LKRVKKFSNWREPIPEAYF 236
           L +  +F +W +PI   ++
Sbjct: 281 LGKTAEF-DWNKPINSGFY 298


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 54.4 bits (125), Expect = 6e-10
 Identities = 27/81 (33%), Positives = 45/81 (55%)
 Frame = +3

Query: 3   LAYWREDIGINLHHYHWHLVYPFTANDLSIVAKDRRGELFFYMHQQVIARFNCERLCNSL 182
           L Y+ ED+G+N  ++  +  YP      S+     RGE +F++H+QV+ R+  ERL N +
Sbjct: 219 LNYFTEDVGLNHFYFMLNHNYPPFMLSNSLNFPQIRGEFYFFLHKQVLNRYYLERLSNDM 278

Query: 183 KRVKKFSNWREPIPEAYFPKL 245
             V  + +   PIP  Y+P +
Sbjct: 279 GEV-SYVSLDHPIPTGYYPTM 298


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 54.4 bits (125), Expect = 6e-10
 Identities = 27/81 (33%), Positives = 45/81 (55%)
 Frame = +3

Query: 3   LAYWREDIGINLHHYHWHLVYPFTANDLSIVAKDRRGELFFYMHQQVIARFNCERLCNSL 182
           L Y+ ED+G+N  ++  +  YP      S+     RGE +F++H+QV+ R+  ERL N +
Sbjct: 219 LNYFTEDVGLNHFYFMLNHNYPPFMLSNSLNFPQIRGEFYFFLHKQVLNRYYLERLSNDM 278

Query: 183 KRVKKFSNWREPIPEAYFPKL 245
             V  + +   PIP  Y+P +
Sbjct: 279 GEV-SYVSLDHPIPTGYYPTM 298


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 35.5 bits (78), Expect = 3e-04
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = +3

Query: 108 RGELFFYMHQQVIARFNCERLCNSLKRVKKFSNWREPIPEAYFPKLDSL 254
           RG  + Y+HQQ++AR+   RL N L  +K      E +   Y P L  L
Sbjct: 272 RGAQYLYLHQQLLARYELNRLSNGLGPIKDID--YENVQSLYQPHLRGL 318


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -2

Query: 410 PVGNLTVPVAIASSTFLLQRSISSMVTNRLRRHDS 306
           PVG L V       + L  + I+ ++   L+ HD+
Sbjct: 294 PVGTLIVGALAGLLSVLGYKYITPLIQKHLKIHDT 328


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 364 NVEEAIATGTVRLPTGQTR 420
           N   A+ TGT  +PT + R
Sbjct: 249 NATAAMTTGTTTIPTRRLR 267


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,494
Number of Sequences: 438
Number of extensions: 2710
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12066642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)