Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30963
         (739 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0594 - 18831011-18831360,18831562-18832111,18832364-188334...    28   8.9  

>09_04_0594 - 18831011-18831360,18831562-18832111,18832364-18833406,
            18833496-18833760,18835194-18835340,18835431-18835511,
            18835626-18835804,18835935-18836093,18836269-18836398,
            18836935-18837094,18837337-18837419,18837865-18837915,
            18838035-18838151,18838273-18838359
          Length = 1133

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -1

Query: 703  LLNLLWTFTNNSRPKLAKSVQPFSS 629
            L+ ++WTF+N S  KL+K +  F S
Sbjct: 1108 LVAIMWTFSNGSAVKLSKGLWKFPS 1132


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,345,408
Number of Sequences: 37544
Number of extensions: 206182
Number of successful extensions: 297
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 297
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)