Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30962
         (755 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   7.1  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   9.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   9.4  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   9.4  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = -2

Query: 577 CSPRGSSCVWPT*LSKALSGPT 512
           C   G SC WP    K L G T
Sbjct: 135 CLSTGGSCYWPR--GKNLGGTT 154


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -3

Query: 396 IFPESNCFWKSSFTLLCGWK*NKAISFL 313
           IF  S+  W S+ TL   W+    I  L
Sbjct: 488 IFMSSSLQWSSTHTLDVAWRRKVTIEIL 515


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -3

Query: 396 IFPESNCFWKSSFTLLCGWK*NKAISFL 313
           IF  S+  W S+ TL   W+    I  L
Sbjct: 526 IFMSSSLQWSSTHTLDVAWRRKVTIEIL 553


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = -1

Query: 371 GSHRLRFCADGNKTRQYPSCVCVCPSG 291
           GSH    C   +K+  Y    C C  G
Sbjct: 275 GSHSCEACPAHSKSSDYGFTECRCDPG 301


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,893
Number of Sequences: 438
Number of extensions: 3664
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)