Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30960
(707 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 33 0.15
Z81460-5|CAB03832.1| 952|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z70209-3|CAA94147.1| 952|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z81460-2|CAB03831.1| 439|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 29 3.3
AC024776-3|AAK68466.1| 453|Caenorhabditis elegans Hypothetical ... 29 4.3
Z81120-3|CAB03345.2| 135|Caenorhabditis elegans Hypothetical pr... 28 5.7
U40798-7|AAA81477.1| 342|Caenorhabditis elegans Hypothetical pr... 28 5.7
AY204202-1|AAO39203.1| 339|Caenorhabditis elegans nuclear recep... 28 5.7
AY204201-1|AAO39202.1| 409|Caenorhabditis elegans nuclear recep... 28 5.7
AY204200-1|AAO39201.1| 304|Caenorhabditis elegans nuclear recep... 28 5.7
AF408754-1|AAO27833.1| 418|Caenorhabditis elegans nuclear recep... 28 5.7
AC084155-11|AAQ91893.1| 304|Caenorhabditis elegans Nuclear horm... 28 5.7
AC084155-10|AAG23368.3| 418|Caenorhabditis elegans Nuclear horm... 28 5.7
AF023454-1|AAB82794.1| 707|Caenorhabditis elegans protein phosp... 28 7.5
AF003389-11|AAC71139.2| 707|Caenorhabditis elegans Phosphatase ... 28 7.5
Z81137-2|CAB03465.1| 386|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z69634-4|CAA93455.2| 674|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 27 9.9
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 27 9.9
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 27 9.9
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 9.9
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 9.9
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 27 9.9
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 33.5 bits (73), Expect = 0.15
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = +3
Query: 375 EIFKAKVPASQEPREAVP**LDASQPSCRSAETETRTQARNTKPGPLRRTNQPLNVKDLE 554
++ K K PA + + P + S S +++ E+R + P P + +D E
Sbjct: 94 DLKKEKAPAEKPSKPTAPPGVQKSSSSPSASKAESRPLRKRISPPPSENREKEKQSRDKE 153
Query: 555 TRTSQS--DKSQGATTPKTISTAS 620
R S+S D+ ATT ++ T+S
Sbjct: 154 RRRSRSPRDRRGRATTSRSGRTSS 177
>Z81460-5|CAB03832.1| 952|Caenorhabditis elegans Hypothetical
protein C04A11.4 protein.
Length = 952
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2
Query: 92 ICQLDEYCSPETNRC 136
IC LDEYC+ ETN C
Sbjct: 444 ICDLDEYCNGETNDC 458
>Z70209-3|CAA94147.1| 952|Caenorhabditis elegans Hypothetical
protein C04A11.4 protein.
Length = 952
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2
Query: 92 ICQLDEYCSPETNRC 136
IC LDEYC+ ETN C
Sbjct: 444 ICDLDEYCNGETNDC 458
>Z81460-2|CAB03831.1| 439|Caenorhabditis elegans Hypothetical
protein C04A11.2 protein.
Length = 439
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3
Query: 459 RSAETETRTQARNTKPGPLRRTNQPLNVKDLETRTSQSDKSQGA-TTPKTIS 611
RSA T TR + N P N NV+ + RTS S+ S A TP T S
Sbjct: 168 RSARTSTRAASGNRTP--TGTPNMTRNVRPVTNRTSSSNVSPAAQVTPGTSS 217
>Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 68 DGIRCGQLICQLDEYCSPETNRCAPCNVVCNKTHHNYDSGLCVKEC 205
D C ++ C+ +E+ TN C P VVC+ +D G K+C
Sbjct: 320 DEEHCSEVQCKSNEFRCESTNVCVPTVVVCDGWKDCHD-GSDEKKC 364
>Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 68 DGIRCGQLICQLDEYCSPETNRCAPCNVVCNKTHHNYDSGLCVKEC 205
D C ++ C+ +E+ TN C P VVC+ +D G K+C
Sbjct: 320 DEEHCSEVQCKSNEFRCESTNVCVPTVVVCDGWKDCHD-GSDEKKC 364
>AC024776-3|AAK68466.1| 453|Caenorhabditis elegans Hypothetical
protein Y41D4B.16 protein.
Length = 453
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +2
Query: 419 SSTLMT*RITTLMPKRRNRNPNSSSKYETRSPKTNEPTSQREGLRDQNLT 568
SST T I + P +++ T SP TN PT+ R Q+ T
Sbjct: 373 SSTASTPSIASTATSAATNPPTTTAGASTNSPATNPPTTSRPITASQSTT 422
>Z81120-3|CAB03345.2| 135|Caenorhabditis elegans Hypothetical
protein T12D8.5 protein.
Length = 135
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +1
Query: 355 CRGRVSWRYLKQKFQPAKNRVKQYPNDLTHHNPHAEAPKPKPELKLE 495
CR + K++ + K + + L HN H +AP+ PE +E
Sbjct: 49 CRIESETQSNKERVELLKQEIDRAEQLLAEHNKHVDAPEIAPETYME 95
>U40798-7|AAA81477.1| 342|Caenorhabditis elegans Hypothetical
protein R13A1.8 protein.
Length = 342
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +3
Query: 471 TETRTQARNTKPGPLRRTNQPL---NVKDLETRTSQSDKSQGATTPKTI 608
T T +++ K G RR + P NVK+ T S + +TTP TI
Sbjct: 9 TSTSSKSTKGKLGRQRRLSDPSQNQNVKNCHMPTGSSSNNTSSTTPPTI 57
>AY204202-1|AAO39203.1| 339|Caenorhabditis elegans nuclear receptor
NHR-114 protein.
Length = 339
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 456 CRSAETETRTQARNTKP-GPLRRTNQPLNVKDLETRTSQSDKSQGATTPKTIS 611
C S + +N P G +RT +P K+L+T TS +GA+TP ++S
Sbjct: 75 CLSVGMDRNALQQNRDPIGYTKRTRRPK--KELKT-TSDCSSDEGASTPPSVS 124
>AY204201-1|AAO39202.1| 409|Caenorhabditis elegans nuclear receptor
NHR-114 protein.
Length = 409
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 456 CRSAETETRTQARNTKP-GPLRRTNQPLNVKDLETRTSQSDKSQGATTPKTIS 611
C S + +N P G +RT +P K+L+T TS +GA+TP ++S
Sbjct: 66 CLSVGMDRNALQQNRDPIGYTKRTRRPK--KELKT-TSDCSSDEGASTPPSVS 115
>AY204200-1|AAO39201.1| 304|Caenorhabditis elegans nuclear receptor
NHR-114 protein.
Length = 304
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 456 CRSAETETRTQARNTKP-GPLRRTNQPLNVKDLETRTSQSDKSQGATTPKTIS 611
C S + +N P G +RT +P K+L+T TS +GA+TP ++S
Sbjct: 75 CLSVGMDRNALQQNRDPIGYTKRTRRPK--KELKT-TSDCSSDEGASTPPSVS 124
>AF408754-1|AAO27833.1| 418|Caenorhabditis elegans nuclear receptor
protein protein.
Length = 418
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 456 CRSAETETRTQARNTKP-GPLRRTNQPLNVKDLETRTSQSDKSQGATTPKTIS 611
C S + +N P G +RT +P K+L+T TS +GA+TP ++S
Sbjct: 75 CLSVGMDRNALQQNRDPIGYTKRTRRPK--KELKT-TSDCSSDEGASTPPSVS 124
>AC084155-11|AAQ91893.1| 304|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 114, isoform b protein.
Length = 304
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 456 CRSAETETRTQARNTKP-GPLRRTNQPLNVKDLETRTSQSDKSQGATTPKTIS 611
C S + +N P G +RT +P K+L+T TS +GA+TP ++S
Sbjct: 75 CLSVGMDRNALQQNRDPIGYTKRTRRPK--KELKT-TSDCSSDEGASTPPSVS 124
>AC084155-10|AAG23368.3| 418|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 114, isoform a protein.
Length = 418
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 456 CRSAETETRTQARNTKP-GPLRRTNQPLNVKDLETRTSQSDKSQGATTPKTIS 611
C S + +N P G +RT +P K+L+T TS +GA+TP ++S
Sbjct: 75 CLSVGMDRNALQQNRDPIGYTKRTRRPK--KELKT-TSDCSSDEGASTPPSVS 124
>AF023454-1|AAB82794.1| 707|Caenorhabditis elegans protein
phosphatase with EF-hands protein.
Length = 707
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 458 PKRRNRNPNSSSKYETRSPKTNEPTSQREGLRDQN 562
P +NP++ K TR+ T +SQR D N
Sbjct: 5 PSSGRQNPSTELKKSTRATTTTTSSSQRNNYNDNN 39
>AF003389-11|AAC71139.2| 707|Caenorhabditis elegans Phosphatase
with ef hands protein1, isoform a protein.
Length = 707
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 458 PKRRNRNPNSSSKYETRSPKTNEPTSQREGLRDQN 562
P +NP++ K TR+ T +SQR D N
Sbjct: 5 PSSGRQNPSTELKKSTRATTTTTSSSQRNNYNDNN 39
>Z81137-2|CAB03465.1| 386|Caenorhabditis elegans Hypothetical
protein W02D9.3 protein.
Length = 386
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +1
Query: 376 RYLKQKFQPAKNRVKQYPNDLTHHNPHAEAPKPKPELKLEIRNPVP 513
++L + +KN K+ D P+ + P PKP + + +P P
Sbjct: 207 KFLSSQSNGSKNAKKRRQADSDDDTPNVQIPFPKPSVFCPLLSPEP 252
>Z69634-4|CAA93455.2| 674|Caenorhabditis elegans Hypothetical
protein B0001.6 protein.
Length = 674
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +3
Query: 444 SQPSCRSAETETRTQARNTKPGPLRRTNQPLNVKDLETRTSQSDKSQGATTPKTISTAS 620
S P+ R + E+R + N++P P + N + E + + + T TIS S
Sbjct: 398 SAPARRISSNESRRENPNSQPAPSKMQNVFREDPEAEYKRPERSNADNDETSSTISACS 456
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 77 RCGQLICQLDEYCSPETNRCAPCNVVCNKTHHNY 178
R G++ L C +NRC+P N +C T Y
Sbjct: 1066 RPGRVCVALQNECLDGSNRCSP-NALCTDTEEGY 1098
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 77 RCGQLICQLDEYCSPETNRCAPCNVVCNKTHHNY 178
R G++ L C +NRC+P N +C T Y
Sbjct: 1650 RPGRVCVALQNECLDGSNRCSP-NALCTDTEEGY 1682
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 77 RCGQLICQLDEYCSPETNRCAPCNVVCNKTHHNY 178
R G++ L C +NRC+P N +C T Y
Sbjct: 1066 RPGRVCVALQNECLDGSNRCSP-NALCTDTEEGY 1098
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 77 RCGQLICQLDEYCSPETNRCAPCNVVCNKTHHNY 178
R G++ L C +NRC+P N +C T Y
Sbjct: 1650 RPGRVCVALQNECLDGSNRCSP-NALCTDTEEGY 1682
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +3
Query: 438 DASQPSCRSAETETRTQARNTKPGPLRRTNQPLNVKDLETRTSQSDKSQGAT 593
D+S T+ TQ + ++P P +RT + +++ +T + KS+ T
Sbjct: 9192 DSSISETSETLTKDLTQTKQSEPEPAKRTTETSVQDEVKRKTETTSKSKQTT 9243
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +3
Query: 438 DASQPSCRSAETETRTQARNTKPGPLRRTNQPLNVKDLETRTSQSDKSQGAT 593
D+S T+ TQ + ++P P +RT + +++ +T + KS+ T
Sbjct: 9212 DSSISETSETLTKDLTQTKQSEPEPAKRTTETSVQDEVKRKTETTSKSKQTT 9263
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +3
Query: 438 DASQPSCRSAETETRTQARNTKPGPLRRTNQPLNVKDLETRTSQSDKSQGAT 593
D+S T+ TQ + ++P P +RT + +++ +T + KS+ T
Sbjct: 9212 DSSISETSETLTKDLTQTKQSEPEPAKRTTETSVQDEVKRKTETTSKSKQTT 9263
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 77 RCGQLICQLDEYCSPETNRCAPCNVVCNKTHHNY 178
R G++ L C +NRC+P N +C T Y
Sbjct: 1650 RPGRVCVALQNECLDGSNRCSP-NALCTDTEEGY 1682
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,582,182
Number of Sequences: 27780
Number of extensions: 343199
Number of successful extensions: 1171
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1170
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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