Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30957
         (710 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L06498-1|AAA60286.1|  119|Homo sapiens ribosomal protein S20 pro...    36   0.11 
BC087850-1|AAH87850.1|  119|Homo sapiens ribosomal protein S20 p...    36   0.11 
BC007507-1|AAH07507.1|  119|Homo sapiens ribosomal protein S20 p...    36   0.11 
AB061842-1|BAB79480.1|  119|Homo sapiens ribosomal protein S20 p...    36   0.11 
U66146-1|AAC51165.1|  592|Homo sapiens CD6e protein.                   33   1.3  
L78838-2|AAL40085.1|  592|Homo sapiens T cell surface glycoprote...    33   1.3  
BC113995-1|AAI13996.1|  251|Homo sapiens B3GAT2 protein protein.       32   1.8  
AY070110-1|AAL58977.1|  323|Homo sapiens UDP-glucuronyltransfera...    32   1.8  
AY070019-1|AAL57718.1|  323|Homo sapiens UDP-glucuronyltransfera...    32   1.8  
AL450320-1|CAI39582.1|  323|Homo sapiens beta-1,3-glucuronyltran...    32   1.8  
AL121961-2|CAI42145.1|  323|Homo sapiens beta-1,3-glucuronyltran...    32   1.8  
AB075843-1|BAB85549.1|  488|Homo sapiens KIAA1963 protein protein.     32   1.8  
AB196633-1|BAE53435.1| 1857|Homo sapiens C8orfK23 protein protein.     31   5.4  
AJ295276-1|CAC17464.1|  605|Homo sapiens intermediate dynein cha...    30   7.1  

>L06498-1|AAA60286.1|  119|Homo sapiens ribosomal protein S20
           protein.
          Length = 119

 Score = 36.3 bits (80), Expect = 0.11
 Identities = 20/30 (66%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +3

Query: 102 KDIEKPQAEVS-PIHRIRITLTSRNVRSLE 188
           KD  K   E    IHRIRITLTSRNV+SLE
Sbjct: 4   KDTGKTPVEPEVAIHRIRITLTSRNVKSLE 33


>BC087850-1|AAH87850.1|  119|Homo sapiens ribosomal protein S20
           protein.
          Length = 119

 Score = 36.3 bits (80), Expect = 0.11
 Identities = 20/30 (66%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +3

Query: 102 KDIEKPQAEVS-PIHRIRITLTSRNVRSLE 188
           KD  K   E    IHRIRITLTSRNV+SLE
Sbjct: 4   KDTGKTPVEPEVAIHRIRITLTSRNVKSLE 33


>BC007507-1|AAH07507.1|  119|Homo sapiens ribosomal protein S20
           protein.
          Length = 119

 Score = 36.3 bits (80), Expect = 0.11
 Identities = 20/30 (66%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +3

Query: 102 KDIEKPQAEVS-PIHRIRITLTSRNVRSLE 188
           KD  K   E    IHRIRITLTSRNV+SLE
Sbjct: 4   KDTGKTPVEPEVAIHRIRITLTSRNVKSLE 33


>AB061842-1|BAB79480.1|  119|Homo sapiens ribosomal protein S20
           protein.
          Length = 119

 Score = 36.3 bits (80), Expect = 0.11
 Identities = 20/30 (66%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +3

Query: 102 KDIEKPQAEVS-PIHRIRITLTSRNVRSLE 188
           KD  K   E    IHRIRITLTSRNV+SLE
Sbjct: 4   KDTGKTPVEPEVAIHRIRITLTSRNVKSLE 33


>U66146-1|AAC51165.1|  592|Homo sapiens CD6e protein.
          Length = 592

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = +1

Query: 238 LAVVLHVVTGKTLALPNLIALQHIPLS-PAGVIAKRPAPIALPNSCAXEWRMAN 396
           +A +L  + GK  ALP ++  QH+P + PAG  + +P PI +P   +   R+ +
Sbjct: 419 IAFILLRIKGK-YALPVMVNHQHLPTTIPAGSNSYQPVPITIPKEDSQRHRVTD 471


>L78838-2|AAL40085.1|  592|Homo sapiens T cell surface glycoprotein
           CD6 isoform e protein.
          Length = 592

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = +1

Query: 238 LAVVLHVVTGKTLALPNLIALQHIPLS-PAGVIAKRPAPIALPNSCAXEWRMAN 396
           +A +L  + GK  ALP ++  QH+P + PAG  + +P PI +P   +   R+ +
Sbjct: 419 IAFILLRIKGK-YALPVMVNHQHLPTTIPAGSNSYQPVPITIPKEDSQRHRVTD 471


>BC113995-1|AAI13996.1|  251|Homo sapiens B3GAT2 protein protein.
          Length = 251

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +2

Query: 134 PYPPHQDHSYFSQCALTRGGARYPIR 211
           P PP     YFS  A+ RGGAR P+R
Sbjct: 30  PVPPLTPRPYFSPYAVGRGGARLPLR 55


>AY070110-1|AAL58977.1|  323|Homo sapiens
           UDP-glucuronyltransferase-S protein.
          Length = 323

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +2

Query: 134 PYPPHQDHSYFSQCALTRGGARYPIR 211
           P PP     YFS  A+ RGGAR P+R
Sbjct: 30  PVPPLTPRPYFSPYAVGRGGARLPLR 55


>AY070019-1|AAL57718.1|  323|Homo sapiens
           UDP-glucuronyltransferase-S protein.
          Length = 323

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +2

Query: 134 PYPPHQDHSYFSQCALTRGGARYPIR 211
           P PP     YFS  A+ RGGAR P+R
Sbjct: 30  PVPPLTPRPYFSPYAVGRGGARLPLR 55


>AL450320-1|CAI39582.1|  323|Homo sapiens
           beta-1,3-glucuronyltransferase 2
           (glucuronosyltransferase S) protein.
          Length = 323

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +2

Query: 134 PYPPHQDHSYFSQCALTRGGARYPIR 211
           P PP     YFS  A+ RGGAR P+R
Sbjct: 30  PVPPLTPRPYFSPYAVGRGGARLPLR 55


>AL121961-2|CAI42145.1|  323|Homo sapiens
           beta-1,3-glucuronyltransferase 2
           (glucuronosyltransferase S) protein.
          Length = 323

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +2

Query: 134 PYPPHQDHSYFSQCALTRGGARYPIR 211
           P PP     YFS  A+ RGGAR P+R
Sbjct: 30  PVPPLTPRPYFSPYAVGRGGARLPLR 55


>AB075843-1|BAB85549.1|  488|Homo sapiens KIAA1963 protein protein.
          Length = 488

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +2

Query: 134 PYPPHQDHSYFSQCALTRGGARYPIR 211
           P PP     YFS  A+ RGGAR P+R
Sbjct: 195 PVPPLTPRPYFSPYAVGRGGARLPLR 220


>AB196633-1|BAE53435.1| 1857|Homo sapiens C8orfK23 protein protein.
          Length = 1857

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +1

Query: 259  VTGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPN--SCAXEWRMANCKR*YFV 417
            +TGK  A  +L+  +    +P G   K P P+A PN    +  W M+  K  Y++
Sbjct: 1762 LTGKVEAEFHLVTAEEAEKNPVGKARKEPEPLAKPNRPDTSFSWFMSPFKCLYYL 1816


>AJ295276-1|CAC17464.1|  605|Homo sapiens intermediate dynein chain
           protein.
          Length = 605

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 13/52 (25%), Positives = 23/52 (44%)
 Frame = +3

Query: 468 PKSAKSLINQKNRPDRVECCSSLEQESTIKERGLQRQRAKNRLSGRWPTYVN 623
           P+ A+  + +      ++C  S+ +     ER   + R  N + G WP  VN
Sbjct: 35  PELAEQFVERNPVDTGIQCSISMSEHEANSERFEMKTRGVNHVEGGWPKDVN 86


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,565,841
Number of Sequences: 237096
Number of extensions: 2706722
Number of successful extensions: 5468
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5468
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)