Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30955
         (349 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0206 - 2206359-2209142                                           27   3.1  
09_02_0139 - 4875234-4876210,4877532-4877932,4878056-4878135           27   4.0  
03_06_0507 + 34404843-34404968,34405091-34405151,34405260-344052...    27   5.3  
01_01_1192 + 9511961-9512977,9513860-9514078                           26   7.1  
06_03_0620 - 22803769-22804867,22804959-22805311                       26   9.3  
02_02_0034 - 6246183-6246553,6246672-6249699                           26   9.3  

>10_01_0206 - 2206359-2209142
          Length = 927

 Score = 27.5 bits (58), Expect = 3.1
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 36  GAGLGTRVTVLVELDKEVDVQP 101
           GAG+G RV  L  LDK +D+ P
Sbjct: 854 GAGIGIRVLQLRHLDKLMDIPP 875


>09_02_0139 - 4875234-4876210,4877532-4877932,4878056-4878135
          Length = 485

 Score = 27.1 bits (57), Expect = 4.0
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -3

Query: 161 SESRPAEKIRRETQRADAWVRLHVD 87
           SES+P E  RR   R+ AW R+  D
Sbjct: 92  SESQPLETARRGALRSHAWARVGSD 116


>03_06_0507 +
           34404843-34404968,34405091-34405151,34405260-34405296,
           34405365-34405386,34405861-34405957,34406037-34406180,
           34407034-34407173,34408205-34408255,34408347-34408429,
           34408515-34408590,34408646-34408760,34409080-34409575,
           34409682-34409895,34410000-34410070,34410527-34410695,
           34410787-34410916,34411330-34411742,34411839-34412039
          Length = 881

 Score = 26.6 bits (56), Expect = 5.3
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -3

Query: 239 LTTARAPPKET*QLKSNCF-ANESTTGSESRPAEKIRRETQRADA 108
           L T RAP KE  Q K N   A ++   +E++ A+    E Q ADA
Sbjct: 98  LATHRAPLKERLQKKENAMQAKDADVTNEAKDADS-TNEAQDADA 141


>01_01_1192 + 9511961-9512977,9513860-9514078
          Length = 411

 Score = 26.2 bits (55), Expect = 7.1
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +1

Query: 124 VSRRIFSAGRDSDPVVDSFA--KQLLLSC*VSFGGARAVVSKSRPS 255
           VSR ++S G      + ++A  K +LL C V FGG  A     RP+
Sbjct: 222 VSREVWSVGMALQRYLPTWAVDKVVLLMCAVVFGGDTARYGLRRPA 267


>06_03_0620 - 22803769-22804867,22804959-22805311
          Length = 483

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 39  AGLGTRVTVLVELDKEVDVQPNPCISPLSFSPDL 140
           AG+G +V   V L+ +V V P+   S  +F PD+
Sbjct: 153 AGVGDKVKATVPLNADVYVSPDNKPSSGAFRPDI 186


>02_02_0034 - 6246183-6246553,6246672-6249699
          Length = 1132

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 45   LGTRVTVLVELDKEVDVQPNPCISPL 122
            LG R+ V +++   +D   N C+SPL
Sbjct: 929  LGERINVALDIAYALDYLHNQCVSPL 954


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,651,146
Number of Sequences: 37544
Number of extensions: 152568
Number of successful extensions: 423
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 423
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 506210712
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)