Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30955
         (349 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U26914-1|AAB19094.1|  755|Homo sapiens ras-responsive element bi...    28   9.3  

>U26914-1|AAB19094.1|  755|Homo sapiens ras-responsive element
           binding protein protein.
          Length = 755

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
 Frame = -3

Query: 299 LSSFTRTGGRAKAQPEGRDLLTTAR-----APPKET*QLKSNCFANESTTGSESRPAEKI 135
           LS   +  GR + + E  D  TTA      AP +E    ++     ES  G+   PAEK+
Sbjct: 476 LSRHRKAHGRQEPKDEKGDGATTAEEGPSPAPEQEEKPPETPAEVVESAPGAGEAPAEKL 535

Query: 134 RRETQ 120
             ET+
Sbjct: 536 AEETE 540


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,785,555
Number of Sequences: 237096
Number of extensions: 787285
Number of successful extensions: 2182
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2182
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2026198370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)