Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30955
         (349 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70308-6|CAA94344.1|  207|Caenorhabditis elegans Hypothetical pr...    29   1.2  
Z75531-12|CAA99806.4|  348|Caenorhabditis elegans Hypothetical p...    27   4.9  
AL132862-2|CAB70224.1| 1019|Caenorhabditis elegans Hypothetical ...    26   6.4  
AF016418-2|AAK18901.1|  893|Caenorhabditis elegans Hypothetical ...    26   6.4  

>Z70308-6|CAA94344.1|  207|Caenorhabditis elegans Hypothetical
           protein F49E11.10 protein.
          Length = 207

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 279 RWASKGSARGAGFANNCPSASEGDLTTQEQLF 184
           +W S  +A    +AN CP+   GD    E L+
Sbjct: 59  KWDSAVAASAQNYANGCPTGHSGDAGLGENLY 90


>Z75531-12|CAA99806.4|  348|Caenorhabditis elegans Hypothetical
           protein C54D10.6 protein.
          Length = 348

 Score = 26.6 bits (56), Expect = 4.9
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 21  SALILGAGLGTRVTVLVELDKEVDVQPNPCI 113
           S L+L AGLG  + +L +   ++ VQP  C+
Sbjct: 255 SVLVLPAGLGLFILLLTDTWDQMYVQPGLCL 285


>AL132862-2|CAB70224.1| 1019|Caenorhabditis elegans Hypothetical
           protein Y73F8A.5 protein.
          Length = 1019

 Score = 26.2 bits (55), Expect = 6.4
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +3

Query: 78  DKEVDVQPNPCISPLSFSPDLL 143
           D E+   P PC+S LSFS +L+
Sbjct: 143 DGELIYIPTPCVSKLSFSANLV 164


>AF016418-2|AAK18901.1|  893|Caenorhabditis elegans Hypothetical
           protein C49G7.7 protein.
          Length = 893

 Score = 26.2 bits (55), Expect = 6.4
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = -3

Query: 221 PPKET*QLKSNCFANESTTGSESRPAEKIRRETQRADAWVRLHVDLFVEFDE 66
           PPK   +L++N F   S+     R     RR  +  D W  L  +   + DE
Sbjct: 801 PPKNYEKLRNNDFNPVSSFRKGHRVISHWRRTDEMLDIWFALRYEELEDLDE 852


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,664,672
Number of Sequences: 27780
Number of extensions: 110211
Number of successful extensions: 339
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 339
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 461821634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)