Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30951
         (758 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    24   1.8  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   5.4  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   9.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   9.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   9.5  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = -2

Query: 598 QEENQLNRINIMSDDHKCAFFFSTSLVTVFCR 503
           ++E  L+ + ++S+D    FF +T +    CR
Sbjct: 438 EDETPLDPVVVISNDKSTEFFLATVVEEAACR 469


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -2

Query: 664 CPEAGFALDNAVW 626
           CP AG+ +++ VW
Sbjct: 512 CPVAGYPIESIVW 524


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 637 NAVWYTHFTA*RWQEENQLNRINIMSDD 554
           +AV YTH+       +N L  I+ + DD
Sbjct: 166 SAVRYTHYIGTLATNDNILESISYVKDD 193


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 667 KCPEAGFALDNAVW 626
           KCP AG+ ++   W
Sbjct: 539 KCPVAGYPIEEIKW 552


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 667 KCPEAGFALDNAVW 626
           KCP AG+ ++   W
Sbjct: 539 KCPVAGYPIEEIKW 552


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,003
Number of Sequences: 438
Number of extensions: 3474
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)