Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30947
         (578 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071155-1|AAL48777.1|  100|Drosophila melanogaster RE18615p pro...    67   2e-11
AJ249754-1|CAB56698.1|  100|Drosophila melanogaster sec61beta pr...    67   2e-11
AE013599-1924|AAF58229.1|  100|Drosophila melanogaster CG10130-P...    67   2e-11
AY060940-1|AAL28488.1|  641|Drosophila melanogaster GM08240p pro...    29   4.5  
AY118698-1|AAM50558.1|  570|Drosophila melanogaster AT19257p pro...    29   6.0  
AE014296-2960|AAN11700.1|  573|Drosophila melanogaster CG32181-P...    29   6.0  

>AY071155-1|AAL48777.1|  100|Drosophila melanogaster RE18615p
           protein.
          Length = 100

 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 30/44 (68%), Positives = 31/44 (70%)
 Frame = +3

Query: 255 GGMWRFYTDDSXXXXXXXXXXXXMSLLFIASVFMLHIWGKYTRA 386
           GGMWRFYTDDS            MSLLFIASVFMLHIWGKY R+
Sbjct: 57  GGMWRFYTDDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYNRS 100



 Score = 37.1 bits (82), Expect = 0.017
 Identities = 19/27 (70%), Positives = 22/27 (81%)
 Frame = +1

Query: 97  MPQSPSATSVGSGSRSPTKASAGPRTA 177
           MP   S+TSVGSGSRSP+K SA PR+A
Sbjct: 1   MPAPASSTSVGSGSRSPSKLSA-PRSA 26


>AJ249754-1|CAB56698.1|  100|Drosophila melanogaster sec61beta
           protein protein.
          Length = 100

 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 30/44 (68%), Positives = 31/44 (70%)
 Frame = +3

Query: 255 GGMWRFYTDDSXXXXXXXXXXXXMSLLFIASVFMLHIWGKYTRA 386
           GGMWRFYTDDS            MSLLFIASVFMLHIWGKY R+
Sbjct: 57  GGMWRFYTDDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYNRS 100



 Score = 37.1 bits (82), Expect = 0.017
 Identities = 19/27 (70%), Positives = 22/27 (81%)
 Frame = +1

Query: 97  MPQSPSATSVGSGSRSPTKASAGPRTA 177
           MP   S+TSVGSGSRSP+K SA PR+A
Sbjct: 1   MPAPASSTSVGSGSRSPSKLSA-PRSA 26


>AE013599-1924|AAF58229.1|  100|Drosophila melanogaster CG10130-PA
           protein.
          Length = 100

 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 30/44 (68%), Positives = 31/44 (70%)
 Frame = +3

Query: 255 GGMWRFYTDDSXXXXXXXXXXXXMSLLFIASVFMLHIWGKYTRA 386
           GGMWRFYTDDS            MSLLFIASVFMLHIWGKY R+
Sbjct: 57  GGMWRFYTDDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYNRS 100



 Score = 37.1 bits (82), Expect = 0.017
 Identities = 19/27 (70%), Positives = 22/27 (81%)
 Frame = +1

Query: 97  MPQSPSATSVGSGSRSPTKASAGPRTA 177
           MP   S+TSVGSGSRSP+K SA PR+A
Sbjct: 1   MPAPASSTSVGSGSRSPSKLSA-PRSA 26


>AY060940-1|AAL28488.1|  641|Drosophila melanogaster GM08240p
           protein.
          Length = 641

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 7/45 (15%)
 Frame = +3

Query: 174 SQW*YSPSTKIN-------YYYNCSQKPKHWCWFGGMWRFYTDDS 287
           +QW  SP T+ N       YYY   Q      W G +W+ Y D+S
Sbjct: 444 NQWLASPETRPNPDIRDVVYYYGLQQVNTEAAW-GQVWKLYLDES 487


>AY118698-1|AAM50558.1|  570|Drosophila melanogaster AT19257p
           protein.
          Length = 570

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 100 PQSPSATSVGSGSRSPTKASAGPRTASG 183
           PQ+P    V SG+R PT  S+   TA+G
Sbjct: 109 PQTPCELKVPSGNRCPTDQSSNHDTATG 136


>AE014296-2960|AAN11700.1|  573|Drosophila melanogaster CG32181-PA
           protein.
          Length = 573

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 100 PQSPSATSVGSGSRSPTKASAGPRTASG 183
           PQ+P    V SG+R PT  S+   TA+G
Sbjct: 109 PQTPCELKVPSGNRCPTDQSSNHDTATG 136


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,826,612
Number of Sequences: 53049
Number of extensions: 375966
Number of successful extensions: 789
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2296745289
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)