Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30889
         (358 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC062716-1|AAH62716.1|  140|Homo sapiens ribosomal protein L23 p...   118   5e-27
X55954-1|CAA39417.1|  140|Homo sapiens HL23 ribosomal protein pr...   118   7e-27
X52839-1|CAA37023.1|  140|Homo sapiens ribosomal protein L17 pro...   118   7e-27
BC106061-1|AAI06062.1|  140|Homo sapiens RPL23 protein protein.       118   7e-27
BC104651-1|AAI04652.1|  140|Homo sapiens ribosomal protein L23 p...   118   7e-27
BC010114-1|AAH10114.1|  140|Homo sapiens ribosomal protein L23 p...   118   7e-27
BC003518-1|AAH03518.1|  134|Homo sapiens Similar to ribosomal pr...   118   7e-27
AB061827-1|BAB79465.1|  140|Homo sapiens ribosomal protein L23 p...   118   7e-27
AY172136-1|AAO31738.1| 1906|Homo sapiens retinoic acid induced 1...    29   3.2  
AL834486-1|CAD39144.1|  568|Homo sapiens hypothetical protein pr...    29   3.2  
AL834468-1|CAD39127.1| 1285|Homo sapiens hypothetical protein pr...    29   3.2  
AB058723-1|BAB47449.1| 1644|Homo sapiens KIAA1820 protein protein.     29   3.2  
BC011924-1|AAH11924.1|  277|Homo sapiens unkempt-like protein.         28   7.4  
AL032819-2|CAM26346.1|  277|Homo sapiens unkempt-like (Drosophil...    28   7.4  
AL032819-1|CAM26345.1|  332|Homo sapiens unkempt-like (Drosophil...    28   7.4  
AL031721-4|CAM26441.1|  277|Homo sapiens unkempt-like (Drosophil...    28   7.4  
AL031721-3|CAM26440.1|  332|Homo sapiens unkempt-like (Drosophil...    28   7.4  
AE006467-5|AAK61279.1|  756|Homo sapiens Ce protein similar to D...    28   7.4  

>BC062716-1|AAH62716.1|  140|Homo sapiens ribosomal protein L23
           protein.
          Length = 140

 Score =  118 bits (284), Expect = 5e-27
 Identities = 53/58 (91%), Positives = 56/58 (96%)
 Frame = +3

Query: 3   KKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 176
           KKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 74  KKVRPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131


>X55954-1|CAA39417.1|  140|Homo sapiens HL23 ribosomal protein
           protein.
          Length = 140

 Score =  118 bits (283), Expect = 7e-27
 Identities = 53/58 (91%), Positives = 56/58 (96%)
 Frame = +3

Query: 3   KKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 176
           KKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 74  KKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131


>X52839-1|CAA37023.1|  140|Homo sapiens ribosomal protein L17
           protein.
          Length = 140

 Score =  118 bits (283), Expect = 7e-27
 Identities = 53/58 (91%), Positives = 56/58 (96%)
 Frame = +3

Query: 3   KKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 176
           KKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 74  KKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131


>BC106061-1|AAI06062.1|  140|Homo sapiens RPL23 protein protein.
          Length = 140

 Score =  118 bits (283), Expect = 7e-27
 Identities = 53/58 (91%), Positives = 56/58 (96%)
 Frame = +3

Query: 3   KKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 176
           KKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 74  KKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131


>BC104651-1|AAI04652.1|  140|Homo sapiens ribosomal protein L23
           protein.
          Length = 140

 Score =  118 bits (283), Expect = 7e-27
 Identities = 53/58 (91%), Positives = 56/58 (96%)
 Frame = +3

Query: 3   KKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 176
           KKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 74  KKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131


>BC010114-1|AAH10114.1|  140|Homo sapiens ribosomal protein L23
           protein.
          Length = 140

 Score =  118 bits (283), Expect = 7e-27
 Identities = 53/58 (91%), Positives = 56/58 (96%)
 Frame = +3

Query: 3   KKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 176
           KKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 74  KKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131


>BC003518-1|AAH03518.1|  134|Homo sapiens Similar to ribosomal
           protein L23 protein.
          Length = 134

 Score =  118 bits (283), Expect = 7e-27
 Identities = 53/58 (91%), Positives = 56/58 (96%)
 Frame = +3

Query: 3   KKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 176
           KKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 68  KKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 125


>AB061827-1|BAB79465.1|  140|Homo sapiens ribosomal protein L23
           protein.
          Length = 140

 Score =  118 bits (283), Expect = 7e-27
 Identities = 53/58 (91%), Positives = 56/58 (96%)
 Frame = +3

Query: 3   KKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 176
           KKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 74  KKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131


>AY172136-1|AAO31738.1| 1906|Homo sapiens retinoic acid induced 1
            protein.
          Length = 1906

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 175  RGHRSAHSLATGPVMAEPFISPLLLTMTP 89
            +G   AH L+ GP+   P++ P LL +TP
Sbjct: 1450 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 1477


>AL834486-1|CAD39144.1|  568|Homo sapiens hypothetical protein
           protein.
          Length = 568

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 175 RGHRSAHSLATGPVMAEPFISPLLLTMTP 89
           +G   AH L+ GP+   P++ P LL +TP
Sbjct: 112 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 139


>AL834468-1|CAD39127.1| 1285|Homo sapiens hypothetical protein
           protein.
          Length = 1285

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 175 RGHRSAHSLATGPVMAEPFISPLLLTMTP 89
           +G   AH L+ GP+   P++ P LL +TP
Sbjct: 829 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 856


>AB058723-1|BAB47449.1| 1644|Homo sapiens KIAA1820 protein protein.
          Length = 1644

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 175  RGHRSAHSLATGPVMAEPFISPLLLTMTP 89
            +G   AH L+ GP+   P++ P LL +TP
Sbjct: 1454 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 1481


>BC011924-1|AAH11924.1|  277|Homo sapiens unkempt-like protein.
          Length = 277

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +3

Query: 30  RQRKPFRRRDGVFIYFED 83
           R+R+P RRRDG F Y  D
Sbjct: 61  RRRRPLRRRDGTFNYSPD 78


>AL032819-2|CAM26346.1|  277|Homo sapiens unkempt-like (Drosophila)
           protein.
          Length = 277

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +3

Query: 30  RQRKPFRRRDGVFIYFED 83
           R+R+P RRRDG F Y  D
Sbjct: 61  RRRRPLRRRDGTFNYSPD 78


>AL032819-1|CAM26345.1|  332|Homo sapiens unkempt-like (Drosophila)
           protein.
          Length = 332

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +3

Query: 30  RQRKPFRRRDGVFIYFED 83
           R+R+P RRRDG F Y  D
Sbjct: 61  RRRRPLRRRDGTFNYSPD 78


>AL031721-4|CAM26441.1|  277|Homo sapiens unkempt-like (Drosophila)
           protein.
          Length = 277

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +3

Query: 30  RQRKPFRRRDGVFIYFED 83
           R+R+P RRRDG F Y  D
Sbjct: 61  RRRRPLRRRDGTFNYSPD 78


>AL031721-3|CAM26440.1|  332|Homo sapiens unkempt-like (Drosophila)
           protein.
          Length = 332

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +3

Query: 30  RQRKPFRRRDGVFIYFED 83
           R+R+P RRRDG F Y  D
Sbjct: 61  RRRRPLRRRDGTFNYSPD 78


>AE006467-5|AAK61279.1|  756|Homo sapiens Ce protein similar to Dm
           Cys3His finger protein protein.
          Length = 756

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +3

Query: 30  RQRKPFRRRDGVFIYFED 83
           R+R+P RRRDG F Y  D
Sbjct: 61  RRRRPLRRRDGTFNYSPD 78


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,668,490
Number of Sequences: 237096
Number of extensions: 780909
Number of successful extensions: 1336
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1336
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)